##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062536_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 993208 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19542130147965 32.0 32.0 32.0 32.0 32.0 2 31.38445924720703 32.0 32.0 32.0 32.0 32.0 3 31.48554884777408 32.0 32.0 32.0 32.0 32.0 4 31.60080667896352 32.0 32.0 32.0 32.0 32.0 5 31.533388776570465 32.0 32.0 32.0 32.0 32.0 6 35.1220439223204 36.0 36.0 36.0 36.0 36.0 7 35.13524256751859 36.0 36.0 36.0 36.0 36.0 8 35.07638883295342 36.0 36.0 36.0 36.0 36.0 9 35.20469327673559 36.0 36.0 36.0 36.0 36.0 10 35.08727577707791 36.0 36.0 36.0 36.0 36.0 11 35.21122061038574 36.0 36.0 36.0 36.0 36.0 12 35.121591851857815 36.0 36.0 36.0 36.0 36.0 13 35.16276651013685 36.0 36.0 36.0 36.0 36.0 14 35.11887540172854 36.0 36.0 36.0 36.0 36.0 15 35.07763831946581 36.0 36.0 36.0 36.0 36.0 16 35.089069963189985 36.0 36.0 36.0 36.0 36.0 17 35.05613023656676 36.0 36.0 36.0 36.0 36.0 18 35.0689291669016 36.0 36.0 36.0 36.0 36.0 19 35.039282808837626 36.0 36.0 36.0 36.0 36.0 20 35.02676478642943 36.0 36.0 36.0 36.0 36.0 21 34.99182849916634 36.0 36.0 36.0 36.0 36.0 22 34.96469923721919 36.0 36.0 36.0 36.0 36.0 23 34.8995880017076 36.0 36.0 36.0 32.0 36.0 24 34.87837794298878 36.0 36.0 36.0 32.0 36.0 25 34.840598343952124 36.0 36.0 36.0 32.0 36.0 26 34.76739615468261 36.0 36.0 36.0 32.0 36.0 27 34.7457360391781 36.0 36.0 36.0 32.0 36.0 28 34.7055833219225 36.0 36.0 36.0 32.0 36.0 29 34.66104481639294 36.0 36.0 36.0 32.0 36.0 30 34.6388389944503 36.0 36.0 36.0 32.0 36.0 31 34.624912405055134 36.0 36.0 36.0 32.0 36.0 32 34.575066854072865 36.0 36.0 36.0 32.0 36.0 33 34.53872703401503 36.0 36.0 36.0 32.0 36.0 34 34.511116503290346 36.0 36.0 36.0 32.0 36.0 35 34.44009613293489 36.0 36.0 36.0 32.0 36.0 36 34.39254214625738 36.0 36.0 36.0 32.0 36.0 37 34.327160071203615 36.0 36.0 36.0 32.0 36.0 38 34.27163393770489 36.0 36.0 36.0 32.0 36.0 39 34.13585573213265 36.0 36.0 36.0 32.0 36.0 40 34.05547377789949 36.0 36.0 36.0 32.0 36.0 41 34.06779143945679 36.0 36.0 36.0 32.0 36.0 42 33.923541695193755 36.0 36.0 36.0 32.0 36.0 43 33.96306715209705 36.0 36.0 36.0 32.0 36.0 44 33.932449194931976 36.0 36.0 36.0 32.0 36.0 45 33.75459521067088 36.0 36.0 36.0 32.0 36.0 46 33.86805684207135 36.0 36.0 36.0 32.0 36.0 47 33.77328213224219 36.0 36.0 36.0 32.0 36.0 48 33.784212370419894 36.0 36.0 36.0 32.0 36.0 49 33.81749844946879 36.0 36.0 36.0 32.0 36.0 50 33.2320007490878 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 7.0 21 25.0 22 100.0 23 352.0 24 928.0 25 2323.0 26 4783.0 27 9009.0 28 14853.0 29 21240.0 30 29226.0 31 39809.0 32 57888.0 33 80710.0 34 168688.0 35 563266.