##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062542_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1085605 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.234845086380407 32.0 32.0 32.0 32.0 32.0 2 31.39431469088665 32.0 32.0 32.0 32.0 32.0 3 31.488657476706535 32.0 32.0 32.0 32.0 32.0 4 31.598874360379696 32.0 32.0 32.0 32.0 32.0 5 31.52512285776134 32.0 32.0 32.0 32.0 32.0 6 35.10696616172549 36.0 36.0 36.0 36.0 36.0 7 35.12545447008811 36.0 36.0 36.0 36.0 36.0 8 35.06522814467509 36.0 36.0 36.0 36.0 36.0 9 35.188696625384004 36.0 36.0 36.0 36.0 36.0 10 35.08067575223032 36.0 36.0 36.0 36.0 36.0 11 35.204358859806284 36.0 36.0 36.0 36.0 36.0 12 35.112663445728415 36.0 36.0 36.0 36.0 36.0 13 35.149693488884076 36.0 36.0 36.0 36.0 36.0 14 35.112280249261936 36.0 36.0 36.0 36.0 36.0 15 35.08172954251316 36.0 36.0 36.0 36.0 36.0 16 35.09848057074166 36.0 36.0 36.0 36.0 36.0 17 35.07575591490459 36.0 36.0 36.0 36.0 36.0 18 35.086950594369036 36.0 36.0 36.0 36.0 36.0 19 35.059118187554404 36.0 36.0 36.0 36.0 36.0 20 35.03579018151169 36.0 36.0 36.0 36.0 36.0 21 35.02374160030582 36.0 36.0 36.0 36.0 36.0 22 35.012924590435745 36.0 36.0 36.0 36.0 36.0 23 34.983342928597416 36.0 36.0 36.0 36.0 36.0 24 34.95547275482335 36.0 36.0 36.0 36.0 36.0 25 34.92625310310841 36.0 36.0 36.0 32.0 36.0 26 34.88942294849416 36.0 36.0 36.0 32.0 36.0 27 34.86648274464469 36.0 36.0 36.0 32.0 36.0 28 34.83383458992912 36.0 36.0 36.0 32.0 36.0 29 34.81243546225377 36.0 36.0 36.0 32.0 36.0 30 34.79402637239143 36.0 36.0 36.0 32.0 36.0 31 34.78464819156139 36.0 36.0 36.0 32.0 36.0 32 34.74403212954988 36.0 36.0 36.0 32.0 36.0 33 34.717405502001185 36.0 36.0 36.0 32.0 36.0 34 34.702878118652734 36.0 36.0 36.0 32.0 36.0 35 34.656140124630966 36.0 36.0 36.0 32.0 36.0 36 34.62213051708494 36.0 36.0 36.0 32.0 36.0 37 34.600111458587605 36.0 36.0 36.0 32.0 36.0 38 34.55803998691974 36.0 36.0 36.0 32.0 36.0 39 34.50160601692144 36.0 36.0 36.0 32.0 36.0 40 34.49955462622224 36.0 36.0 36.0 32.0 36.0 41 34.46752824461936 36.0 36.0 36.0 32.0 36.0 42 34.42645437336785 36.0 36.0 36.0 32.0 36.0 43 34.41064383454387 36.0 36.0 36.0 32.0 36.0 44 34.36806481178698 36.0 36.0 36.0 32.0 36.0 45 34.31267449947264 36.0 36.0 36.0 32.0 36.0 46 34.29894482799914 36.0 36.0 36.0 32.0 36.0 47 34.25513791848785 36.0 36.0 36.0 32.0 36.0 48 34.21465450140705 36.0 36.0 36.0 32.0 36.0 49 34.19373344816945 36.0 36.0 36.0 32.0 36.0 50 33.68314257948333 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 8.0 21 33.0 22 89.0 23 299.0 24 836.0 25 1912.0 26 3984.0 27 7380.0 28 12621.0 29 18857.0 30 26233.0 31 37456.0 32 53965.0 33 86459.0 34 186183.0 35 649287.