##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062541_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1256391 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.251038092440968 32.0 32.0 32.0 32.0 32.0 2 31.442839848422985 32.0 32.0 32.0 32.0 32.0 3 31.525798099476994 32.0 32.0 32.0 32.0 32.0 4 31.62924201144389 32.0 32.0 32.0 32.0 32.0 5 31.568561061007284 32.0 32.0 32.0 32.0 32.0 6 35.164674850424746 36.0 36.0 36.0 36.0 36.0 7 35.17700938640917 36.0 36.0 36.0 36.0 36.0 8 35.12733058418916 36.0 36.0 36.0 36.0 36.0 9 35.23471116873648 36.0 36.0 36.0 36.0 36.0 10 35.13152434234247 36.0 36.0 36.0 36.0 36.0 11 35.24466905605023 36.0 36.0 36.0 36.0 36.0 12 35.1623634680605 36.0 36.0 36.0 36.0 36.0 13 35.19359817126993 36.0 36.0 36.0 36.0 36.0 14 35.14898785489549 36.0 36.0 36.0 36.0 36.0 15 35.12173519230876 36.0 36.0 36.0 36.0 36.0 16 35.130988681071415 36.0 36.0 36.0 36.0 36.0 17 35.10018537222887 36.0 36.0 36.0 36.0 36.0 18 35.11486153593905 36.0 36.0 36.0 36.0 36.0 19 35.08385446887155 36.0 36.0 36.0 36.0 36.0 20 35.069043792895684 36.0 36.0 36.0 36.0 36.0 21 35.045482656275 36.0 36.0 36.0 36.0 36.0 22 35.017411777066215 36.0 36.0 36.0 36.0 36.0 23 34.96701982105889 36.0 36.0 36.0 36.0 36.0 24 34.942752694025984 36.0 36.0 36.0 32.0 36.0 25 34.912332227785775 36.0 36.0 36.0 32.0 36.0 26 34.86251732143894 36.0 36.0 36.0 32.0 36.0 27 34.82735868053815 36.0 36.0 36.0 32.0 36.0 28 34.80232984795338 36.0 36.0 36.0 32.0 36.0 29 34.76429391805576 36.0 36.0 36.0 32.0 36.0 30 34.74473472032194 36.0 36.0 36.0 32.0 36.0 31 34.73196401438724 36.0 36.0 36.0 32.0 36.0 32 34.68810824018956 36.0 36.0 36.0 32.0 36.0 33 34.6527577800223 36.0 36.0 36.0 32.0 36.0 34 34.618295578366926 36.0 36.0 36.0 32.0 36.0 35 34.54365639359085 36.0 36.0 36.0 32.0 36.0 36 34.51620395243201 36.0 36.0 36.0 32.0 36.0 37 34.46322999766792 36.0 36.0 36.0 32.0 36.0 38 34.404939226721616 36.0 36.0 36.0 32.0 36.0 39 34.306200060331534 36.0 36.0 36.0 32.0 36.0 40 34.23660627941461 36.0 36.0 36.0 32.0 36.0 41 34.23504307178259 36.0 36.0 36.0 32.0 36.0 42 34.1143704467797 36.0 36.0 36.0 32.0 36.0 43 34.12581752018281 36.0 36.0 36.0 32.0 36.0 44 34.09873916639008 36.0 36.0 36.0 32.0 36.0 45 33.948273268433155 36.0 36.0 36.0 32.0 36.0 46 34.03604689941268 36.0 36.0 36.0 32.0 36.0 47 33.93779325066799 36.0 36.0 36.0 32.0 36.0 48 33.926466362780374 36.0 36.0 36.0 32.0 36.0 49 33.94566977955111 36.0 36.0 36.0 32.0 36.0 50 33.384532362934785 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 13.0 21 14.0 22 134.0 23 345.0 24 993.0 25 2492.0 26 5200.0 27 10064.0 28 16862.0 29 24746.0 30 34213.0 31 46916.0 32 67994.0 33 98061.0 34 205196.0 35 743147.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.885571656128285 17.512802489410532 11.866413097903918 25.735212756557267 2 15.67640452300105 20.72824583271646 36.36007622176905 27.23527342251344 3 18.94037679382994 24.490086676907648 28.42525012137951 28.144286407882902 4 12.410656580610448 15.719745811007426 35.19302954182943 36.67656806655269 5 14.096407885761678 36.86742423337957 33.407912027386374 15.628255853472368 6 34.88362652878972 34.419915535512175 16.715006375429205 13.981451560268898 