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.991163631420214 17.25694951437735 11.689282063934021 26.062604790268413 2 15.326534249320108 20.59077320869577 36.87977824608603 27.202914295898097 3 18.89124155130734 24.825790549949105 28.246951019984877 28.03601687875868 4 12.108364226555215 16.00030607950415 35.5152908862814 36.37603880765924 5 13.726429911962047 37.3055794959364 33.77046902562203 15.19752156647953 6 34.651154595476264 34.72545949728404 17.05055854531542 13.572827361924276 7 29.64504917398974 30.35909900041079 21.35997696353634 18.635874862063133 8 28.619684899839708 32.8122608758689 19.875494357677344 18.69255986661404 9 27.277569250348364 14.129870077566833 18.145745906194875 40.446814765889926 10 15.406541228020718 27.13691391934016 32.19023608347899 25.266308769160133 11 37.56705544055223 20.78346126893863 21.64581839856304 20.003664891946098 12 23.971816578199128 23.672986927209607 29.41327496355245 22.941921531038815 13 30.884265934225258 19.379525738818053 24.845148246892894 24.89106008006379 14 23.943826469380028 19.32576056576266 24.83961063543588 31.89080232942143 15 25.684549459931855 26.852582741983554 23.485312240739102 23.97755555734549 16 26.0978566423146 25.09504554937133 24.919050188882892 23.888047619431177 17 24.039375437974726 25.72784351314126 26.347653260948363 23.88512778793566 18 25.66400995561856 23.491856690642845 27.890935232096396 22.953198121642192 19 25.071888265096536 26.473810118323655 25.130184211162216 23.324117405417596 20 25.029500366489195 23.431144332305013 27.35177324387238 24.187582057333408 21 25.962839606608085 24.969392111219403 23.87475735193434 25.19301093023818 22 24.786046830069836 25.39689571570104 24.828334044832502 24.98872340939662 23 23.333279635282842 24.594344789812407 25.363569363114273 26.70880621179048 24 23.829650989520825 26.146688306981012 25.27849151436557 24.74516918913259 25 25.317254794564683 24.14801330637691 24.774468187932435 25.76026371112597 26 23.56364427189471 24.946134143099936 26.062315245145022 25.42790633986033 27 25.639644465207688 25.245869948691514 25.226941385892985 23.88754420020781 28 24.398212660389365 23.889960612479964 25.788555871479087 25.923270855651587 29 23.714569355059563 25.402534011002732 26.493443468034894 24.38945316590281 30 25.07712382501953 24.41341592093499 26.475119008304404 24.03434124574107 31 24.29944180876513 24.638242946089843 25.153643546971026 25.908671698173997 32 23.960741355285094 25.334270364314428 25.402332643313386 25.302655637087096 33 23.5666647872349 24.696639576000194 25.928204364040564 25.808491272724343 34 23.897008481607077 25.485296131323953 26.73719905598827 23.8804963310807 35 25.74435566366763 24.66311185572408 25.91571956730111 23.67681291330718 36 24.16231041232048 25.569165773936575 25.770835514816635 24.497688298926306 37 25.603297597280733 25.278692882054916 25.43354463516202 23.684464885502333 38 24.473322808515437 25.214456589153535 24.941402002400302 25.37081859993073 39 24.733691230839863 24.658782450403137 25.728850351587983 24.878675967169013 40 25.687771342961398 24.83759695854242 25.087896996399543 24.38673470209664 41 23.602407552093823 25.18767468647051 26.361446947668565 24.848470813767108 42 26.30486262696233 25.586584079065013 25.36789876843521 22.74065452553745 43 24.917640615057472 23.740042367761838 25.29319135568783 26.049125661492862 44 24.284943335132215 24.857431675943005 26.396182874080758 24.46144211484402 45 24.860754242817215 25.091118879429082 25.38078630055336 