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.28152114430382 18.024203875641902 11.439997936332162 26.25427704372212 2 15.698087344861033 20.671377603612516 37.924884782863025 25.705650268663426 3 18.823968312453943 24.696849668386143 28.620670596904933 27.85851142225497 4 12.068039605638525 15.901945738911923 36.57036688365821 35.459647771791346 5 13.637372709226653 37.53105411268371 34.00481759019164 14.826755587897992 6 33.79839020193404 35.87852638443923 17.013417440277376 13.30966597334935 7 29.541039328300812 30.7300537488313 21.165248870445513 18.563658052422383 8 27.573380741614123 34.13359371041953 19.587971683991874 18.705053863974467 9 27.430050524822562 13.876317813569392 18.787127914849325 39.90650374675872 10 15.444383546501719 27.247940088706297 32.70987145416611 24.59780491062587 11 37.02387148180047 20.980467112808064 22.913490634254632 19.08217077113683 12 24.553774162794017 23.761957618102347 29.853031259067524 21.83123696003611 13 30.072724425550728 20.065493434536503 25.369724715711516 24.492057424201253 14 22.806085086196177 20.369655629810108 25.779910741015378 31.04434854297834 15 24.612174778119115 28.614090760451543 22.890001427775296 23.883733033654046 16 24.629031738063105 26.084072936288983 25.654358629519947 23.632536696127964 17 23.069809000511235 26.51765605353697 26.428489183450704 23.984045762501093 18 23.929329728584523 24.961380981111915 28.314165833797745 22.79512345650582 19 24.925456312378813 25.556348764053222 26.082599103725574 23.43559581984239 20 25.021071199929995 24.838960763813724 26.66522353894833 23.474744497307952 21 25.55423012974332 24.710460987191475 25.08066930421286 24.654639578852343 22 24.80589164567223 25.809663735889206 25.77189677645184 23.612547841986725 23 23.345784148009635 25.45345682822021 26.429963016014113 24.770796007756044 24 24.153812850898806 25.588957309518655 26.483481560972916 23.773748278609624 25 24.211108091801346 25.311416214921636 26.3770892728018 24.10038642047522 26 23.055623362088422 26.114286503838873 26.96579326734862 23.864296866724086 27 24.230912716872158 25.997669502259107 26.093744962486355 23.677672818382376 28 23.308109303107482 25.694520566872846 26.420290989816735 24.57707914020293 29 23.545027887675534 25.591628631039836 26.386392840858324 24.476950640426306 30 23.597809516352633 25.623868718364413 26.904352872361493 23.873968892921457 31 24.216542849378918 25.301559959653837 26.003380603442324 24.47851658752493 32 23.49500969505483 26.0483324966263 26.056714919330698 24.399942888988168 33 23.106839043666895 25.703639905858942 26.85396622159994 24.335554828874223 34 23.733125768580653 25.929136288060572 27.164115861662392 23.173622081696383 35 24.37737482786096 25.762869552000957 26.614099971905063 23.24565564823301 36 23.2490638860359 26.068966152514033 26.667710631399082 24.014259330050987 37 24.21663496391413 25.771988890987053 25.79078025617052 24.220595888928294 38 23.582979076183328 26.15656707550168 26.087481174091863 24.17297267422313 39 24.195356506279907 25.44249519852985 26.01314474417491 24.349003551015333 40 24.836565785898184 25.409886653064422 26.457413147507612 23.296134413529785 41 23.84900585387871 25.432178370585984 27.050170181603804 23.668645593931494 42 24.48128002358132 26.34070403139263 26.422685967732278 22.755329977293766 