##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062534_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2017269 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27181650042706 32.0 32.0 32.0 32.0 32.0 2 31.412800176872793 32.0 32.0 32.0 32.0 32.0 3 31.504691739178067 32.0 32.0 32.0 32.0 32.0 4 31.611176298252737 32.0 32.0 32.0 32.0 32.0 5 31.53559738438453 32.0 32.0 32.0 32.0 32.0 6 35.14159638600504 36.0 36.0 36.0 36.0 36.0 7 35.16032219798153 36.0 36.0 36.0 36.0 36.0 8 35.09361864976857 36.0 36.0 36.0 36.0 36.0 9 35.22341938531748 36.0 36.0 36.0 36.0 36.0 10 35.10395440568412 36.0 36.0 36.0 36.0 36.0 11 35.23634378954914 36.0 36.0 36.0 36.0 36.0 12 35.147820642660946 36.0 36.0 36.0 36.0 36.0 13 35.1933311819098 36.0 36.0 36.0 36.0 36.0 14 35.14946841497093 36.0 36.0 36.0 36.0 36.0 15 35.10989560638665 36.0 36.0 36.0 36.0 36.0 16 35.1266489496443 36.0 36.0 36.0 36.0 36.0 17 35.09479449691638 36.0 36.0 36.0 36.0 36.0 18 35.114820085967715 36.0 36.0 36.0 36.0 36.0 19 35.10000351960993 36.0 36.0 36.0 36.0 36.0 20 35.09757945023693 36.0 36.0 36.0 36.0 36.0 21 35.094762770855056 36.0 36.0 36.0 36.0 36.0 22 35.07769910706009 36.0 36.0 36.0 36.0 36.0 23 35.04155767029583 36.0 36.0 36.0 36.0 36.0 24 35.01820282768436 36.0 36.0 36.0 36.0 36.0 25 34.985294970576554 36.0 36.0 36.0 36.0 36.0 26 34.95115177995597 36.0 36.0 36.0 32.0 36.0 27 34.93120104458057 36.0 36.0 36.0 32.0 36.0 28 34.917528103589554 36.0 36.0 36.0 32.0 36.0 29 34.8971014772943 36.0 36.0 36.0 32.0 36.0 30 34.88726937260227 36.0 36.0 36.0 32.0 36.0 31 34.887925705495896 36.0 36.0 36.0 32.0 36.0 32 34.85719901510409 36.0 36.0 36.0 32.0 36.0 33 34.84000497702587 36.0 36.0 36.0 32.0 36.0 34 34.82886119798599 36.0 36.0 36.0 32.0 36.0 35 34.807636462960566 36.0 36.0 36.0 32.0 36.0 36 34.783190541271395 36.0 36.0 36.0 32.0 36.0 37 34.78128251611461 36.0 36.0 36.0 32.0 36.0 38 34.742197991442886 36.0 36.0 36.0 32.0 36.0 39 34.743960770725174 36.0 36.0 36.0 32.0 36.0 40 34.73991222786847 36.0 36.0 36.0 32.0 36.0 41 34.70950279808989 36.0 36.0 36.0 32.0 36.0 42 34.68834548094478 36.0 36.0 36.0 32.0 36.0 43 34.681435148212756 36.0 36.0 36.0 32.0 36.0 44 34.64224106948553 36.0 36.0 36.0 32.0 36.0 45 34.61126899783817 36.0 36.0 36.0 32.0 36.0 46 34.61575476547748 36.0 36.0 36.0 32.0 36.0 47 34.59650894352711 36.0 36.0 36.0 32.0 36.0 48 34.555931311094355 36.0 36.0 36.0 32.0 36.0 49 34.54028490994508 36.0 36.0 36.0 32.0 36.0 50 34.0470586718975 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 14.0 21 53.0 22 169.0 23 486.0 24 1302.0 25 2981.0 26 6004.0 27 10840.0 28 18321.0 29 28721.0 30 41401.0 31 60319.0 32 89742.0 33 151793.0 34 346996.0 35 1258126.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.16563128110495 17.75392892875523 11.485392387164458 26.595047402975364 2 16.971828053365485 19.83220172279772 36.03493781429954 27.161032409537256 3 19.024043964520242 23.153203127207508 28.091230543563235 29.73152236470901 4 12.633677148339808 15.132305242687261 35.433683295270285 36.80033431370265 5 14.857817602817274 36.15473997505537 33.06506621827145 15.92237620385591 6 35.42715224401476 34.91769756426431 16.071939343315545 13.583210848405383 7 31.177067201779835 29.77165156042727 20.08964599646651 18.961635241326388 8 28.61522186679119 32.47112804489634 18.935848416844753 19.977801671467713 9 27.322632727712566 14.015632025277739 18.3357797100932 40.325955536916496 10 16.025577154063242 26.198390001531774 30.88388311127569 26.892149733129294 11 38.46517246832227 20.90707783642142 21.539764899971196 19.08798479528511 12 24.896977051647546 23.469205148148315 28.03577509989991 23.598042700304223 13 29.502659288374527 18.950720008090148 25.29424682578278 26.252373877752543 14 23.567605510221988 19.501960323585994 24.46713849268491 32.463295673507105 15 25.492237277229762 27.176990277449363 21.60599305298401 25.724779392336867 16 26.369710732678687 25.55603640367249 23.29451352298578 24.779739340663046 17 24.455984799250867 25.7113453882452 24.736413438168135 25.096256374335795 18 