##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062529_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1404154 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.267210719052184 32.0 32.0 32.0 32.0 32.0 2 31.393780881584213 32.0 32.0 32.0 32.0 32.0 3 31.499490796593538 32.0 32.0 32.0 32.0 32.0 4 31.606801675599684 32.0 32.0 32.0 32.0 32.0 5 31.544547820253335 32.0 32.0 32.0 32.0 32.0 6 35.13899045261417 36.0 36.0 36.0 36.0 36.0 7 35.17193911778907 36.0 36.0 36.0 36.0 36.0 8 35.106635739384714 36.0 36.0 36.0 36.0 36.0 9 35.23887978099268 36.0 36.0 36.0 36.0 36.0 10 35.123226512191685 36.0 36.0 36.0 36.0 36.0 11 35.24996830831946 36.0 36.0 36.0 36.0 36.0 12 35.16445703249074 36.0 36.0 36.0 36.0 36.0 13 35.19981426538685 36.0 36.0 36.0 36.0 36.0 14 35.15557766455816 36.0 36.0 36.0 36.0 36.0 15 35.122326326029764 36.0 36.0 36.0 36.0 36.0 16 35.1365961283449 36.0 36.0 36.0 36.0 36.0 17 35.11575795817268 36.0 36.0 36.0 36.0 36.0 18 35.128918195582536 36.0 36.0 36.0 36.0 36.0 19 35.10103236539582 36.0 36.0 36.0 36.0 36.0 20 35.093365827395 36.0 36.0 36.0 36.0 36.0 21 35.07618751219596 36.0 36.0 36.0 36.0 36.0 22 35.04856091283435 36.0 36.0 36.0 36.0 36.0 23 34.987371043347096 36.0 36.0 36.0 36.0 36.0 24 34.96702284792124 36.0 36.0 36.0 36.0 36.0 25 34.9372340925568 36.0 36.0 36.0 32.0 36.0 26 34.891851606020424 36.0 36.0 36.0 32.0 36.0 27 34.86046046231396 36.0 36.0 36.0 32.0 36.0 28 34.8258773610302 36.0 36.0 36.0 32.0 36.0 29 34.8067419955361 36.0 36.0 36.0 32.0 36.0 30 34.77694113323752 36.0 36.0 36.0 32.0 36.0 31 34.76264498053632 36.0 36.0 36.0 32.0 36.0 32 34.72532784865478 36.0 36.0 36.0 32.0 36.0 33 34.70180478779393 36.0 36.0 36.0 32.0 36.0 34 34.68211820071018 36.0 36.0 36.0 32.0 36.0 35 34.625828078686524 36.0 36.0 36.0 32.0 36.0 36 34.58578902314134 36.0 36.0 36.0 32.0 36.0 37 34.539856739360495 36.0 36.0 36.0 32.0 36.0 38 34.48089383358236 36.0 36.0 36.0 32.0 36.0 39 34.382967252879666 36.0 36.0 36.0 32.0 36.0 40 34.32326368760122 36.0 36.0 36.0 32.0 36.0 41 34.32969318180199 36.0 36.0 36.0 32.0 36.0 42 34.21967319823894 36.0 36.0 36.0 32.0 36.0 43 34.23371724184099 36.0 36.0 36.0 32.0 36.0 44 34.215341764507315 36.0 36.0 36.0 32.0 36.0 45 34.09012259339075 36.0 36.0 36.0 32.0 36.0 46 34.15477362169676 36.0 36.0 36.0 32.0 36.0 47 34.089775053163685 36.0 36.0 36.0 32.0 36.0 48 34.09169720700151 36.0 36.0 36.0 32.0 36.0 49 34.10772465128469 36.0 36.0 36.0 32.0 36.0 50 33.567325948578286 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 13.0 21 35.0 22 105.0 23 349.0 24 989.0 25 2395.0 26 4941.0 27 9395.0 28 16198.0 29 24550.0 30 35442.0 31 50510.0 32 76693.0 33 114471.0 34 240386.0 35 827680.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.59325760743288 17.8662932368798 11.622717200302295 25.917731955385015 2 15.329540647216094 20.19854626360118 38.288277380767546 26.183635708415174 3 19.16490106078788 24.759337532804658 28.825156946041897 27.25060446036556 4 12.064015907121101 16.140785428347808 37.36314684104487 34.43205182348622 5 13.287360218323633 37.6376807672093 34.46459576371253 14.610363250754546 6 32.84285657311501 36.55871477569252 17.23242060643353 13.366008044758942 7 28.903687845982596 30.838234864719162 21.336991054393646 18.921086234904603 8 27.693258716636493 34.53524328528068 19.59777916097522 18.17371883710761 9 27.28924320266865 14.33047942034848 18.50559126705475 39.87468610992811 10 15.348530146978181 27.59490768106632 32.93933571388894 24.117226458066565 11 37.0803344932251 21.371729881480235 22.153980261424316 19.393955363870344 12 22.82598632343746 24.24912082292968 30.572928610394584 22.351964243238275 13 30.11528649991383 20.394700296406235 25.38268594470407 24.107327258975868 14 22.90596330601914 20.04310068553734 25.553749802372106 31.497186206071415 15 25.7102853390725 27.497055166313665 