43 23.536369121365507 25.519687179038414 26.54105314548109 24.402890554114986 44 23.101772744230175 26.052293421640467 26.553857065875707 24.292076768253644 45 23.27844842276887 26.29667328356078 26.22473183155936 24.20014646211099 46 23.266863423495124 25.386052372688383 26.561066466225252 24.78601773759124 47 24.122678137996786 25.256147493793783 26.679501291906355 23.941673076303076 48 23.77420885128569 26.483297331902488 25.57974585599735 24.162747960814475 49 23.48837744851949 25.879486553580723 26.2820270724619 24.350108925437887 50 22.88364552484559 27.15656246977492 25.573389953067643 24.386402052311844 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 40.0 1 45.0 2 50.0 3 179.5 4 309.0 5 321.5 6 334.0 7 304.0 8 274.0 9 362.0 10 450.0 11 664.5 12 879.0 13 1436.5 14 1994.0 15 2794.5 16 3595.0 17 4030.0 18 4465.0 19 4771.0 20 5077.0 21 5849.0 22 6621.0 23 7099.0 24 7577.0 25 8485.5 26 9394.0 27 11681.5 28 13969.0 29 16653.0 30 19337.0 31 21946.0 32 24555.0 33 29223.5 34 33892.0 35 39137.5 36 44383.0 37 48458.0 38 52533.0 39 53166.0 40 53799.0 41 56190.0 42 58581.0 43 59243.5 44 59906.0 45 64688.0 46 69470.0 47 74021.0 48 78572.0 49 78839.0 50 79106.0 51 74722.0 52 70338.0 53 68389.5 54 66441.0 55 66206.5 56 65972.0 57 63440.5 58 60909.0 59 55995.5 60 51082.0 61 45066.0 62 39050.0 63 33999.5 64 28949.0 65 25239.0 66 21529.0 67 18831.5 68 16134.0 69 14697.5 70 13261.0 71 10525.5 72 7790.0 73 6891.0 74 5992.0 75 4463.5 76 2935.0 77 2569.0 78 2203.0 79 1907.0 80 1611.0 81 1285.5 82 960.0 83 800.0 84 640.0 85 521.5 86 403.0 87 283.0 88 163.0 89 107.0 90 51.0 91 32.0 92 13.0 93 9.5 94 6.0 95 6.0 96 6.0 97 4.0 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014646211098880348 2 0.0042372686198018615 3 4.6057267606541976E-4 4 1.842290704261679E-4 5 0.0 6 2.763436056392518E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 9.211453521308395E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1085605.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.8964342147542 #Duplication Level Percentage of deduplicated Percentage of total 1 79.69166089503899 49.326296460542814 2 13.237506684092729 16.387089232786288 3 3.6183194890484702 6.718832226655549 4 1.341097172963321 3.3203653176766816 5 0.631526887282358 1.9544631216760482 6 0.3471088314758015 1.289087937168129 7 0.21376140497061558 0.9261748118291998 8 0.14239227265095786 0.7050859149463486 9 0.09063885638366428 0.5049199810306828 >10 0.5493843729624881 6.4765194680435245 >50 0.06869305444952462 3.0298519083263367 >100 0.06311290035755747 7.365399156354531 >500 0.004347442855702184 1.7067805965484648 >1k 4.497354678312605E-4 0.2891338664154081 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 9.211453521308395E-5 0.0 5 0.0 0.0 0.0 9.211453521308395E-5 0.0 6 0.0 0.0 0.0 9.211453521308395E-5 9.211453521308395E-5 7 0.0 0.0 0.0 9.211453521308395E-5 9.211453521308395E-5 8 0.0 0.0 0.0 9.211453521308395E-5 9.211453521308395E-5 9 0.0 0.0 0.0 9.211453521308395E-5 