##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062537_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1143066 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.252474485287813 32.0 32.0 32.0 32.0 32.0 2 31.468349159191156 32.0 32.0 32.0 32.0 32.0 3 31.5450227720884 32.0 32.0 32.0 32.0 32.0 4 31.63542962523599 32.0 32.0 32.0 32.0 32.0 5 31.584148246907876 32.0 32.0 32.0 32.0 32.0 6 35.19621876602051 36.0 36.0 36.0 36.0 36.0 7 35.20506514934396 36.0 36.0 36.0 36.0 36.0 8 35.154160827108846 36.0 36.0 36.0 36.0 36.0 9 35.25359428064521 36.0 36.0 36.0 36.0 36.0 10 35.155132774485466 36.0 36.0 36.0 36.0 36.0 11 35.261305121489045 36.0 36.0 36.0 36.0 36.0 12 35.17970090965876 36.0 36.0 36.0 36.0 36.0 13 35.21091433040612 36.0 36.0 36.0 36.0 36.0 14 35.16670340995183 36.0 36.0 36.0 36.0 36.0 15 35.14817779550787 36.0 36.0 36.0 36.0 36.0 16 35.15677135003578 36.0 36.0 36.0 36.0 36.0 17 35.12988488853662 36.0 36.0 36.0 36.0 36.0 18 35.14045120754182 36.0 36.0 36.0 36.0 36.0 19 35.10956847636095 36.0 36.0 36.0 36.0 36.0 20 35.093154725973825 36.0 36.0 36.0 36.0 36.0 21 35.077523957496766 36.0 36.0 36.0 36.0 36.0 22 35.06049956870382 36.0 36.0 36.0 36.0 36.0 23 35.01719498261693 36.0 36.0 36.0 36.0 36.0 24 34.99195934442981 36.0 36.0 36.0 36.0 36.0 25 34.968346534670786 36.0 36.0 36.0 36.0 36.0 26 34.9256210927453 36.0 36.0 36.0 32.0 36.0 27 34.91149679895999 36.0 36.0 36.0 32.0 36.0 28 34.87496609994523 36.0 36.0 36.0 32.0 36.0 29 34.844692257489946 36.0 36.0 36.0 32.0 36.0 30 34.831951960779165 36.0 36.0 36.0 32.0 36.0 31 34.81754596847426 36.0 36.0 36.0 32.0 36.0 32 34.77299648489239 36.0 36.0 36.0 32.0 36.0 33 34.740788370925216 36.0 36.0 36.0 32.0 36.0 34 34.716305970083965 36.0 36.0 36.0 32.0 36.0 35 34.66205625921863 36.0 36.0 36.0 32.0 36.0 36 34.632404428090766 36.0 36.0 36.0 32.0 36.0 37 34.60099854251636 36.0 36.0 36.0 32.0 36.0 38 34.54687743314909 36.0 36.0 36.0 32.0 36.0 39 34.4888737833161 36.0 36.0 36.0 32.0 36.0 40 34.44435841849902 36.0 36.0 36.0 32.0 36.0 41 34.41864511760476 36.0 36.0 36.0 32.0 36.0 42 34.34244916741466 36.0 36.0 36.0 32.0 36.0 43 34.35272941369965 36.0 36.0 36.0 32.0 36.0 44 34.306520358404505 36.0 36.0 36.0 32.0 36.0 45 34.215873799063225 36.0 36.0 36.0 32.0 36.0 46 34.22792122239661 36.0 36.0 36.0 32.0 36.0 47 34.164852248251634 36.0 36.0 36.0 32.0 36.0 48 34.12616244381339 36.0 36.0 36.0 32.0 36.0 49 34.12816495285487 36.0 36.0 36.0 32.0 36.0 50 33.59917887506058 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 28.0 22 72.0 23 298.0 24 809.0 25 1975.0 26 4144.0 27 7979.0 28 13380.0 29 20280.0 30 28152.0 31 39201.0 32 56785.0 33 86009.0 34 183690.0 35 700260.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.13077678244876 18.13055278967253 11.890429033663665 25.848241394215037 2 15.566637358214896 20.85475693669812 37.01771192853987 26.56089377654711 3 18.96439653807358 24.37240991966322 28.659400225534377 28.003793316728824 4 12.357849042441229 15.852931990625189 35.702669056736156 36.08654991019743 5 14.061567748493964 36.91956544941412 33.49132945954127 15.527537342550648 6 34.239789897109425 35.00186779510069 16.89256635046835 13.865775957321539 7 29.672503313459863 30.826943349678277 20.846146107176757 18.654407229685102 8 28.196447099292605 33.08339151020151 19.845223285444586 18.8749381050613 9 27.23403548001603 14.374498060479448 19.03503384756436 39.356432611940164 10 16.09837052278696 27.02136184612262 31.535536880635064 25.34473075045535 11 37.2891854013679 21.069649521549938 22.166174131677437 19.474990945404727 12 24.718345222410605 23.93317621204725 28.933324934868153 22.415153630673995 13 30.075516199414558 19.47927766200727 25.35855322439824 25.086652914179936 14 23.419732543877604 20.297340660994205 25.101962616331864 31.180964178796327 15 25.15812735222638 27.831113863941365 23.10898933219954 23.901769451632717 16 25.303963200725065 25.78468784829572 25.184897459989187 23.726451490990023 17 23.457175701140617 26.29366983183823 26.382991008393216 23.866163458627938 