23.39593805237887 23.39672144223497 16 25.337676636608236 26.321400644088893 25.080226242990438 23.26069647631243 17 23.561874267352444 26.31862317096273 26.619658527483452 23.499844034201377 18 24.30438541641444 25.099454903094674 28.27709781120874 22.319061869282145 19 25.153366368646175 26.62685147070763 25.2827681294217 22.937014031224496 20 24.432718918295286 24.77776654127681 27.515856522860027 23.273658017567875 21 25.493143914413945 25.18762187053557 24.654916768388652 24.664317446661833 22 23.968026299109642 26.304664588072246 25.41003337240787 24.317275740410242 23 23.21355065042723 25.908198103626813 26.05583148287154 24.82241976307442 24 23.556248103840463 26.77505458802952 25.60224875619056 24.06644855193946 25 24.796852766861754 25.174304242981894 25.146173425421996 24.882669564734353 26 23.161134747328287 25.51614708927938 26.421959414708073 24.90075874868426 27 25.256346526093292 25.946512989315984 25.70230900599222 23.0948314785985 28 23.791692364227856 25.159704704754603 25.990311603997853 25.05829132701969 29 23.685436212837054 25.816399055944007 26.333365143709308 24.164799587509634 30 24.310510100743933 25.77594765246547 26.585545460113348 23.327996786677243 31 23.95043563597725 25.251005231619892 26.013955734200096 24.784603398202762 32 23.6809495254794 25.97642423836702 25.79303979478034 24.54958644137324 33 23.45469229158625 25.503114330764287 26.265779964305906 24.77641341334355 34 23.318809760182997 26.198266002162157 26.979590557730848 23.503333679923998 35 24.696650082540806 25.570343423869463 26.331513494958532 23.401492998631205 36 23.738564288532455 26.196200701632442 26.190289669081878 23.87494534075322 37 24.806751965952454 25.61442690758991 25.7937519673768 23.78506915908084 38 24.122995056097835 26.09500097567646 25.474057688829006 24.307946279396706 39 24.521954144630858 25.26104686522988 26.095784365532555 24.1212146246067 40 25.054730464037423 25.75023822173351 25.379338733500738 23.815692580728324 41 23.65723417801751 25.416442925775947 26.709036188338313 24.217286707868226 42 25.518639693366968 26.259940149014994 25.48701923008445 22.734400927533592 43 24.462915036384896 24.779689407287233 25.683934953003728 25.073460603324136 44 23.776665522442695 25.549405549533738 26.926961002852963 23.7469679251706 45 24.596874701777725 25.495707735761176 25.933195361762312 23.974222200698783 46 24.015029690475544 25.132072408012228 26.74457360090133 24.1083243006109 47 24.729356416287967 24.788751653131815 26.718811981315426 23.763079949264785 48 23.774529004653335 27.23554538889609 25.19310559952826 23.796820006922317 49 23.534313187869706 25.380478209655067 27.30263204748197 23.782576554993256 50 23.19339616594761 27.329694606147186 24.8113810878294 24.665528140075804 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 20.0 2 25.0 3 98.5 4 172.0 5 198.5 6 225.0 7 220.0 8 215.0 9 287.0 10 359.0 11 518.0 12 677.0 13 1224.0 14 1771.0 15 2423.0 16 3075.0 17 3597.5 18 4120.0 19 4468.5 20 4817.0 21 5645.5 22 6474.0 23 7437.5 24 8401.0 25 9885.5 26 11370.0 27 14367.0 28 17364.0 29 19913.5 30 22463.0 31 25396.0 32 28329.0 33 33412.5 34 38496.0 35 43566.5 36 48637.0 37 53473.5 38 58310.0 39 60468.0 40 62626.0 41 67067.0 42 71508.0 43 76394.0 44 81280.0 45 93211.0 46 105142.0 47 113422.5 48 121703.0 49 119798.5 50 117894.0 51 112855.0 52 107816.0 53 103640.0 54 99464.0 55 95832.5 56 92201.0 57 85923.0 58 79645.0 59 71907.0 60 64169.0 61 55584.5 62 47000.0 63 39651.5 64 32303.0 65 27334.5 66 22366.0 67 18279.5 68 14193.0 69 12820.5 70 11448.0 71 8858.0 72 6268.0 73 5638.0 74 5008.0 75 3660.5 76 2313.0 77 2027.0 78 1741.0 79 1447.0 80 1153.0 81 916.0 82 679.0 83 562.0 84 445.0 85 359.0 86 273.0 87 203.0 88 133.0 89 87.0 90 41.0 91 25.0 92 9.0 93 9.0 94 9.0 95 6.0 96 3.0 97 4.0 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01645118697806651 2 0.003418428462974859 3 6.409553368077861E-4 4 2.1365177893592868E-4 5 0.0 6 7.121725964530956E-4 7 7.121725964530956E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 7.121725964530956E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1404154.