25.485545061169333 24.353023815861942 25.841917959379735 24.31951316358899 19 25.847271732228077 24.626115803098152 25.037364873004048 24.489247591669727 20 26.001837137238514 23.965024000269672 24.571437919285927 25.46170094320589 21 27.112546715386 23.83802061103403 24.08503774161998 24.96439493195999 22 26.217376066355058 24.02371721371815 24.719211964294303 25.039694755632492 23 24.56201924483051 23.79246396985231 25.51246264132349 26.13305414399369 24 25.022939429496017 24.63023027667604 25.003655932847824 25.343174360980118 25 25.08227707856513 24.19488922895261 25.169275887350672 25.553557805131593 26 24.686841467350167 25.23401688123894 25.472606776785845 24.606534874625048 27 25.748573938329493 24.307913322417583 24.675390342091212 25.268122397161708 28 24.649513773324234 24.49747653882551 25.593066665873515 25.259943021976746 29 24.615953549080466 24.652141087777586 25.33137623192544 25.40052913121651 30 24.52687271752057 24.85196570214483 25.612796310259068 25.008365270075533 31 25.326419034843646 24.63900451551082 24.538422986721155 25.496153462924383 32 25.17140748209584 24.43253725705397 24.597909351702725 25.79814590914747 33 24.652041943835947 24.16603834193655 25.21939314984764 25.96252656437986 34 25.411583680708922 24.51948649386869 25.243881703431718 24.825048121990672 35 25.904229926697926 24.118895397688657 25.308771413232446 24.66810326238097 36 24.51190198233354 24.82752672053157 25.136409670698356 25.52416162643653 37 25.92445529079166 24.509671243646732 24.659279451575372 24.906594013986236 38 24.79332206066717 24.208422376985915 25.398744540267064 25.599511022079852 39 25.57338659345878 24.24664236648657 24.58204632104097 25.597924719013676 40 25.669556216845645 24.43833717763967 25.29494083337423 24.597165772140453 41 24.56598500249595 24.884435343030603 25.738411684311806 24.81116797016164 42 25.985825390664306 24.91556654070429 25.021006122634116 24.077601945997287 43 24.987247610507076 23.798908326058648 25.446978067872948 25.76686599556133 44 24.500599572987046 24.577783131550625 25.06686019564074 25.85475709982159 45 24.57575068074709 24.925728794721973 25.154999159755093 25.343521364775846 46 24.494203785818918 24.26384238064905 25.32037188966249 25.921581943869548 47 24.879874721715346 24.190526895520627 25.625189302963562 25.30440907980046 48 25.68422952020777 24.861235660687793 24.625074791710972 24.82946002739347 49 24.563308116071777 24.990965508318425 24.979910958826014 25.465815416783784 50 24.400525859727114 25.277008310249304 24.951072440548305 25.371393389475273 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 12.0 1 24.5 2 37.0 3 120.5 4 204.0 5 241.5 6 279.0 7 248.0 8 217.0 9 292.5 10 368.0 11 619.0 12 870.0 13 1468.5 14 2067.0 15 2818.5 16 3570.0 17 4009.0 18 4448.0 19 4854.5 20 5261.0 21 6306.0 22 7351.0 23 8085.5 24 8820.0 25 10922.5 26 13025.0 27 16504.0 28 19983.0 29 22896.0 30 25809.0 31 28482.5 32 31156.0 33 35744.0 34 40332.0 35 47097.5 36 53863.0 37 64057.5 38 74252.0 39 80309.0 40 86366.0 41 93899.5 42 101433.0 43 103451.0 44 105469.0 45 115905.5 46 126342.0 47 134359.0 48 142376.0 49 147393.0 50 152410.0 51 146199.5 52 139989.0 53 137618.5 54 135248.0 55 137768.5 56 140289.0 57 138443.5 58 136598.0 59 125749.5 60 114901.0 61 102054.0 62 89207.0 63 79240.0 64 69273.0 65 60179.0 66 51085.0 67 46620.0 68 42155.0 69 39209.0 70 36263.0 71 27692.5 72 19122.0 73 17062.5 74 15003.0 75 10913.0 76 6823.0 77 6103.5 78 5384.0 79 4697.0 80 4010.0 81 3150.0 82 2290.0 83 1938.5 84 1587.0 85 1314.0 86 1041.0 87 764.0 88 487.0 89 307.5 90 128.0 91 78.5 92 29.0 93 23.0 94 17.0 95 11.5 96 6.0 97 8.0 98 10.0 99 7.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015218595041117472 2 0.004213617519527639 3 2.974318249078333E-4 4 9.914394163594444E-5 5 4.957197081797222E-5 6 6.940075914516111E-4 7 4.957197081797222E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.9828788327188888E-4 47 0.0 48 0.0 49 0.0 50 4.957197081797222E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2017269.