##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062530_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1669561 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.272387172436346 32.0 32.0 32.0 32.0 32.0 2 31.404657871140977 32.0 32.0 32.0 32.0 32.0 3 31.49384538809903 32.0 32.0 32.0 32.0 32.0 4 31.600340448776656 32.0 32.0 32.0 32.0 32.0 5 31.53037834496613 32.0 32.0 32.0 32.0 32.0 6 35.129401681040704 36.0 36.0 36.0 36.0 36.0 7 35.13663052742607 36.0 36.0 36.0 36.0 36.0 8 35.07467951156023 36.0 36.0 36.0 36.0 36.0 9 35.207281435059876 36.0 36.0 36.0 36.0 36.0 10 35.07689087131288 36.0 36.0 36.0 36.0 36.0 11 35.21250735971911 36.0 36.0 36.0 36.0 36.0 12 35.1219991362999 36.0 36.0 36.0 36.0 36.0 13 35.16806274224182 36.0 36.0 36.0 36.0 36.0 14 35.124753752633175 36.0 36.0 36.0 36.0 36.0 15 35.08810699339527 36.0 36.0 36.0 36.0 36.0 16 35.1001005653582 36.0 36.0 36.0 36.0 36.0 17 35.06888517400682 36.0 36.0 36.0 36.0 36.0 18 35.08821420720776 36.0 36.0 36.0 36.0 36.0 19 35.0690349139684 36.0 36.0 36.0 36.0 36.0 20 35.06221036547931 36.0 36.0 36.0 36.0 36.0 21 35.05721024868214 36.0 36.0 36.0 36.0 36.0 22 35.043466516048234 36.0 36.0 36.0 36.0 36.0 23 35.0058769940122 36.0 36.0 36.0 36.0 36.0 24 34.97800918924196 36.0 36.0 36.0 36.0 36.0 25 34.955538012687164 36.0 36.0 36.0 32.0 36.0 26 34.90837771126662 36.0 36.0 36.0 32.0 36.0 27 34.89722807372716 36.0 36.0 36.0 32.0 36.0 28 34.883575382989896 36.0 36.0 36.0 32.0 36.0 29 34.85724630606489 36.0 36.0 36.0 32.0 36.0 30 34.847995371238305 36.0 36.0 36.0 32.0 36.0 31 34.84987191243686 36.0 36.0 36.0 32.0 36.0 32 34.810670589454354 36.0 36.0 36.0 32.0 36.0 33 34.79450346528219 36.0 36.0 36.0 32.0 36.0 34 34.77603933009935 36.0 36.0 36.0 32.0 36.0 35 34.74696162643953 36.0 36.0 36.0 32.0 36.0 36 34.72578300523311 36.0 36.0 36.0 32.0 36.0 37 34.71403320992764 36.0 36.0 36.0 32.0 36.0 38 34.68195771223693 36.0 36.0 36.0 32.0 36.0 39 34.67377711865574 36.0 36.0 36.0 32.0 36.0 40 34.66697592960065 36.0 36.0 36.0 32.0 36.0 41 34.62861195248332 36.0 36.0 36.0 32.0 36.0 42 34.60295970018466 36.0 36.0 36.0 32.0 36.0 43 34.5883426840948 36.0 36.0 36.0 32.0 36.0 44 34.55788377902934 36.0 36.0 36.0 32.0 36.0 45 34.5144831485642 36.0 36.0 36.0 32.0 36.0 46 34.51451070071713 36.0 36.0 36.0 32.0 36.0 47 34.48855297889685 36.0 36.0 36.0 32.0 36.0 48 34.445214041295884 36.0 36.0 36.0 32.0 36.0 49 34.43718797935505 36.0 36.0 36.0 32.0 36.0 50 33.919152998902106 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 11.0 21 35.0 22 164.0 23 417.0 24 1146.0 25 2569.0 26 5354.0 27 9878.0 28 16264.0 29 25411.0 30 36488.0 31 52866.0 32 78376.0 33 129204.0 34 290102.0 35 1021270.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.381497799995806 17.809041433162704 11.387245666635716 26.42221510020577 2 16.80837567632484 20.167523110198797 35.799559269506275 27.22454194397008 3 18.802064740565754 23.786144340171877 28.080280026545978 29.331510892716388 4 12.617942822026654 15.102191656599137 35.161021563179254 37.118843958194944 5 14.915178301361856 36.38064137818265 32.70338729761896 16.000793022836543 6 35.52956989086301 34.606628241211865 16.084185407710926 13.7796164602142 7 30.958557369272523 29.93325790432335 20.40302810139911 18.705156625005014 8 29.019245178822455 31.998890726364593 19.070582027251476 19.911282067561473 9 27.59875200726418 13.822915125592896 18.34152810229755 40.23680476484537 10 16.35693454746487 26.09410497729643 30.6886061665312 26.860354308707496 11 38.43926637002182 20.906094476332402 21.386340481120484 19.26829867252529 12 25.106420190696838 23.393814302083 27.84336720850571 23.65639829871445 13 29.655160847671937 18.79428185013905 25.247415338523123 26.3031419636659 14 23.934195875442708 19.18959534871742 24.355624023321102 32.52058475251878 15 25.647640307841403 26.605676582047614 21.86089636736843 25.885786742742557 