##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062530_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1669561 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.163902966109056 32.0 32.0 32.0 32.0 32.0 2 30.794633439568845 32.0 32.0 32.0 32.0 32.0 3 30.780957988357418 32.0 32.0 32.0 32.0 32.0 4 30.86213980800941 32.0 32.0 32.0 32.0 32.0 5 30.63228597218071 32.0 32.0 32.0 32.0 32.0 6 34.29862640538441 36.0 36.0 36.0 32.0 36.0 7 34.17228900291753 36.0 36.0 36.0 32.0 36.0 8 34.15994204464527 36.0 36.0 36.0 32.0 36.0 9 34.3432752681693 36.0 36.0 36.0 32.0 36.0 10 33.987493119448764 36.0 36.0 36.0 32.0 36.0 11 34.3224278717579 36.0 36.0 36.0 32.0 36.0 12 34.08744873652415 36.0 36.0 36.0 32.0 36.0 13 34.23165790288585 36.0 36.0 36.0 32.0 36.0 14 34.125059821114654 36.0 36.0 36.0 32.0 36.0 15 34.05376143788696 36.0 36.0 36.0 32.0 36.0 16 34.058466866439744 36.0 36.0 36.0 32.0 36.0 17 33.97124214089811 36.0 36.0 36.0 32.0 36.0 18 33.98668931533499 36.0 36.0 36.0 32.0 36.0 19 33.974390872810275 36.0 36.0 36.0 32.0 36.0 20 33.97006338792054 36.0 36.0 36.0 32.0 36.0 21 33.9546347812389 36.0 36.0 36.0 32.0 36.0 22 33.902103606876295 36.0 36.0 36.0 32.0 36.0 23 33.87030243279521 36.0 36.0 36.0 32.0 36.0 24 33.83830599780421 36.0 36.0 36.0 32.0 36.0 25 33.37977827704408 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 17.0 4 63.0 5 170.0 6 271.0 7 82.0 8 246.0 9 303.0 10 185.0 11 71.0 12 119.0 13 107.0 14 312.0 15 385.0 16 536.0 17 757.0 18 1033.0 19 1452.0 20 2242.0 21 3339.0 22 5155.0 23 7704.0 24 10599.0 25 15178.0 26 20780.0 27 26749.0 28 35979.0 29 47147.0 30 60965.0 31 83076.0 32 118257.0 33 170063.0 34 376431.0 35 679788.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.87569118854779 17.186042708578555 10.901535695010264 26.03673040786339 2 17.368045584987573 19.738160655574703 36.05061883908746 26.84317492035026 3 19.39819043825417 23.474226773247718 27.73726912513889 29.39031366335922 4 12.89134129399847 14.638849667313847 34.94411699338222 37.52569204530546 5 15.150886926927768 36.096323170348086 32.835080424095175 15.917709478628971 6 35.3263777821855 34.35537309434937 16.43445209005104 13.88379703341409 7 30.97880583614186 29.902105630979047 20.420622728779314 18.69846580409978 8 28.94635560543278 31.812497602056478 19.294692871393494 19.94645392111725 9 27.565696347408387 14.03228775153048 18.402291690523455 39.99972421053767 10 16.465275820505287 26.019537410723387 30.70689686190085 26.808289906870474 11 38.20368510217238 20.96886103656617 21.438419214104737 19.389034647156713 12 25.087593876285418 23.34879095860867 27.976542473883768 23.58707269122214 13 29.567464389138724 18.954938984935286 25.17098550618606 26.306611119739927 14 23.83933792110826 19.40005097527699 24.420516049715886 32.34009505389886 15 25.6222888235668 26.633661822678118 21.961833351922543 25.782216001832538 16 26.472110241045854 25.323276314377186 23.15099140068514 25.053622043891828 17 24.486646912745115 25.462289140080728 24.681727382689353 25.3693365644848 18 25.567982132597333 24.174070435661875 25.66735876463511 24.590588667105674 19 25.80964575842722 24.77022127728482 24.95824249639401 24.46189046789395 20 25.979449697094726 23.755185851067274 24.60675087165476 25.658613580183243 21 27.197650945127545 23.80978940790239 24.027854244407738 24.96470540256232 22 26.298172726585623 23.790965488034725 24.539282599332722 25.371579186046926 23 24.77090468507267 23.60650427960485 25.306829973428663 26.315761061893824 24 25.01872744534855 24.6473572560829 24.854573664983544 25.479341633585012 25 25.08847676034418 24.24494133635443 24.813435633119365 25.853146270182027 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 197.0 1 197.0 2 540.0 3 883.0 4 883.0 5 883.0 6 2290.5 7 3698.0 8 3698.0 9 3698.0 10 3889.5 11 4081.0 12 4081.0 13 4081.0 14 4289.5 15 4498.0 16 4498.0 17 4498.0 18 7036.5 19 9575.0 20 9575.0 21 9575.0 22 15637.5 23 21700.0 24 21700.0 25 21700.0 26 31930.5 27 42161.0 28 42161.0 29 42161.0 30 52028.0 31 61895.0 32 61895.0 33 61895.0 34 78010.0 35 94125.0 36 94125.0 37 94125.0 38 109248.5 39 124372.0 40 124372.0 41 124372.0 42 144645.0 43 164918.0 44 164918.0 45 164918.0 46 189737.5 47 214557.0 48 214557.0 49 214557.0 50 220242.5 51 225928.0 52 225928.0 53 225928.0 54 210862.5 55 195797.0 56 195797.0 57 195797.0 58 182827.5 59 169858.0 60 169858.0 61 169858.0 62 152192.5 63 134527.0 64 134527.0 65 134527.0 66 112852.0 67 91177.0 68 91177.0 69 91177.0 70 69585.5 71 47994.0 72 47994.0 73 47994.0 74 37767.5 75 27541.0 76 27541.0 77 27541.0 78 22595.5 79 17650.0 80 17650.0 81 17650.0 82 12318.0 83 6986.0 84 6986.0 85 6986.0 86 5123.0 87 3260.0 88 3260.0 89 3260.0 90 2211.5 91 1163.0 92 1163.0 93 1163.0 94 711.5 95 260.0 96 260.0 97 260.0 98 510.0 99 760.0 100 760.