7 29.815423554787923 30.729072978931697 20.863028199842407 18.59247526643797 8 28.826456095276072 32.29185818745916 19.802991266253898 19.078694451010872 9 27.22695402943829 14.384057192386765 18.380344972226005 40.00864380594894 10 15.702277396129071 27.09451118322242 31.810956939360434 25.392254481288067 11 37.50416868634048 21.25214204813629 21.153048692644248 20.090640572878986 12 24.00502709745613 24.076740441470847 28.889732575289063 23.028499885783965 13 30.40884565394053 19.309593908265818 25.063933122730102 25.217627315063545 14 23.957191670427438 19.388231848206487 24.965635697804267 31.688940783561804 15 25.808446574354637 26.442882828673557 23.55015277887218 24.19851781809962 16 26.23307553142294 25.41223233849972 24.358181489679566 23.996510640397776 17 24.073556719206042 25.71826764120405 26.114561470115593 24.09361416947431 18 25.51976255799349 23.771421476276096 27.486745766246333 23.222070199484076 19 25.000099491320775 26.457050392751935 25.480761960249637 23.06208815567765 20 24.89790200662055 23.629507056322435 27.22846629751407 24.244124639542942 21 26.044201208063413 24.949637493423623 24.166839781564818 24.83932151694815 22 24.603009731843034 25.17170212139374 25.221925340121032 25.003362806642198 23 23.631258103568076 24.46642804668292 25.50647051753793 26.395843332211072 24 23.78248491114629 26.078426222410062 25.436587813825472 24.70250105261817 25 25.20139033151304 24.24579609373197 24.92623713477731 25.626576439977683 26 23.632531592474 24.962451975539462 26.107955246416125 25.297061185570413 27 25.660005523758127 25.23107854163234 25.29172845077687 23.81718748383266 28 24.383014523345043 23.895586644603473 26.09673262543269 25.6246662066188 29 23.89311925984825 25.392015702118208 26.58479724862722 24.130067789406322 30 25.083910979941752 24.568386752213282 26.432694917426186 23.91500735041878 31 23.988790113905623 24.96746633810653 25.36598877260343 25.677754775384415 32 23.938805674348192 25.30923892323329 25.505276621688633 25.246678780729887 33 23.681242543125506 24.5941749025582 26.058527958255034 25.66605459606126 34 23.982502262432632 25.3983035535912 26.640432795204678 23.97876138877149 35 25.73267398445229 24.74142205730541 25.75806416951411 23.76783978872819 36 24.237518415843475 25.721292177355615 25.596251485405418 24.44493792139549 37 25.531223958146786 25.21062312608097 25.589963633932427 23.668189281839812 38 24.365742830058476 25.148301762747426 25.204096495438122 25.28185891175597 39 24.451384958981716 24.9056225331127 25.729171889961005 24.913820617944573 40 25.32802288459564 25.06552498386251 25.183322707660277 24.42312942388158 41 23.430046856432433 25.328978001275082 26.43150102157688 24.809474120715606 42 25.94192413030657 25.50615214531145 25.431175485975306 23.120748238406673 43 24.797853534449068 23.90219286830294 25.334629108295108 25.965324488952884 44 24.253118654941016 24.857787106084015 26.421233517272885 24.46786072170208 45 24.73449746137946 25.023022291627367 25.617662017636228 24.624818229356944 46 23.85300435931171 24.758375378365493 26.504487854497526 24.88413240782527 47 24.829451977927253 24.210615962705877 26.761732613493727 