18 24.858669578134595 24.082161484988617 28.247362794449316 22.81180614242747 19 25.211317631702805 25.76089219695101 25.736221705483324 23.291568465862863 20 25.134856604955445 24.253630149090256 26.80203942729466 23.80947381865964 21 25.996486642066163 24.753601279366197 24.639609611343527 24.610302467224116 22 25.042298519945476 25.390834824935745 25.371325890193567 24.195540764925212 23 23.21624473127536 24.993307473059296 26.203561299172577 25.586886496492767 24 24.204901554240962 25.945570946909452 25.92378742784756 23.925740071002025 25 24.698048931557757 24.793231536936624 25.748906887266354 24.759812644239265 26 23.257887121128615 25.935072865433845 26.673262961193846 24.1337770522437 27 24.780371387129 25.538770289729552 25.967266981959046 23.7135913411824 28 23.67422353564886 24.9123847616848 26.429707470959684 24.983684231706654 29 23.56915523688046 25.515587026470914 26.52725214467056 24.388005591978065 30 24.000538901515746 25.34997979119316 26.84000748863145 23.80947381865964 31 24.116192765772055 25.299763968134826 25.485842462290016 25.098200803803106 32 23.67483592373494 25.65206208565385 25.74689475498353 24.92620723562769 33 23.29996693104335 25.239312515637767 26.498644872649525 24.962075680669358 34 23.94069983710477 25.569914598107196 26.962572589859203 23.52681297492883 35 24.969161885665393 25.29617712363066 26.366456530069133 23.36820446063482 36 23.575804021815014 26.054488542218913 26.09429376781393 24.275413668152147 37 24.733392472525644 25.688980338843077 25.603333490804552 23.974293697826724 38 23.856277765238403 25.613219184194087 25.785300236381804 24.745202814185706 39 24.381356807043513 24.998906449846288 25.912152054212097 24.707584688898105 40 25.185422364062966 25.138093513410425 26.02588127019787 23.650602852328735 41 23.452626532501185 25.237912771441017 27.125292852731164 24.18416784332663 42 25.239399999650065 25.96499239763933 26.084495558436693 22.71111204427391 43 23.921103418350295 24.697873963533166 26.26978669648122 25.111235921635323 44 23.311164884617337 25.489954210867964 26.689097567419555 24.509783337095143 45 23.560056899601598 25.752056311709037 26.192625797635483 24.495260991053886 46 23.221689055303067 24.978282074947618 26.850791512293704 24.949237357455612 47 24.1958032169621 24.601116645932954 27.023199010380853 24.17988112672409 48 23.998701737257516 26.483772590559074 25.37071350210749 24.14681217007592 49 23.19866044480371 25.49327860333524 26.696183772415594 24.611877179445457 50 22.837263990005827 27.016812677483188 25.21927867682181 24.926644655689174 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 19.5 2 20.0 3 75.5 4 131.0 5 171.5 6 212.0 7 212.0 8 212.0 9 324.5 10 437.0 11 614.5 12 792.0 13 1423.0 14 2054.0 15 2866.0 16 3678.0 17 4503.0 18 5328.0 19 5774.5 20 6221.0 21 6811.0 22 7401.0 23 7582.5 24 7764.0 25 8334.5 26 8905.0 27 10801.0 28 12697.0 29 15058.0 30 17419.0 31 19757.0 32 22095.0 33 26132.0 34 30169.0 35 34916.0 36 39663.0 37 44529.0 38 49395.0 39 50646.0 40 51897.0 41 54720.0 42 57543.0 43 59425.0 44 61307.0 45 69908.0 46 78509.0 47 85817.0 48 93125.0 49 91906.0 50 90687.0 51 83244.5 52 75802.0 53 73009.0 54 70216.0 55 71370.5 56 72525.0 57 70307.5 58 68090.0 59 62124.5 60 56159.0 61 49431.5 62 42704.0 63 37276.0 64 31848.0 65 27357.5 66 22867.0 67 19842.5 68 16818.0 69 15596.5 70 14375.0 71 11094.5 72 7814.0 73 7189.0 74 6564.0 75 4715.5 76 2867.0 77 2598.0 78 2329.0 79 2031.5 80 1734.0 81 1383.0 82 1032.0 83 889.5 84 747.0 85 646.0 86 545.0 87 400.0 88 255.0 89 159.5 90 64.0 91 39.0 92 14.0 93 10.5 94 7.0 95 6.5 96 6.0 97 4.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015047250115041474 2 0.004461684627134391 3 2.624520368902583E-4 4 2.624520368902583E-4 5 0.0 6 6.123880860772694E-4 7 8.748401229675276E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.748401229675276E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1143066.