16 26.49564765827664 25.283951889149304 23.041805600394355 25.178594852179703 17 24.64983309983882 25.32150667151425 24.626234081893383 25.402426146753548 18 25.747187434301594 23.989479869259046 25.67680965235772 24.58652304408165 19 25.91405764748937 24.58310897295756 24.93529736260011 24.56753601695296 20 26.00659694374749 23.688083274585356 24.586702732035548 25.71861704963161 21 27.30975388140954 23.706830717775514 24.020206509375818 24.963208891439127 22 26.298649764818414 23.710364580868863 24.58790065172821 25.403085002584515 23 24.8154454973493 23.44634308060622 25.346782777029407 26.39142864501507 24 25.12702440941062 24.554838068210746 24.793583462958228 25.524554059420414 25 25.22573299208594 23.939047450197986 24.930385891860197 25.904833665855875 26 24.9857896776458 24.856054974930537 25.294194102521562 24.863961244902104 27 25.94029208875866 24.130235433146797 24.50015303424074 25.429319443853803 28 24.933320795107218 23.995050195829922 25.439801241164595 25.63182776789827 29 24.85533622311494 24.425762221326444 25.320728023714018 25.3981735318446 30 24.788492304264416 24.52285361241668 25.666028375123762 25.02262570819515 31 25.332168156778938 24.49027019677628 24.447085191855823 25.730476454588963 32 25.177037556579247 24.328670830236213 24.376827201881213 26.11746441130333 33 24.800711085129564 23.90724268235782 25.015318398069912 26.27672783444271 34 25.521679052158024 24.167071463696146 25.177576620440945 25.13367286370489 35 26.217131329732783 23.878612401703204 25.197581879308395 24.706674389255618 36 24.910919696854442 24.6787628604166 24.668520647044343 25.741796795684614 37 26.097219568497348 24.35071255258119 24.55184326897909 25.00022460994237 38 25.01430016633115 23.944917256692026 25.14882654781706 25.89195602915976 39 25.712507659199034 24.109391630494486 24.47805141591113 25.700049294395356 40 25.779651057972725 24.180847540161754 25.130498376519338 24.909003025346184 41 24.5661584093064 24.819578320288986 25.557436954983974 25.05682631542064 42 26.193113039894918 24.71715618656641 24.79885430960594 24.290876463932733 43 25.19452718409211 23.641544094525447 25.082521692828237 26.081407028554217 44 24.790109495849507 24.451757078657206 24.846112241481443 25.912021184011845 45 24.940987481140255 24.613476237166537 24.93823226584713 25.50730401584608 46 24.743015816162124 24.388670534356997 25.09137148874133 25.776942160739548 47 25.00035937612305 24.039327727065814 25.533973022832363 25.42633987397877 48 25.822177207062214 25.028555410673825 24.270332141203586 24.878935241060375 49 24.66959877476774 24.901456131282416 24.77345841212151 25.65548668182834 50 24.654953793187303 25.175630211331256 24.61596146048148 25.553454534999958 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 41.0 2 53.0 3 153.5 4 254.0 5 278.0 6 302.0 7 283.0 8 264.0 9 367.5 10 471.0 11 670.5 12 870.0 13 1567.5 14 2265.0 15 3029.0 16 3793.0 17 4309.0 18 4825.0 19 5116.0 20 5407.0 21 6173.0 22 6939.0 23 7418.0 24 7897.0 25 8846.0 26 9795.0 27 11893.5 28 13992.0 29 15820.0 30 17648.0 31 19703.0 32 21758.0 33 24974.0 34 28190.0 35 32972.0 36 37754.0 37 46185.5 38 54617.0 39 59871.5 40 65126.0 41 72547.0 42 79968.0 43 82364.5 44 84761.0 45 95009.5 46 105258.0 47 112890.0 48 120522.0 49 126495.5 50 132469.0 51 126555.0 52 120641.0 53 120415.5 54 120190.0 55 122215.5 56 124241.0 57 121732.0 58 119223.0 59 109452.5 60 99682.0 61 88039.5 62 76397.0 63 67170.5 64 57944.0 65 49995.5 66 42047.0 67 36979.5 68 31912.0 69 29369.5 70 26827.0 71 20713.0 72 14599.0 73 13211.0 74 11823.0 75 8663.5 76 5504.0 77 5062.5 78 4621.0 79 3996.0 80 3371.0 81 2681.5 82 1992.0 83 1765.5 84 1539.0 85 1292.5 86 1046.0 87 772.5 88 499.0 89 323.0 90 147.0 91 100.5 92 54.0 93 37.5 94 21.0 95 17.0 96 13.0 97 7.