24.19819944587314 48 24.669469934120826 26.802723037653088 24.56631733274116 23.961489695484925 49 23.566389762422684 25.055814630954853 26.806623097427472 24.571172509194987 50 23.58431697164097 26.835695922444465 24.42171618685281 25.158270919061753 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 12.0 1 18.5 2 25.0 3 80.5 4 136.0 5 155.0 6 174.0 7 201.5 8 229.0 9 308.0 10 387.0 11 613.5 12 840.0 13 1480.0 14 2120.0 15 3102.0 16 4084.0 17 4855.0 18 5626.0 19 6128.5 20 6631.0 21 7128.5 22 7626.0 23 7944.5 24 8263.0 25 8473.0 26 8683.0 27 10498.0 28 12313.0 29 14024.5 30 15736.0 31 17413.5 32 19091.0 33 22007.5 34 24924.0 35 28438.0 36 31952.0 37 38147.0 38 44342.0 39 47557.5 40 50773.0 41 56213.0 42 61653.0 43 65785.0 44 69917.0 45 81851.5 46 93786.0 47 103678.5 48 113571.0 49 110348.5 50 107126.0 51 97429.0 52 87732.0 53 84274.5 54 80817.0 55 81976.0 56 83135.0 57 80341.0 58 77547.0 59 70606.0 60 63665.0 61 55886.0 62 48107.0 63 42297.0 64 36487.0 65 31123.0 66 25759.0 67 22464.5 68 19170.0 69 17478.5 70 15787.0 71 12464.0 72 9141.0 73 8311.5 74 7482.0 75 5539.5 76 3597.0 77 3201.0 78 2805.0 79 2421.0 80 2037.0 81 1646.5 82 1256.0 83 1074.0 84 892.0 85 732.5 86 573.0 87 420.0 88 267.0 89 170.0 90 73.0 91 44.5 92 16.0 93 12.5 94 9.0 95 9.5 96 10.0 97 6.5 98 3.0 99 3.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015122680757821413 2 0.004536804227346423 3 7.959305662011269E-5 4 2.3877916986033806E-4 5 0.0 6 3.979652831005634E-4 7 7.959305662011269E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 7.959305662011269E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1256391.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.448975597030625 #Duplication Level Percentage of deduplicated Percentage of total 1 80.12180204060347 45.22793648180144 2 12.597467069017021 14.222282223266777 3 3.390917042280136 5.7424138011368004 4 1.3802648379049087 3.116581446093346 5 0.6883919623811976 1.9429510542824122 6 0.402969922153719 1.364834358119557 7 0.2638677085185742 1.0426543287306573 8 0.17081554357591672 0.7713889960728356 9 0.13464020942238308 0.6840271706456877 >10 0.6780858887650473 7.15520757953122 >50 0.07640748895037426 3.0738065131584955 >100 0.08287556898015616 9.659922578453592 >500 0.008514605516417605 3.2006669210713894 >1k 0.002838201838805868 2.3548192919988624 >5k 1.419100919402934E-4 0.4405072556368807 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 5499 0.4376822183539996 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 4703 0.37432614528439 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2169 0.1726373398090244 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2136 0.1700107689405607 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1420 0.11302214040056001 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1391 0.11071394175857674 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1325 0.10546080002164931 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1312 0.10442609028558783 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1282 0.10203829858698447 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1270 0.10108318190754312 