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.978470975766704 #Duplication Level Percentage of deduplicated Percentage of total 1 79.74677321575186 44.64102429869015 2 12.526051189504047 14.023783859052404 3 3.3072336385346777 5.554016467343782 4 1.3492127952189787 3.0210747718919464 5 0.7192668567011893 2.013172943083924 6 0.4217944734426696 1.4166845813609568 7 0.2915162066269198 1.1423042058141444 8 0.21936951698343699 0.982397611154023 9 0.1596949345556372 0.8045530433099732 >10 1.0718520712674464 11.52607588982286 >50 0.11060290081266443 4.2886244791834764 >100 0.07152341934258163 7.554094707781685 >500 0.0038315859433901488 1.4442079049896888 >1k 0.0011494757830170445 1.1588696005929635 >5k 1.2771953144633829E-4 0.42911563592812435 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 6002 0.427445992391148 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 4807 0.34234136711500307 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2099 0.14948502799550478 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2095 0.1492001589569235 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1590 0.11323544283604219 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 7.121725964530956E-5 6 0.0 0.0 0.0 0.0 7.121725964530956E-5 7 0.0 0.0 0.0 0.0 7.121725964530956E-5 8 0.0 0.0 0.0 0.0 7.121725964530956E-5 9 0.0 0.0 0.0 0.0 7.121725964530956E-5 10 0.0 0.0 0.0 0.0 7.121725964530956E-5 11 0.0 0.0 0.0 0.0 7.121725964530956E-5 12 0.0 0.0 0.0 0.0 1.4243451929061912E-4 13 0.0 0.0 0.0 0.0 2.1365177893592868E-4 14 0.0 0.0 0.0 0.0 2.1365177893592868E-4 15 0.0 0.0 0.0 0.0 2.8486903858123823E-4 16 0.0 0.0 0.0 0.0 3.560862982265478E-4 17 0.0 0.0 0.0 0.0 3.560862982265478E-4 18 0.0 0.0 0.0 7.121725964530956E-5 3.560862982265478E-4 19 0.0 0.0 0.0 7.121725964530956E-5 3.560862982265478E-4 20 0.0 0.0 0.0 2.8486903858123823E-4 3.560862982265478E-4 21 0.0 0.0 0.0 5.697380771624765E-4 3.560862982265478E-4 22 0.0 0.0 0.0 9.258243753890242E-4 3.560862982265478E-4 23 0.0 0.0 0.0 0.0018516487507780485 3.560862982265478E-4 24 0.0 0.0 0.0 0.0028486903858123826 3.560862982265478E-4 25 0.0 0.0 0.0 0.004273035578718574 3.560862982265478E-4 26 0.0 0.0 0.0 0.005768598031270074 3.560862982265478E-4 27 0.0 0.0 0.0 0.00790511582062936 3.560862982265478E-4 28 0.0 0.0 0.0 0.012178151399347935 3.560862982265478E-4 29 0.0 0.0 0.0 0.018445270248135175 3.560862982265478E-4 30 0.0 0.0 0.0 0.031406811503581517 3.560862982265478E-4 31 0.0 0.0 0.0 0.05533581074440553 3.560862982265478E-4 32 0.0 0.0 0.0 0.08652897046905111 3.560862982265478E-4 33 0.0 0.0 0.0 0.11508709158682025 3.560862982265478E-4 34 0.0 0.0 0.0 0.15404293261280458 3.560862982265478E-4 35 0.0 0.0 0.0 0.1973430264771528 3.560862982265478E-4 36 0.0 0.0 0.0 0.2573791763581488 3.560862982265478E-4 37 0.0 0.0 0.0 0.3525254352442823 3.560862982265478E-4 38 0.0 0.0 0.0 0.46818226490826503 3.560862982265478E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCTAT 45 4.070188E-5 29.333143 11 TCGTATA 85 6.114935E-6 20.705748 44 TGCGCTA 70 8.124568E-4 18.857021 10 CCGAACG 70 8.124568E-4 18.857021 9 GTCCTAC 795 0.0 18.545383 1 GATTTCG 465 0.0 18.451492 41 TATGGCG 820 0.0 18.243784 16 TGGTATA 425 0.0 18.11753 44 TCGCGAT 85 1.4311123E-4 18.117529 43 ATTTCGT 465 0.0 17.978378 42 CCTTATA 370 0.0 17.838358 2 TAGGACC 815 0.0 17.815836 4 GTCCTAA 795 0.0 17.714993 1 TCCTACA 920 0.0 17.696167 2 CCTTTAT 325 0.0 17.604275 1 CGACACG 75 0.0012910673 17.599886 44 CGCACGA 225 0.0 17.599886 42 TAGGACG 675 0.0 17.599886 4 CCCTTAT 415 0.0 17.498224 1 ATGGCGA 860 0.0 17.395235 17 >>END_MODULE