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014734412219739201 2 0.0035937590779851706 3 2.9947992316543094E-4 4 1.1979196926617236E-4 5 0.0 6 4.7916787706468945E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.7968795389925854E-4 47 5.989598463308618E-5 48 0.0 49 0.0 50 1.1979196926617236E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1669561.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.47461303894254 #Duplication Level Percentage of deduplicated Percentage of total 1 77.66847592413649 40.75623219443487 2 13.370086232499837 14.031802026954443 3 4.046022509776422 6.369403966421065 4 1.6344708616532038 3.4307290395471544 5 0.8769323520148414 2.300834291665428 6 0.5361164490180309 1.6879501923619886 7 0.3451188674945929 1.2676985316951797 8 0.23629530259022505 0.9919603653073517 9 0.1886900891350155 0.8911295470479164 >10 0.9232493782060052 8.668162714117509 >50 0.0763403695362198 2.8417321382007366 >100 0.08206392894485016 9.287814833920443 >500 0.011674106166207919 4.131167146282621 >1k 0.004463628828255969 3.3433830120432537 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2315 0.1386592044255945 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2166 0.1297347027152647 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2068 0.12386489622122222 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1986 0.11895342548130916 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1953 0.11697685798841731 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1892 0.11332320292579906 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1878 0.11248465914093585 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1858 0.11128673944827412 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1674 0.10026587827578627 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1672 0.1001460863065201 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 5.989598463308618E-5 14 0.0 0.0 0.0 0.0 5.989598463308618E-5 15 0.0 0.0 0.0 0.0 5.989598463308618E-5 16 0.0 0.0 0.0 0.0 1.1979196926617236E-4 17 0.0 0.0 0.0 0.0 1.1979196926617236E-4 18 0.0 0.0 0.0 0.0 1.7968795389925854E-4 19 0.0 0.0 0.0 2.3958393853234472E-4 1.7968795389925854E-4 20 0.0 0.0 0.0 4.1927189243160326E-4 2.9947992316543094E-4 21 0.0 0.0 0.0 5.390638616977756E-4 3.5937590779851707E-4 22 0.0 0.0 0.0 8.984397694962928E-4 3.5937590779851707E-4 23 0.0 0.0 0.0 0.001976567492891844 3.5937590779851707E-4 24 0.0 0.0 0.0 0.003054695216287395 3.5937590779851707E-4 25 0.0 0.0 0.0 0.0037734470318844296 3.5937590779851707E-4 26 0.0 0.0 0.0 0.0050911586938123254 4.1927189243160326E-4 27 0.0 0.0 0.0 0.006768246263538739 4.7916787706468945E-4 28 0.0 0.0 0.0 0.012278676849782667 5.390638616977756E-4 29 0.0 0.0 0.0 0.023599017945435955 5.390638616977756E-4 30 0.0 0.0 0.0 0.04588032422894402 5.390638616977756E-4 31 0.0 0.0 0.0 0.09367731996614678 5.390638616977756E-4 32 0.0 0.0 0.0 0.14938058567491694 5.390638616977756E-4 33 0.0 0.0 0.0 0.20262811601373057 5.390638616977756E-4 34 0.0 0.0 0.0 0.26515952397067255 5.989598463308619E-4 35 0.0 0.0 0.0 0.33260240266752755 5.989598463308619E-4 36 0.0 0.0 0.0 0.4326885929894146 5.989598463308619E-4 37 0.0 0.0 0.0 0.5770978119397854 5.989598463308619E-4 38 0.0 0.0 0.0 0.7636139080872157 6.58855830963948E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACT 370 0.0 19.621395 4 TTAACGG 260 0.0 18.61517 35 TAACGGC 280 0.0 18.071218 36 GTATCAA 3780 0.0 17.990387 1 TGCGTAC 135 5.5300916E-8 17.925718 16 GTCTATA 160 1.0968506E-9 17.88122 1 TATTAGA 385 0.0 17.716734 2 CTCTATA 150 9.586074E-9 17.602432 2 GGCGTTA 480 0.0 17.416464 42 CAAGACG 890 0.0 16.808794 4 GTATTAG 500 0.0 16.725819 1 CTATAGA 250 0.0 16.725819 1 GTATAGG 185 4.2018655E-10 16.654442 1 CAGAGCG 865 0.0 16.5316 14 ATAATAC 175 3.6288839E-9 16.342669 3 ACGGACC 880 0.0 16.249811 8 GCGAAAG 870 0.0 16.18372 18 CGCAATA 575 0.0 16.069378 36 GTGACTA 330 0.0 15.999816 24 AACGCAG 4255 0.0 15.821203 6 >>END_MODULE