24.667340577200346 46 23.870955400032422 24.519662064403494 26.666747213823506 24.942635321740582 47 25.157066797689907 23.88925582556725 26.910475952670538 24.0432014240723 48 24.810915739704072 26.810798946444248 24.308100619407014 24.07018469444467 49 23.77075094038711 25.04671730392828 26.874028400898904 24.308503354785703 50 23.649326223711448 27.17970455332619 24.11962046217912 25.051348760783238 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 17.0 1 20.5 2 24.0 3 106.5 4 189.0 5 215.0 6 241.0 7 232.0 8 223.0 9 268.0 10 313.0 11 481.0 12 649.0 13 1122.0 14 1595.0 15 2172.5 16 2750.0 17 3118.5 18 3487.0 19 3745.5 20 4004.0 21 4282.5 22 4561.0 23 4902.0 24 5243.0 25 5709.0 26 6175.0 27 7581.5 28 8988.0 29 10529.5 30 12071.0 31 14158.5 32 16246.0 33 18934.0 34 21622.0 35 25414.5 36 29207.0 37 33329.0 38 37451.0 39 39561.5 40 41672.0 41 45446.5 42 49221.0 43 52122.5 44 55024.0 45 64653.5 46 74283.0 47 81193.5 48 88104.0 49 86331.0 50 84558.0 51 76614.5 52 68671.0 53 65896.0 54 63121.0 55 63944.5 56 64768.0 57 63050.5 58 61333.0 59 55831.0 60 50329.0 61 44616.0 62 38903.0 63 34041.0 64 29179.0 65 24849.0 66 20519.0 67 17764.5 68 15010.0 69 13890.0 70 12770.0 71 9932.0 72 7094.0 73 6283.5 74 5473.0 75 3941.0 76 2409.0 77 2256.0 78 2103.0 79 1789.0 80 1475.0 81 1154.5 82 834.0 83 738.0 84 642.0 85 511.5 86 381.0 87 284.0 88 187.0 89 120.0 90 53.0 91 37.0 92 21.0 93 13.0 94 5.0 95 4.5 96 4.0 97 3.0 98 2.0 99 3.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01540462823497193 2 0.0035239345635556703 3 7.04786912711134E-4 4 2.013676893460383E-4 5 0.0 6 3.0205153401905745E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.0068384467301915E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 993208.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.36605672775883 #Duplication Level Percentage of deduplicated Percentage of total 1 79.91811018096752 45.04668732035695 2 12.518500257645627 14.11236991337834 3 3.4269771669917413 5.79495568198172 4 1.4375291254335478 3.241113929279716 5 0.6925986533013825 1.9519527490777546 6 0.4421435585083261 1.4953133340416076 7 0.2734681653360151 1.0790025484396168 8 0.19696800259452812 0.8881847686237216 9 0.14245993134261284 0.7226914114341307 >10 0.7795510716249833 8.212815706427284 >50 0.07955301464991613 3.1450762452442036 >100 0.08242288928807452 9.48809004805528 >500 0.008098318596425312 3.1823079541652546 >1k 0.0016196637192850622 1.639438389494417 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 4201 0.4229728314713534 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3598 0.3622604731335229 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1440 0.14498473632914757 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1395 0.1404539633188617 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1185 0.11931035593752769 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1163 0.11709531135472126 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1142 0.11498095061658786 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1020 0.10269752156647953 