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.95413445687687 #Duplication Level Percentage of deduplicated Percentage of total 1 81.88402466929105 46.636337508850254 2 11.650812420069917 13.27123874209026 3 2.9536112245327506 5.0466111244613705 4 1.1408768235175726 2.599106080214176 5 0.6210971734849866 1.7687025964725052 6 0.34989777231803465 1.195687486245782 7 0.23414959482527517 0.9335051254691374 8 0.17064789352862805 0.7775282458249831 9 0.12373553633571852 0.6342525336202457 >10 0.6771270823215849 7.3892994976213435 >50 0.0868492398518836 3.448196799929311 >100 0.09653061604990736 11.273862471398024 >500 0.008481122652156399 3.2795441755229637 >1k 0.0021588312205489016 1.7461276122796736 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2885 0.2523913754761317 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2585 0.22614617178710592 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1452 0.127026785854885 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1450 0.1268518178302915 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1269 0.11101721160457925 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1258 0.11005488746931498 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1230 0.10760533512500589 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1206 0.10550571882988384 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1160 0.1014814542642332 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 8.748401229675277E-5 0.0 4 0.0 0.0 0.0 8.748401229675277E-5 0.0 5 0.0 0.0 0.0 8.748401229675277E-5 0.0 6 0.0 0.0 0.0 8.748401229675277E-5 0.0 7 0.0 0.0 0.0 8.748401229675277E-5 0.0 8 0.0 0.0 0.0 8.748401229675277E-5 0.0 9 0.0 0.0 0.0 8.748401229675277E-5 0.0 10 0.0 0.0 0.0 8.748401229675277E-5 0.0 11 0.0 0.0 0.0 8.748401229675277E-5 0.0 12 0.0 0.0 0.0 8.748401229675277E-5 8.748401229675277E-5 13 0.0 0.0 0.0 8.748401229675277E-5 8.748401229675277E-5 14 0.0 0.0 0.0 8.748401229675277E-5 8.748401229675277E-5 15 0.0 0.0 0.0 1.7496802459350555E-4 1.7496802459350555E-4 16 0.0 0.0 0.0 2.624520368902583E-4 1.7496802459350555E-4 17 0.0 0.0 0.0 2.624520368902583E-4 1.7496802459350555E-4 18 0.0 0.0 0.0 2.624520368902583E-4 2.624520368902583E-4 19 0.0 0.0 0.0 5.249040737805166E-4 2.624520368902583E-4 20 0.0 0.0 0.0 6.998720983740222E-4 2.624520368902583E-4 21 0.0 0.0 0.0 8.748401229675276E-4 2.624520368902583E-4 22 0.0 0.0 0.0 0.001487228209044797 2.624520368902583E-4 23 0.0 0.0 0.0 0.0027120043811993356 2.624520368902583E-4 24 0.0 0.0 0.0 0.0058614288238824355 2.624520368902583E-4 25 0.0 0.0 0.0 0.007173689008333727 2.624520368902583E-4 26 0.0 0.0 0.0 0.009973177401829816 3.499360491870111E-4 27 0.0 0.0 0.0 0.013035117832216163 3.499360491870111E-4 28 0.0 0.0 0.0 0.0220459710987817 4.374200614837638E-4 29 0.0 0.0 0.0 0.03814302936138421 4.374200614837638E-4 30 0.0 0.0 0.0 0.07689844680884568 4.374200614837638E-4 31 0.0 0.0 0.0 0.15178476133486604 5.249040737805166E-4 32 0.0 0.0 0.0 0.2511665993039772 5.249040737805166E-4 33 0.0 8.748401229675277E-5 0.0 0.3450369444983929 7.87356110670775E-4 34 0.0 8.748401229675277E-5 0.0 0.4612157128284806 7.87356110670775E-4 35 0.0 8.748401229675277E-5 0.0 0.5920917952244228 7.87356110670775E-4 36 0.0 8.748401229675277E-5 0.0 0.7779078373427256 7.87356110670775E-4 37 0.0 8.748401229675277E-5 0.0 1.0444716228109312 7.87356110670775E-4 38 0.0 8.748401229675277E-5 0.0 1.3725366689237541 7.87356110670775E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACTACG 30 0.005745025 29.333185 2 TTAGGAC 590 0.0 21.254133 3 GACGTGA 490 0.0 21.101936 7 GATATAC 360 0.0 20.78222 1 TCTATAC 130 1.6243575E-9 20.30759 3 TAGGACG 845 0.0 20.047237 4 TATGTCG 55 0.0044835936 19.9999 16 TAGTACT 115 2.021261E-7 19.130339 4 CTAGCGG 370 0.0 19.026932 29 CGTCTTA 175 9.094947E-12 18.85705 15 TTTAGGA 690 0.0 18.811502 2 AGGACGT 870 0.0 18.712551 5 TGTAGGA 1000 0.0 18.699907 2 GGACGTG 885 0.0 18.643976 6 TAGCGGC 390 0.0 18.615294 30 CGCAATA 355 0.0 18.591455 36 TAGGGTG 120 3.1617674E-7 18.33324 5 CTGTAGG 950 0.0 18.298649 1 TCTAGCG 385 0.0 18.285624 28 CCGGTCC 445 0.0 17.797665 9 >>END_MODULE