##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062540_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1174662 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.90094256901134 32.0 32.0 32.0 32.0 32.0 2 30.658143363793158 32.0 32.0 32.0 32.0 32.0 3 30.685054083642783 32.0 32.0 32.0 32.0 32.0 4 30.689472375883447 32.0 32.0 32.0 32.0 32.0 5 30.571533768862874 32.0 32.0 32.0 32.0 32.0 6 34.14946767665933 36.0 36.0 36.0 32.0 36.0 7 33.948481350379936 36.0 36.0 36.0 32.0 36.0 8 33.91520113871054 36.0 36.0 36.0 32.0 36.0 9 34.01954179159622 36.0 36.0 36.0 32.0 36.0 10 33.77305386570775 36.0 36.0 36.0 32.0 36.0 11 34.135295089140534 36.0 36.0 36.0 32.0 36.0 12 33.9146043713 36.0 36.0 36.0 32.0 36.0 13 34.02592405304675 36.0 36.0 36.0 32.0 36.0 14 33.94594104516874 36.0 36.0 36.0 32.0 36.0 15 33.934182769171045 36.0 36.0 36.0 32.0 36.0 16 33.90506545712724 36.0 36.0 36.0 32.0 36.0 17 33.832509266495386 36.0 36.0 36.0 32.0 36.0 18 33.87668027057996 36.0 36.0 36.0 32.0 36.0 19 33.838041070537734 36.0 36.0 36.0 32.0 36.0 20 33.76513073547965 36.0 36.0 36.0 32.0 36.0 21 33.724932789176805 36.0 36.0 36.0 27.0 36.0 22 33.69312619289634 36.0 36.0 36.0 27.0 36.0 23 33.69895765760704 36.0 36.0 36.0 27.0 36.0 24 33.701652901004714 36.0 36.0 36.0 27.0 36.0 25 33.219725333755584 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 10.0 4 50.0 5 100.0 6 222.0 7 63.0 8 185.0 9 204.0 10 145.0 11 44.0 12 106.0 13 65.0 14 417.0 15 473.0 16 624.0 17 907.0 18 1382.0 19 1843.0 20 2724.0 21 3951.0 22 5492.0 23 7656.0 24 10022.0 25 12836.0 26 16539.0 27 20587.0 28 26839.0 29 34349.0 30 43430.0 31 57332.0 32 80798.0 33 115707.0 34 253450.0 35 476108.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.54275086606826 17.382749810354678 11.37335566224317 24.701143661333894 2 15.888875267323227 20.75007151321973 37.909923991663604 25.451129227793444 3 19.23025514282771 25.629726621130484 28.16753320500563 26.972485031036175 4 12.265992781504712 15.84152346181256 35.717247503795285 36.17523625288744 5 13.893494732306111 37.628903292617395 33.19375285824875 15.28384911682775 6 32.945034260430376 35.13293217329092 17.929809768374792 13.992223797903918 7 29.265872001690198 31.404430632085788 21.14841356655319 18.18128379967082 8 28.482166213497596 32.2611787622051 20.082448084377212 19.17420693992009 9 27.72036510426742 14.565482120168083 19.131330673990796 38.582822101573704 10 15.918935828175051 27.596203185491913 31.792099175413448 24.692761810919592 11 36.06484855458811 22.052429476770698 22.207987589445917 19.674734379195275 12 24.425811093512102 24.70192984759336 29.288621247589607 21.58363781130493 13 29.826577179377466 20.32292819139415 25.59073373553744 24.25976089369094 14 23.572568354080786 20.078574375445378 26.41814046895724 29.930716801516592 15 24.836376250670135 27.16149977285725 24.453855929278063 23.548268047194554 16 24.458977215293444 26.645057858818856 25.202103151232393 23.693861774655307 17 22.820426926201247 26.368229175989644 26.51526581240512 24.296078085403995 18 23.864162369563125 25.28734260410868 28.061329307453814 22.78716571887438 19 24.23179184493563 26.45447439107244 26.731094965676032 22.582638798315894 20 24.801009231398687 24.457069307943435 27.346505621521178 23.3954158391367 21 25.8458957475901 24.872472030797663 25.520767622899115 23.760864598713127 22 24.608339173926908 25.432843405586166 26.054333720432528 23.9044837000544 23 23.20328944732272 25.501145389922787 26.502626255048114 24.79293890770638 24 23.25489009279348 26.596648863844642 26.596819361741126 23.55164168162075 25 23.91188523017985 25.64870880542444 26.33290169905913 24.106504265336586 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 580.0 1 580.0 2 1152.5 3 1725.0 4 1725.0 5 1725.0 6 4438.5 7 7152.0 8 7152.0 9 7152.0 10 6822.5 11 6493.0 12 6493.0 13 6493.0 14 5649.0 15 4805.0 16 4805.0 17 4805.0 18 7542.0 19 10279.0 20 10279.0 21 10279.0 22 15802.0 23 21325.0 24 21325.0 25 21325.0 26 30697.0 27 40069.0 28 40069.0 29 40069.0 30 48850.0 31 57631.0 32 57631.0 33 57631.0 34 67594.0 35 77557.0 36 77557.0 37 77557.0 38 86345.0 39 95133.0 40 95133.0 41 95133.0 42 109094.5 43 123056.0 44 123056.0 45 123056.0 46 148514.5 47 173973.0 48 173973.0 49 173973.0 50 166240.5 51 158508.0 52 158508.0 53 158508.0 54 140701.0 55 122894.0 56 122894.0 57 122894.0 58 110974.5 59 99055.0 60 99055.0 61 99055.0 62 87013.0 63 74971.0 64 74971.0 65 74971.0 66 61195.0 67 47419.0 68 47419.0 69 47419.0 70 36081.0 71 24743.0 72 24743.0 73 24743.0 74 18964.5 75 13186.0 76 13186.0 77 13186.0 78 10772.5 79 8359.0 80 8359.0 81 8359.0 82 5736.5 83 3114.0 84 3114.0 85 3114.0 86 2264.5 87 1415.0 88 1415.0 89 1415.0 90 966.0 91 517.0 92 517.0 93 517.0 94 316.0 95 115.0 96 115.0 97 115.0 98 351.5 99 588.0 100 588.