##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062538_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 837063 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18595494007022 32.0 32.0 32.0 32.0 32.0 2 31.386152535711172 32.0 32.0 32.0 32.0 32.0 3 31.491247373256254 32.0 32.0 32.0 32.0 32.0 4 31.603402611272987 32.0 32.0 32.0 32.0 32.0 5 31.528307905139755 32.0 32.0 32.0 32.0 32.0 6 35.126842304581615 36.0 36.0 36.0 36.0 36.0 7 35.13303538682273 36.0 36.0 36.0 36.0 36.0 8 35.084340127326136 36.0 36.0 36.0 36.0 36.0 9 35.193342675521436 36.0 36.0 36.0 36.0 36.0 10 35.086461831427265 36.0 36.0 36.0 36.0 36.0 11 35.20978827161157 36.0 36.0 36.0 36.0 36.0 12 35.117216983667895 36.0 36.0 36.0 36.0 36.0 13 35.163463204083804 36.0 36.0 36.0 36.0 36.0 14 35.12243403423637 36.0 36.0 36.0 36.0 36.0 15 35.0956391573872 36.0 36.0 36.0 36.0 36.0 16 35.10275929051935 36.0 36.0 36.0 36.0 36.0 17 35.083312725565456 36.0 36.0 36.0 36.0 36.0 18 35.08982239090726 36.0 36.0 36.0 36.0 36.0 19 35.06955270989161 36.0 36.0 36.0 36.0 36.0 20 35.054496495484806 36.0 36.0 36.0 36.0 36.0 21 35.044011024259824 36.0 36.0 36.0 36.0 36.0 22 35.031327391128265 36.0 36.0 36.0 36.0 36.0 23 34.99386784507259 36.0 36.0 36.0 36.0 36.0 24 34.97332578312505 36.0 36.0 36.0 36.0 36.0 25 34.9627387663772 36.0 36.0 36.0 36.0 36.0 26 34.909366439563094 36.0 36.0 36.0 32.0 36.0 27 34.897711402845424 36.0 36.0 36.0 32.0 36.0 28 34.875437093743244 36.0 36.0 36.0 32.0 36.0 29 34.8506468449806 36.0 36.0 36.0 32.0 36.0 30 34.82488534315816 36.0 36.0 36.0 32.0 36.0 31 34.817422344554714 36.0 36.0 36.0 32.0 36.0 32 34.78874708355285 36.0 36.0 36.0 32.0 36.0 33 34.751243335328404 36.0 36.0 36.0 32.0 36.0 34 34.72693572646264 36.0 36.0 36.0 32.0 36.0 35 34.68122829464449 36.0 36.0 36.0 32.0 36.0 36 34.65197123752932 36.0 36.0 36.0 32.0 36.0 37 34.64200424579751 36.0 36.0 36.0 32.0 36.0 38 34.59596470038695 36.0 36.0 36.0 32.0 36.0 39 34.575571970090664 36.0 36.0 36.0 32.0 36.0 40 34.55586138677734 36.0 36.0 36.0 32.0 36.0 41 34.52082579208494 36.0 36.0 36.0 32.0 36.0 42 34.48708520147229 36.0 36.0 36.0 32.0 36.0 43 34.468121276415275 36.0 36.0 36.0 32.0 36.0 44 34.41997555739532 36.0 36.0 36.0 32.0 36.0 45 34.35758837745785 36.0 36.0 36.0 32.0 36.0 46 34.34261101016291 36.0 36.0 36.0 32.0 36.0 47 34.2933685994961 36.0 36.0 36.0 32.0 36.0 48 34.249871276116615 36.0 36.0 36.0 32.0 36.0 49 34.230274184858246 36.0 36.0 36.0 32.0 36.0 50 33.71301682191185 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 9.0 21 36.0 22 96.0 23 270.0 24 668.0 25 1520.0 26 3181.0 27 5703.0 28 9485.0 29 14074.0 30 19627.0 31 28112.0 32 40440.0 33 64720.0 34 139493.0 35 509626.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.44869264334087 17.947418980209235 11.518526660899736 26.08536171555016 2 15.826742491218848 20.7705909058326 37.29289622709135 26.109770375857206 3 19.17931612863147 24.707367948218643 28.375333608901656 27.73798231424824 4 12.367303736162913 15.839447973985202 36.04213307974797 35.75111521010391 5 13.972902875888673 37.26171148408184 33.58086547846458 15.1845201615649 6 33.79104698712994 35.55472194910992 16.989722349320658 13.664508714439483 7 29.57423754245499 30.72839200872575 21.016817133238476 18.680553315580788 8 27.939713020405872 33.182090236935565 19.68071698307057 19.19747975958799 9 27.53018589998602 14.090337286440805 18.699667766942273 39.6798090466309 10 15.524279534515323 27.368429855339443 