##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062528_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2255887 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30554234321134 32.0 32.0 32.0 32.0 32.0 2 31.416527068953364 32.0 32.0 32.0 32.0 32.0 3 31.50234120769347 32.0 32.0 32.0 32.0 32.0 4 31.604884464514402 32.0 32.0 32.0 32.0 32.0 5 31.537837666514324 32.0 32.0 32.0 32.0 32.0 6 35.137682428242194 36.0 36.0 36.0 36.0 36.0 7 35.14827737382236 36.0 36.0 36.0 36.0 36.0 8 35.090961559688054 36.0 36.0 36.0 36.0 36.0 9 35.22500284810365 36.0 36.0 36.0 36.0 36.0 10 35.09291201199351 36.0 36.0 36.0 36.0 36.0 11 35.23426129056996 36.0 36.0 36.0 36.0 36.0 12 35.139636870109186 36.0 36.0 36.0 36.0 36.0 13 35.186735417155205 36.0 36.0 36.0 36.0 36.0 14 35.14475015814179 36.0 36.0 36.0 36.0 36.0 15 35.10028427842352 36.0 36.0 36.0 36.0 36.0 16 35.11708742503503 36.0 36.0 36.0 36.0 36.0 17 35.08663687498532 36.0 36.0 36.0 36.0 36.0 18 35.10027718586968 36.0 36.0 36.0 36.0 36.0 19 35.08735100649988 36.0 36.0 36.0 36.0 36.0 20 35.08706819091559 36.0 36.0 36.0 36.0 36.0 21 35.08200366419063 36.0 36.0 36.0 36.0 36.0 22 35.06258912791288 36.0 36.0 36.0 36.0 36.0 23 35.01885023496301 36.0 36.0 36.0 36.0 36.0 24 34.990222914534286 36.0 36.0 36.0 36.0 36.0 25 34.96516403525531 36.0 36.0 36.0 32.0 36.0 26 34.920314714345174 36.0 36.0 36.0 32.0 36.0 27 34.9040519316792 36.0 36.0 36.0 32.0 36.0 28 34.88675274958364 36.0 36.0 36.0 32.0 36.0 29 34.86092033865172 36.0 36.0 36.0 32.0 36.0 30 34.85646089542605 36.0 36.0 36.0 32.0 36.0 31 34.85650212089524 36.0 36.0 36.0 32.0 36.0 32 34.81654621884873 36.0 36.0 36.0 32.0 36.0 33 34.80157782725819 36.0 36.0 36.0 32.0 36.0 34 34.79504824488106 36.0 36.0 36.0 32.0 36.0 35 34.7633210351405 36.0 36.0 36.0 32.0 36.0 36 34.73953615584468 36.0 36.0 36.0 32.0 36.0 37 34.72618353667537 36.0 36.0 36.0 32.0 36.0 38 34.69131875843072 36.0 36.0 36.0 32.0 36.0 39 34.68040996734322 36.0 36.0 36.0 32.0 36.0 40 34.66515920345301 36.0 36.0 36.0 32.0 36.0 41 34.63981174588975 36.0 36.0 36.0 32.0 36.0 42 34.60575285907495 36.0 36.0 36.0 32.0 36.0 43 34.61222791744444 36.0 36.0 36.0 32.0 36.0 44 34.576472137123886 36.0 36.0 36.0 32.0 36.0 45 34.53241585238977 36.0 36.0 36.0 32.0 36.0 46 34.55100100315308 36.0 36.0 36.0 32.0 36.0 47 34.517519272906846 36.0 36.0 36.0 32.0 36.0 48 34.49044344863018 36.0 36.0 36.0 32.0 36.0 49 34.48057238682611 36.0 36.0 36.0 32.0 36.0 50 33.9774372563874 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 11.0 21 47.0 22 181.0 23 524.0 24 1382.0 25 3298.0 26 6915.0 27 12944.0 28 21771.0 29 33317.0 30 48703.0 31 70551.0 32 104875.0 33 172845.0 34 388278.0 35 1390241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.58572209510238 17.331780998409684 11.477140375619534 26.605356530868395 2 16.682078885142474 19.705681301329115 36.162206876006856 27.450032937521556 3 18.49983975204344 23.268446578916688 28.333301564489936 29.898412104549934 4 12.611674526106373 15.088617066642552 35.222923498793826 37.076784908457256 5 14.759655408119027 36.22864807884796 33.14870520939445 15.862991303638571 6 35.60046243635516 34.64531326605428 16.07458382057895 13.679640477011612 7 31.241486157317418 29.901834535005108 20.200586466065424 18.65609284161205 8 28.77391465086682 32.53465266655643 18.862469618380707 19.828963064196035 9 27.368791078631155 13.945733984016043 18.154366774576918 40.53110816277589 10 15.965914959392913 26.154146905407938 31.153821091216006 26.726117043983145 11 38.37098223448249 20.52846618647122 21.506396375350363 19.59415520369593 12 24.638601135606528 23.27035884332859 28.182927602313413 23.90811241875147 13 29.839615193491518 18.661794673226098 25.043408645911786 26.4551814873706 14 23.853278111891242 19.01526982512865 24.364651243612823 32.76680081936728 15 25.728682332049434 26.59619032336283 21.729279879710287 25.945847464877453 16 26.678286634037963 