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.959305662011269E-5 2 0.0 0.0 0.0 0.0 7.959305662011269E-5 3 0.0 0.0 0.0 0.0 7.959305662011269E-5 4 0.0 0.0 0.0 0.0 7.959305662011269E-5 5 0.0 0.0 0.0 0.0 7.959305662011269E-5 6 0.0 0.0 0.0 0.0 7.959305662011269E-5 7 0.0 0.0 0.0 0.0 7.959305662011269E-5 8 0.0 0.0 0.0 0.0 7.959305662011269E-5 9 0.0 0.0 0.0 0.0 7.959305662011269E-5 10 0.0 0.0 0.0 0.0 7.959305662011269E-5 11 0.0 0.0 0.0 0.0 7.959305662011269E-5 12 0.0 0.0 0.0 0.0 2.3877916986033806E-4 13 0.0 0.0 0.0 0.0 2.3877916986033806E-4 14 0.0 0.0 0.0 0.0 2.3877916986033806E-4 15 0.0 0.0 0.0 0.0 3.1837222648045075E-4 16 0.0 0.0 0.0 0.0 3.1837222648045075E-4 17 0.0 0.0 0.0 0.0 3.1837222648045075E-4 18 0.0 0.0 0.0 0.0 3.1837222648045075E-4 19 0.0 0.0 0.0 0.0 3.1837222648045075E-4 20 0.0 7.959305662011269E-5 0.0 1.5918611324022537E-4 3.9796528310056346E-4 21 0.0 7.959305662011269E-5 0.0 4.775583397206761E-4 3.9796528310056346E-4 22 0.0 7.959305662011269E-5 0.0 0.0015918611324022538 3.9796528310056346E-4 23 7.959305662011269E-5 7.959305662011269E-5 0.0 0.0028653500383240566 3.9796528310056346E-4 24 7.959305662011269E-5 7.959305662011269E-5 0.0 0.004536804227346423 3.9796528310056346E-4 25 7.959305662011269E-5 7.959305662011269E-5 0.0 0.00620825841636879 3.9796528310056346E-4 26 7.959305662011269E-5 7.959305662011269E-5 0.0 0.008516457058352057 3.9796528310056346E-4 27 7.959305662011269E-5 7.959305662011269E-5 0.0 0.011063434870195664 3.9796528310056346E-4 28 7.959305662011269E-5 7.959305662011269E-5 0.0 0.01719210022994434 3.9796528310056346E-4 29 7.959305662011269E-5 7.959305662011269E-5 0.0 0.030245361515642822 3.9796528310056346E-4 30 7.959305662011269E-5 7.959305662011269E-5 0.0 0.05388449933181629 3.9796528310056346E-4 31 7.959305662011269E-5 7.959305662011269E-5 0.0 0.10283422915318559 3.9796528310056346E-4 32 7.959305662011269E-5 7.959305662011269E-5 0.0 0.16420047580729247 3.9796528310056346E-4 33 7.959305662011269E-5 7.959305662011269E-5 0.0 0.21808497513910877 3.9796528310056346E-4 34 7.959305662011269E-5 7.959305662011269E-5 0.0 0.2937779719848359 4.775583397206761E-4 35 7.959305662011269E-5 7.959305662011269E-5 0.0 0.3647749784899765 4.775583397206761E-4 36 7.959305662011269E-5 7.959305662011269E-5 0.0 0.4801053175325197 4.775583397206761E-4 37 7.959305662011269E-5 7.959305662011269E-5 0.0 0.6581549851917118 4.775583397206761E-4 38 7.959305662011269E-5 7.959305662011269E-5 0.0 0.8667683865930271 4.775583397206761E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTATA 40 1.8202194E-5 32.99976 44 CGATATG 90 4.082358E-7 21.999842 38 GTCGATA 80 3.6159581E-6 21.99984 36 GGCGAAC 55 0.004483897 19.999855 21 TCGATAT 90 1.0020733E-5 19.555414 37 GATATAC 175 9.094947E-12 18.86226 1 GTCGTAT 105 1.7929269E-6 18.857006 43 CTATGCG 165 8.185452E-11 18.666533 38 CGATGAT 165 8.185452E-11 18.666533 43 TATGGCG 295 0.0 18.643932 16 GTAGGAC 485 0.0 18.597803 3 TGTAGGA 510 0.0 18.549623 2 TGCGCTA 60 0.0074125705 18.3332 21 GCGAGAA 265 0.0 18.264019 20 GTATTAG 375 0.0 18.191603 1 TAGGACG 260 0.0 17.769102 4 GCGAAAG 500 0.0 17.599873 18 CAGAGCG 510 0.0 17.254776 14 GAGCGAA 530 0.0 17.018744 16 AGCGAAA 520 0.0 16.922955 17 >>END_MODULE