32.42802513072493 24.679265479420305 11 37.165900296632394 21.437812924475217 22.191400169401827 19.204886609490565 12 24.235212881228772 24.163533688623197 29.489775560501418 22.11147786964661 13 29.80289416686677 19.889064502910774 25.380885309707875 24.927156020514584 14 23.078788573858837 19.821566596540524 25.942491783772546 31.15715304582809 15 24.861569559280483 27.54488013447017 23.26372089078122 24.329829415468133 16 24.920824358501093 26.114880241988953 24.90601065869594 24.058284740814013 17 23.37135914501059 25.954557781194488 26.204957094029957 24.469125979764964 18 24.112402531231222 25.209930435343576 27.395906879171577 23.28176015425362 19 24.91915184400696 25.464749965056395 26.214155923747672 23.401942267188968 20 25.016277149987516 24.681535320519483 26.58832130914877 23.713866220344226 21 25.99983513785701 24.65680599907056 25.37323952916328 23.970119333909157 22 24.77615185475884 25.139684826590113 25.89374993280076 24.190413385850288 23 23.977167787848703 24.833136812880273 26.261464190867358 24.928231208403666 24 23.9783624410588 25.52257118042489 26.28738816552637 24.21167821298994 25 24.36327970535073 25.039453422263318 26.28786602681041 24.309400845575542 26 23.618652359499823 25.50297886777937 26.85532630160454 24.02304247111627 27 24.33998396775392 25.70153023129681 26.146060690772376 23.812425110176893 28 23.738715007114163 25.354961335048852 26.520106610852466 24.386217046984516 29 23.712313171171107 25.379451725855763 26.59405564455722 24.314179458415914 30 23.944434289892158 25.58146758368247 26.658805848544255 23.815292277881113 31 24.049563772380335 25.350421652850503 26.101500126035916 24.49851444873325 32 23.717211249332486 25.65111586583089 26.133397366745392 24.49827551809123 33 23.637647345540298 25.23943836963287 26.54196876459717 24.580945520229662 34 23.915284751565892 25.556379866270518 26.81972563594377 23.708609746219818 35 24.58632145967508 25.430702348568744 26.438033935319087 23.54494225643709 36 23.651863718740408 25.84464968586594 26.27914505837673 24.224341537016926 37 24.423729157781434 25.576211109558063 25.95897799807183 24.041081734588676 38 23.875383334348786 25.517075775658466 26.22896962355283 24.378571266439923 39 24.0401260120206 25.37921279521374 26.16792284451708 24.412738348248578 40 24.63171828165861 25.339430843317643 26.321913643298057 23.70693723172569 41 23.633585524625982 25.556977192875568 26.824743179426157 23.98469410307229 42 24.492421717361776 25.876905322538445 26.231836791257052 23.398836168842728 43 23.58030399145584 25.183409134079515 26.601462494459792 24.63482438000485 44 23.402897989757044 25.675367325995772 26.41999467184668 24.5017400124005 45 23.558680768353156 25.77894375931083 26.328364770632557 24.334010701703455 46 23.40026975269484 25.354841869727846 26.404942041399515 24.839946336177803 47 23.78231984928255 25.34886860367738 26.578166756862988 24.290644790177083 48 23.91695726606002 26.031015586640432 25.727334740634817 24.32469240666473 49 23.31963066101357 25.84990615999035 26.289777471946557 24.54068570704953 50 23.12597737565751 26.441737360270373 25.805226129932873 24.627059134139245 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 47.0 1 51.0 2 55.0 3 186.5 4 318.0 5 362.0 6 406.0 7 320.5 8 235.0 9 342.5 10 450.0 11 671.0 12 892.0 13 1419.5 14 1947.0 15 2648.0 16 3349.0 17 3691.5 18 4034.0 19 4313.5 20 4593.0 21 5091.5 22 5590.0 23 6013.5 24 6437.0 25 7062.0 26 7687.0 27 9264.0 