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009223981633495271 2 0.0038333430165175156 3 0.005750014524776273 4 0.01617191585093327 5 0.035698006841319366 6 0.046359492106008704 7 0.06768246263538738 8 0.08774761748747126 9 0.09715128707486578 10 0.11925290540447459 11 0.12194822471296347 12 0.1321904380852212 13 0.12110968092810027 14 0.12494302394461777 15 0.11541956238795709 16 0.11200549126387116 17 0.12242739259002815 18 0.12979459869989776 19 0.13153158225425726 20 0.12236749660539507 21 0.12979459869989776 22 0.14896131378248534 23 0.1408154598723856 24 0.13308887785471749 25 0.13021387059232936 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1669561.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.649227545735 #Duplication Level Percentage of deduplicated Percentage of total 1 76.88359585893937 38.1721114533481 2 13.671174079089967 13.575264653401838 3 4.144135967844055 6.1725944894386275 4 1.7429613904119408 3.461467467039725 5 0.939461241079215 2.3321762464370277 6 0.5737354603326985 1.7091313452669097 7 0.3702669585219833 1.286842793342762 8 0.2644223181754286 1.0502691074610078 9 0.2007296075076578 0.8969462962482402 >10 1.006793234670138 8.956468224004348 >50 0.09100838254079104 3.199623141209752 >100 0.09128288957095315 9.899242437885292 >500 0.014266557013407094 4.680938075814685 >1k 0.006166054302404761 4.606924269101687 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3692 0.2211359752653542 No Hit TATCAACGCAGAGTACTTTTTTTTT 2431 0.14560713864303249 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2232 0.13368783770104836 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2202 0.1318909581620558 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2128 0.12745865529920739 No Hit GGGTAGGCACACGCTGAGCCAGTCA 2057 0.12320604039025827 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1976 0.1183544656349783 No Hit GAATAACGCCGCCGCATCGCCAGTC 1917 0.11482060254162621 No Hit GAATAGGACCGCGGTTCTATTTTGT 1901 0.11386226678749684 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1879 0.11254455512556893 No Hit GTATCTGATCGTCTTCGAACCTCCG 1844 0.11044819566341092 No Hit GAACTACGACGGTATCTGATCGTCT 1842 0.11032840369414475 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 1747 0.10463828515400156 No Hit GTCCTATTCCATTATTCCTAGCTGC 1713 0.10260182167647663 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1979196926617236E-4 2 0.0 0.0 0.0 0.0 1.1979196926617236E-4 3 0.0 0.0 0.0 0.0 1.1979196926617236E-4 4 0.0 0.0 0.0 0.0 1.1979196926617236E-4 5 0.0 0.0 0.0 0.0 1.1979196926617236E-4 6 0.0 0.0 0.0 0.0 1.7968795389925854E-4 7 0.0 0.0 0.0 1.1979196926617236E-4 1.7968795389925854E-4 8 0.0 0.0 0.0 1.7968795389925854E-4 1.7968795389925854E-4 9 0.0 0.0 0.0 1.7968795389925854E-4 1.7968795389925854E-4 10 0.0 0.0 0.0 1.7968795389925854E-4 1.7968795389925854E-4 11 0.0 0.0 0.0 1.7968795389925854E-4 1.7968795389925854E-4 12 0.0 0.0 0.0 1.7968795389925854E-4 3.5937590779851707E-4 13 0.0 0.0 0.0 1.7968795389925854E-4 4.7916787706468945E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAT 170 0.0 13.403686 1 TCGCGTA 175 0.0 13.02892 9 CGTTATT 185 0.0 12.832795 2 TCGGCGT 235 0.0 12.531876 13 GGTCGGC 255 0.0 12.29408 11 GGACCGT 70 1.09071945E-4 12.214614 6 GTATTAC 95 1.0475087E-6 11.992772 1 CGCATCG 325 0.0 11.984577 13 GGCGTCC 265 0.0 11.830861 15 CGGCGTC 250 0.0 11.780316 14 AACGCCA 260 0.0 11.692971 15 CGCGTAA 195 0.0 11.692621 10 GCGTAAC 195 0.0 11.692271 11 AAGACGG 410 0.0 11.584288 5 CGAACGA 165 7.2759576E-12 11.517532 16 AACCGCG 190 0.0 11.500308 7 GTCGGCG 265 0.0 11.47235 12 CCGCATC 340 0.0 11.456533 12 ATCGCCA 365 0.0 11.454423 16 CGGTCGG 275 0.0 11.400306 10 >>END_MODULE