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008598218040593806 2 0.004597067071208569 3 0.005533506659788092 4 0.015238426032339514 5 0.03652114395460141 6 0.04826920424768997 7 0.07099914698866568 8 0.09151568706572615 9 0.10122060643827757 10 0.12497211963952183 11 0.12488698876783279 12 0.1375714886495009 13 0.12429107266600946 14 0.12820709276370565 15 0.11841704251946517 16 0.11705494857244042 17 0.12641934445823563 18 0.13493243162714041 19 0.13408112291024993 20 0.12701526056005896 21 0.13501756249882946 22 0.15630028042109134 23 0.14463735099969183 24 0.13850792823808042 25 0.13629452557416516 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1174662.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.313194643210224 #Duplication Level Percentage of deduplicated Percentage of total 1 76.3553193794963 41.47101323503064 2 14.650327390036555 15.91412166243619 3 4.565222300588631 7.438554222041831 4 1.806109095497252 3.9238221940245843 5 0.8365534088236495 2.271794406143995 6 0.44102969879435416 1.4372239124432484 7 0.2633995584426097 1.0014250040640362 8 0.1664554223617091 0.7232580603319421 9 0.12127896068440444 0.5928343018000468 >10 0.629263287841554 6.559457395041599 >50 0.07876790769739926 3.0503430784988845 >100 0.07637334519559948 8.32304489760049 >500 0.006443016287995366 2.3664533068582667 >1k 0.0029857880359002915 3.4334313343066976 >5k 4.714402161947829E-4 1.4932229893776734 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 6608 0.5625448001212263 No Hit GTACATGGAAGCAGTGGTATCAACG 5594 0.4762220962285321 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 5293 0.45059770385012876 No Hit TCCATGTACTCTGCGTTGATACCAC 4649 0.3957734224823822 No Hit TATCAACGCAGAGTACTTTTTTTTT 4616 0.3929641037166436 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 3631 0.30911019510293175 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2785 0.2370894776539975 No Hit GTACATGGGGTGGTATCAACGCAAA 2764 0.2353017293485275 No Hit GAGTACATGGAAGCAGTGGTATCAA 2368 0.20158990415966466 No Hit GGTATCAACGCAGAGTACTTTTTTT 2323 0.19775901493365752 No Hit CATGTACTCTGCGTTGATACCACTG 2117 0.1802220553657137 No Hit GTACATGGGTGGTATCAACGCAAAA 1624 0.13825253562301326 No Hit CCCATGTACTCTGCGTTGATACCAC 1571 0.13374059942349373 No Hit GCTTCCATGTACTCTGCGTTGATAC 1536 0.13076101891437708 No Hit GTACATGGGAAGCAGTGGTATCAAC 1454 0.12378028743587517 No Hit GCGTTGATACCACTGCTTCCATGTA 1309 0.11143631104096327 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 1298 0.11049987145238375 No Hit GTACATGGGAGTGGTATCAACGCAA 1291 0.10990395535056043 No Hit GTATCAACGCAGAGTACATGGGGTG 1275 0.10854186140353565 No Hit CATGGAAGCAGTGGTATCAACGCAG 1273 0.10837159966015757 No Hit GTATCAACGCAGAGTACATGGGAAG 1273 0.10837159966015757 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 8.513087168904757E-5 0.0 5 0.0 0.0 0.0 8.513087168904757E-5 0.0 6 0.0 0.0 0.0 8.513087168904757E-5 0.0 7 0.0 0.0 0.0 1.7026174337809514E-4 0.0 8 0.0 0.0 0.0 1.7026174337809514E-4 0.0 9 0.0 0.0 0.0 2.5539261506714274E-4 0.0 10 0.0 0.0 0.0 5.107852301342855E-4 0.0 11 0.0 0.0 0.0 5.107852301342855E-4 0.0 12 0.0 0.0 0.0 5.107852301342855E-4 8.513087168904757E-5 13 0.0 0.0 0.0 5.107852301342855E-4 8.513087168904757E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCGCG 40 0.005272661 14.252207 9 CGCGCTA 65 5.4379947E-5 13.157006 16 TCGGCGT 110 2.737579E-9 12.955999 13 GAGCGAA 185 0.0 12.840921 16 ATCGCCA 120 7.366907E-10 12.669709 16 CGAAAGC 195 0.0 12.668088 19 GTCGGCG 105 1.9883373E-8 12.668088 12 CGCATCG 120 7.385097E-10 12.668087 13 CTATACC 90 5.407783E-7 12.665387 4 CGCAAGA 185 0.0 12.317304 2 GCGTTAT 70 1.09889654E-4 12.204207 1 AGAATTT 235 0.0 12.130054 17 GCGAAAG 190 0.0 12.002369 18 AGCGAAA 190 0.0 12.002369 17 TTAATCC 95 1.0403073E-6 11.998789 4 CGGTTCT 170 1.8189894E-12 11.736611 12 CAAGACG 195 0.0 11.691128 4 ATTTACC 65 8.0420094E-4 11.688636 3 CAGAGCG 230 0.0 11.567994 14 GAATTTC 230 0.0 11.567501 18 >>END_MODULE