28 10841.0 29 12162.5 30 13484.0 31 14978.0 32 16472.0 33 18862.0 34 21252.0 35 24350.0 36 27448.0 37 30996.5 38 34545.0 39 36261.5 40 37978.0 41 41042.5 42 44107.0 43 45535.5 44 46964.0 45 51298.5 46 55633.0 47 58354.0 48 61075.0 49 61982.0 50 62889.0 51 60489.0 52 58089.0 53 56327.5 54 54566.0 55 54359.5 56 54153.0 57 52187.5 58 50222.0 59 45828.0 60 41434.0 61 36328.0 62 31222.0 63 27349.5 64 23477.0 65 20102.5 66 16728.0 67 14581.5 68 12435.0 69 11103.0 70 9771.0 71 7677.5 72 5584.0 73 4923.0 74 4262.0 75 3182.0 76 2102.0 77 1849.0 78 1596.0 79 1353.0 80 1110.0 81 900.0 82 690.0 83 559.0 84 428.0 85 343.5 86 259.0 87 206.5 88 154.0 89 91.0 90 28.0 91 20.0 92 12.0 93 8.0 94 4.0 95 3.5 96 3.0 97 3.5 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012782789347994117 2 0.005137008803399505 3 5.973266050464541E-4 4 1.1946532100929081E-4 5 0.0 6 4.7786128403716325E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 837063.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.81964110587676 #Duplication Level Percentage of deduplicated Percentage of total 1 82.16259875906327 54.07912762647701 2 11.898880819399862 15.663601301889992 3 2.934094040837089 5.7936305021636665 4 1.0572812202414275 2.783594818570968 5 0.5156008675179018 1.69683320269535 6 0.2911135022698835 1.1496591744287143 7 0.1895584088916248 0.8733666509293448 8 0.1363382637594456 0.7178988471716058 9 0.10606943418064811 0.6283306881066308 >10 0.5925744530662146 7.267801942320211 >50 0.06606839144739113 3.1001943995088936 >100 0.04836185870017347 5.67359261491834 >500 0.001459980625123125 0.5723682308192638 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 1.1946532100929081E-4 0.0 14 0.0 0.0 0.0 3.5839596302787247E-4 0.0 15 0.0 0.0 0.0 4.7786128403716325E-4 0.0 16 0.0 0.0 0.0 4.7786128403716325E-4 0.0 17 0.0 0.0 0.0 4.7786128403716325E-4 0.0 18 0.0 0.0 0.0 7.167919260557449E-4 0.0 19 0.0 0.0 0.0 9.557225680743265E-4 0.0 20 0.0 0.0 0.0 0.0017919798151393622 0.0 21 0.0 0.0 0.0 0.002389306420185816 0.0 22 0.0 0.0 0.0 0.0037034249512880152 0.0 23 0.0 0.0 0.0 0.006690057976520286 0.0 24 0.0 0.0 0.0 0.010632413569826882 0.0 25 0.0 0.0 0.0 0.014335838521114898 0.0 26 0.0 0.0 0.0 0.01911445136148653 0.0 27 0.0 0.0 0.0 0.024131994843876747 0.0 28 0.0 0.0 0.0 0.03751211079691732 0.0 29 0.0 0.0 0.0 0.051609018676013634 0.0 30 0.0 0.0 0.0 0.08398412066953144 0.0 31 0.0 0.0 0.0 0.14789806740950204 0.0 32 0.0 0.0 0.0 0.22447533817645746 0.0 33 0.0 0.0 0.0 0.3018888661904779 0.0 34 0.0 0.0 0.0 0.3928019754785482 0.0 35 0.0 0.0 0.0 0.49745359668268696 0.0 36 0.0 0.0 0.0 0.6374669529055758 0.0 37 0.0 0.0 0.0 0.8364961777070543 0.0 38 0.0 0.0 0.0 1.0981252307174012 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTTC 30 0.005744132 29.333214 10 TACTAGA 80 3.6134716E-6 21.99991 2 CGAATGT 145 2.9467628E-10 19.724058 33 TATACTG 145 2.9467628E-10 19.724058 5 CGTCTTA 90 1.0013915E-5 19.555475 15 TAGGACG 305 0.0 18.754023 4 ATACACT 295 0.0 18.643993 4 ACGAACG 110 2.7944498E-6 17.999928 15 TTACCGC 160 1.1004886E-9 17.874928 28 TTAATCC 125 4.84828E-7 17.599928 4 AATCCCG 140 8.3633495E-8 17.285645 19 GGCTAAT 90 2.2113859E-4 17.114109 1 ATAACGC 180 2.8558134E-10 17.111042 3 CGCAATA 155 1.4371835E-8 17.032188 36 GTATAGA 130 7.296785E-7 16.926043 1 GATATAC 250 0.0 16.722929 1 ACCGTCG 145 1.2479177E-7 16.689589 8 TATGGCG 330 0.0 16.6666 16 TAGCGGC 160 2.1263986E-8 16.499933 30 TCTAGCG 160 2.1263986E-8 16.499933 28 >>END_MODULE