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.127744944733664 #Duplication Level Percentage of deduplicated Percentage of total 1 78.70368443268364 40.239419038850556 2 12.714007387686848 13.000770538862255 3 3.7656908289656745 5.77593840732239 4 1.5565929543445742 3.183403502099954 5 0.8000012181126791 2.0451129117570654 6 0.498122528288086 1.5280728946523487 7 0.3345698410251014 1.1974061048692035 8 0.22097332683093757 0.903829431504116 9 0.19529211589865697 0.8986360942245512 >10 1.0092385205145389 9.403788970562301 >50 0.09499467732753164 3.38610830508803 >100 0.0880384542724344 9.51432205523275 >500 0.01334061567234892 4.6309945742167695 >1k 0.005453098377018536 4.292197170757777 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 3044 0.1508970791699074 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2864 0.14197412442267243 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2855 0.14152797668531067 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2457 0.12179833229975774 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2322 0.11510611623933148 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2300 0.1140155328813361 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2289 0.11347024120233842 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2280 0.11302409346497666 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 2143 0.10623273346291445 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2053 0.10177125608929696 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 4.957197081797222E-5 6 0.0 0.0 0.0 0.0 1.4871591245391665E-4 7 0.0 0.0 0.0 0.0 1.9828788327188888E-4 8 0.0 0.0 0.0 0.0 1.9828788327188888E-4 9 0.0 0.0 0.0 0.0 1.9828788327188888E-4 10 0.0 0.0 0.0 0.0 1.9828788327188888E-4 11 0.0 0.0 0.0 0.0 1.9828788327188888E-4 12 0.0 0.0 0.0 0.0 2.974318249078333E-4 13 0.0 0.0 0.0 0.0 2.974318249078333E-4 14 0.0 0.0 0.0 9.914394163594444E-5 3.4700379572580553E-4 15 0.0 0.0 0.0 9.914394163594444E-5 5.452916789976944E-4 16 0.0 0.0 0.0 1.4871591245391665E-4 5.452916789976944E-4 17 0.0 0.0 0.0 1.9828788327188888E-4 5.452916789976944E-4 18 0.0 0.0 0.0 2.974318249078333E-4 5.452916789976944E-4 19 0.0 0.0 0.0 3.4700379572580553E-4 6.444356206336388E-4 20 0.0 0.0 0.0 5.948636498156666E-4 6.444356206336388E-4 21 0.0 0.0 0.0 8.427235039055277E-4 6.940075914516111E-4 22 0.0 0.0 0.0 9.418674455414722E-4 6.940075914516111E-4 23 0.0 0.0 0.0 0.0014375871537211943 6.940075914516111E-4 24 0.0 0.0 0.0 0.0018341629202649722 6.940075914516111E-4 25 0.0 0.0 0.0 0.002280310657626722 6.940075914516111E-4 26 0.0 0.0 0.0 0.003023890219896305 6.940075914516111E-4 27 0.0 0.0 0.0 0.004362333431981555 6.940075914516111E-4 28 0.0 0.0 0.0 0.008278519126601361 6.940075914516111E-4 29 0.0 0.0 0.0 0.018044197377741888 6.940075914516111E-4 30 0.0 0.0 0.0 0.03940971680028792 6.940075914516111E-4 31 0.0 0.0 0.0 0.08486721404036844 6.940075914516111E-4 32 4.957197081797222E-5 0.0 0.0 0.13319988558789136 7.435795622695833E-4 33 4.957197081797222E-5 0.0 0.0 0.18480430720940044 7.435795622695833E-4 34 4.957197081797222E-5 0.0 0.0 0.2416137857667966 7.435795622695833E-4 35 4.957197081797222E-5 0.0 0.0 0.30536334023870887 7.435795622695833E-4 36 4.957197081797222E-5 0.0 0.0 0.3982116415807708 7.435795622695833E-4 37 4.957197081797222E-5 0.0 0.0 0.5319072468768419 7.435795622695833E-4 38 4.957197081797222E-5 0.0 0.0 0.7167115540862423 7.435795622695833E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3010 0.0 23.468008 1 ATTTCGT 270 0.0 20.37021 42 ATACGAA 835 0.0 20.287264 40 CGGTCCA 880 0.0 20.24984 10 GGTATCA 1460 0.0 19.443502 1 CGCAATA 870 0.0 19.218239 36 CGAATGC 895 0.0 18.927225 43 TAGCGGC 880 0.0 18.749853 30 CTAGCGG 880 0.0 18.749853 29 TAGGACG 345 0.0 18.492609 4 GCCGGTC 940 0.0 18.489216 8 CGCCGGT 945 0.0 18.39139 7 GTATACG 60 0.0074024634 18.338188 1 TACGAAT 925 0.0 18.313368 41 CAATACG 930 0.0 18.21491 38 GATATAC 290 0.0 18.211718 1 TAGTACG 145 6.3082553E-9 18.208107 2 TCTAGCG 910 0.0 18.131727 28 AACGCAG 3850 0.0 18.057001 6 GATTTCG 305 0.0 18.032644 41 >>END_MODULE