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1018 0.10249615387713348 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0068384467301915E-4 2 0.0 0.0 0.0 0.0 1.0068384467301915E-4 3 0.0 0.0 0.0 1.0068384467301915E-4 1.0068384467301915E-4 4 0.0 0.0 0.0 1.0068384467301915E-4 1.0068384467301915E-4 5 0.0 0.0 0.0 1.0068384467301915E-4 1.0068384467301915E-4 6 0.0 0.0 0.0 1.0068384467301915E-4 1.0068384467301915E-4 7 0.0 0.0 0.0 1.0068384467301915E-4 1.0068384467301915E-4 8 0.0 0.0 0.0 1.0068384467301915E-4 1.0068384467301915E-4 9 0.0 0.0 0.0 1.0068384467301915E-4 1.0068384467301915E-4 10 0.0 0.0 0.0 1.0068384467301915E-4 1.0068384467301915E-4 11 0.0 0.0 0.0 1.0068384467301915E-4 1.0068384467301915E-4 12 0.0 0.0 0.0 1.0068384467301915E-4 3.0205153401905745E-4 13 0.0 0.0 0.0 1.0068384467301915E-4 4.027353786920766E-4 14 0.0 0.0 0.0 1.0068384467301915E-4 4.027353786920766E-4 15 0.0 0.0 0.0 2.013676893460383E-4 4.027353786920766E-4 16 0.0 0.0 0.0 2.013676893460383E-4 4.027353786920766E-4 17 0.0 0.0 0.0 3.0205153401905745E-4 4.027353786920766E-4 18 0.0 0.0 0.0 6.041030680381149E-4 5.034192233650957E-4 19 0.0 0.0 0.0 0.0010068384467301914 5.034192233650957E-4 20 0.0 0.0 0.0 0.0013088899807492489 6.041030680381149E-4 21 0.0 0.0 0.0 0.0016109415147683064 6.041030680381149E-4 22 0.0 0.0 0.0 0.002718463806171517 6.041030680381149E-4 23 0.0 0.0 0.0 0.004430089165612843 6.041030680381149E-4 24 0.0 0.0 0.0 0.006645133748419263 6.041030680381149E-4 25 0.0 0.0 0.0 0.0077526560398224744 6.041030680381149E-4 26 0.0 0.0 0.0 0.010068384467301914 6.041030680381149E-4 27 0.0 0.0 0.0 0.012988215962819469 6.041030680381149E-4 28 0.0 0.0 0.0 0.018525827419835522 7.04786912711134E-4 29 0.0 0.0 0.0 0.025976431925638938 7.04786912711134E-4 30 0.0 0.0 0.0 0.039669434801169544 7.04786912711134E-4 31 0.0 0.0 0.0 0.06937116897971018 7.04786912711134E-4 32 1.0068384467301915E-4 0.0 0.0 0.105214617683305 7.04786912711134E-4 33 1.0068384467301915E-4 0.0 0.0 0.14015191178484265 7.04786912711134E-4 34 1.0068384467301915E-4 0.0 0.0 0.1866678480237775 7.04786912711134E-4 35 1.0068384467301915E-4 0.0 0.0 0.23247899735000122 7.04786912711134E-4 36 1.0068384467301915E-4 0.0 0.0 0.3082939323887846 7.04786912711134E-4 37 1.0068384467301915E-4 0.0 0.0 0.4254899275881789 7.04786912711134E-4 38 1.0068384467301915E-4 0.0 0.0 0.5515461011187989 7.04786912711134E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 35 3.217474E-4 31.428537 10 CCGTACG 30 0.005744558 29.3333 9 TCGTATA 100 6.002665E-11 26.39997 44 GTCGTAT 115 1.2732926E-11 24.869537 43 ATAACCG 45 0.0013980478 24.444416 5 ATTTCGT 200 0.0 23.099974 42 TATACTA 105 3.0686351E-9 23.047594 5 TGGTATA 380 0.0 20.842081 44 AGTCGTA 140 1.8553692E-10 20.428549 42 TCCGTAC 65 4.931349E-4 20.307669 8 GATTTCG 220 0.0 19.999977 41 GTGTAGG 155 3.45608E-11 19.871944 1 TGTAGGA 570 0.0 19.298223 2 GTCCTAC 515 0.0 19.224247 1 GTAGGAC 590 0.0 19.016928 3 CTAAACC 70 8.121992E-4 18.857122 3 GAATACG 60 0.0074090906 18.334236 1 CGACAAT 60 0.0074112425 18.333313 20 TACGTGT 60 0.0074112425 18.333313 12 CGAACGA 205 0.0 18.243881 16 >>END_MODULE