9.211453521308395E-5 10 0.0 0.0 0.0 9.211453521308395E-5 9.211453521308395E-5 11 0.0 0.0 0.0 9.211453521308395E-5 9.211453521308395E-5 12 0.0 0.0 0.0 9.211453521308395E-5 3.684581408523358E-4 13 0.0 0.0 0.0 1.842290704261679E-4 6.448017464915876E-4 14 0.0 0.0 0.0 1.842290704261679E-4 6.448017464915876E-4 15 0.0 0.0 0.0 1.842290704261679E-4 7.369162817046716E-4 16 0.0 0.0 0.0 2.763436056392518E-4 8.290308169177556E-4 17 0.0 0.0 0.0 2.763436056392518E-4 8.290308169177556E-4 18 0.0 0.0 0.0 2.763436056392518E-4 0.0011053744225570073 19 0.0 9.211453521308395E-5 0.0 3.684581408523358E-4 0.0011974889577700913 20 0.0 9.211453521308395E-5 0.0 6.448017464915876E-4 0.0011974889577700913 21 9.211453521308395E-5 9.211453521308395E-5 0.0 7.369162817046716E-4 0.0014738325634093433 22 9.211453521308395E-5 9.211453521308395E-5 0.0 0.002026519774687847 0.0014738325634093433 23 9.211453521308395E-5 9.211453521308395E-5 0.0 0.004145154084588778 0.0014738325634093433 24 9.211453521308395E-5 9.211453521308395E-5 0.0 0.0077376209578990515 0.0014738325634093433 25 9.211453521308395E-5 9.211453521308395E-5 0.0 0.009764140732586898 0.0014738325634093433 26 9.211453521308395E-5 9.211453521308395E-5 0.0 0.012527576788979417 0.0016580616338355112 27 9.211453521308395E-5 9.211453521308395E-5 0.0 0.01584370005665044 0.0016580616338355112 28 9.211453521308395E-5 9.211453521308395E-5 0.0 0.02422612276104108 0.0016580616338355112 29 9.211453521308395E-5 9.211453521308395E-5 0.0 0.03767484490215133 0.0016580616338355112 30 9.211453521308395E-5 9.211453521308395E-5 0.0 0.062085196733618585 0.0016580616338355112 31 9.211453521308395E-5 9.211453521308395E-5 0.0 0.10887938062186522 0.0016580616338355112 32 9.211453521308395E-5 9.211453521308395E-5 0.0 0.16442444535535486 0.001842290704261679 33 9.211453521308395E-5 9.211453521308395E-5 0.0 0.22697021476503884 0.001842290704261679 34 9.211453521308395E-5 9.211453521308395E-5 0.0 0.2982668650199658 0.002026519774687847 35 9.211453521308395E-5 9.211453521308395E-5 0.0 0.3770247926271526 0.002026519774687847 36 9.211453521308395E-5 9.211453521308395E-5 0.0 0.48525937150252624 0.002026519774687847 37 9.211453521308395E-5 9.211453521308395E-5 0.0 0.6509734203508643 0.002026519774687847 38 9.211453521308395E-5 9.211453521308395E-5 0.0 0.8684558379889554 0.0021186343099009308 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTAAT 170 0.0 22.004906 1 CTAACGG 50 0.0025796895 22.000853 3 TTAACGG 115 8.769348E-9 21.043324 35 GTCCTAC 905 0.0 20.181295 1 TCCTACA 925 0.0 19.979153 2 TCTAGCG 255 0.0 19.842993 28 CTAGCGG 255 0.0 19.842993 29 GCAATAC 275 0.0 19.19986 37 GCCGGTC 335 0.0 19.044636 8 TTAGGAC 790 0.0 18.380459 3 CGCAATA 290 0.0 18.206764 36 CCGGTCC 340 0.0 18.117514 9 GTCCTAA 560 0.0 18.075459 1 TAGCGGC 280 0.0 18.071297 30 TAGAGTA 110 2.7960868E-6 17.999868 4 TGTAGGA 1115 0.0 17.955853 2 GTAGGAC 1105 0.0 17.919245 3 ATACGAA 295 0.0 17.898174 40 TAGACTG 160 1.1004886E-9 17.874868 5 TAGGACG 1060 0.0 17.848927 4 >>END_MODULE