25.263543785659476 22.950528993695162 25.1076405866074 17 24.763297097771297 25.444581222375056 24.596090141039866 25.196031538813777 18 25.74672401587491 24.3008182590706 25.490727150783705 24.461730574270785 19 26.030337512472922 24.71223071013752 24.710235929370576 24.547195848018983 20 25.974040366383598 23.79990664426011 24.58562862412878 25.640424365227517 21 27.0975452227882 23.86848277418151 23.8480473534357 25.185924649594593 22 26.080650316261412 23.908821674135275 24.37604365821515 25.63448435138817 23 24.72437670858514 23.551223975314368 25.023416509780855 26.700982806319644 24 25.092347267394153 24.704428900915694 24.5018921603786 25.70133167131155 25 25.504867929998266 23.868128146489607 24.604202249492108 26.02280167402002 26 25.12781003658428 24.636163070224708 24.964193685233347 25.271833207957666 27 26.0131823978772 24.17288631921723 24.244122156827892 25.56980912607768 28 25.119033001209722 23.991804554040165 25.0767436489505 25.812418795799612 29 24.984717762902132 24.382338299746397 25.0544907612837 25.57845317606777 30 25.16992207499755 24.42418436739074 25.26952812796031 25.1363654296514 31 25.589402306055227 24.23428123837763 24.21167372301893 25.964642732548214 32 25.298518941773235 24.28836196139257 24.20994491302091 26.20317418381328 33 24.9000947299222 23.864271570340183 24.86791226688216 26.367721432855458 34 25.518698409982417 24.143141921559014 25.07022736511182 25.26793230334675 35 26.29231871986496 24.00000531941538 24.734040313189446 24.97363564753022 36 25.087471136630512 24.583811157207787 24.504507539606372 25.82421016655533 37 26.329953583667976 24.20409355610454 24.335438787492457 25.13051407273503 38 25.24346299260557 24.034847490144674 24.810418252332674 25.91127126491708 39 25.696366883624933 23.99752292557207 24.318815614434588 25.98729457636841 40 25.94872881487415 24.20054727918553 24.76604546238353 25.08467844355679 41 24.90293175145741 24.526982069580612 25.15901727347159 25.411068905490392 42 26.40659749358013 24.591568637968127 24.483939133476103 24.51789473497564 43 25.51413257844919 23.50849133844027 24.79875986696142 26.178616216149127 44 25.120362855054353 24.166370035378545 24.81489542694293 25.898371682624173 45 25.18809674420749 24.49355840961892 24.662582833271347 25.655762012902244 46 24.93034884313695 24.039789262307252 25.069052722102413 25.96080917245338 47 25.26221393181485 23.94632355255383 25.338059929420226 25.453402586211098 48 26.086058388562904 24.805852420799447 24.092474490078626 25.015614700559023 49 24.949166336789034 24.638867106375454 24.69693739092428 25.715029165911236 50 24.893290216478235 25.004599081956748 24.373981829747528 25.72812887181749 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 18.0 1 23.5 2 29.0 3 138.5 4 248.0 5 269.5 6 291.0 7 262.0 8 233.0 9 315.5 10 398.0 11 589.5 12 781.0 13 1478.5 14 2176.0 15 2857.0 16 3538.0 17 3964.5 18 4391.0 19 4572.5 20 4754.0 21 5654.5 22 6555.0 23 7242.0 24 7929.0 25 9670.5 26 11412.0 27 14633.5 28 17855.0 29 20377.5 30 22900.0 31 25393.0 32 27886.0 33 32474.5 34 37063.0 35 43910.0 36 50757.0 37 62424.0 38 74091.0 39 82340.0 40 90589.0 41 100473.0 42 110357.0 43 114822.0 44 119287.0 45 133645.5 46 148004.0 47 159468.0 48 170932.0 49 175132.0 50 179332.0 51 172328.5 52 165325.0 53 162339.5 54 159354.0 55 162103.5 56 164853.0 57 161890.5 58 158928.0 59 146157.0 60 133386.0 61 117859.5 62 102333.0 63 90331.5 64 78330.0 65 67245.0 66 56160.0 67 50355.5 68 44551.0 69 41320.5 70 38090.0 71 29694.0 72 21298.0 73 18976.0 74 16654.0 75 12256.0 76 7858.0 77 7113.5 78 6369.0 79 5390.5 80 4412.0 81 3451.5 82 2491.0 83 2102.0 84 1713.0 85 1461.0 86 1209.0 87 879.0 88 549.0 89 333.5 90 118.0 91 86.0 92 54.0 93 40.0 94 26.0 95 16.5 96 7.0 97 8.0 98 9.0 99 6.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01595824613555555 2 0.004477174610253085 3 3.5462769190123443E-4 4 4.4328461487654304E-5 5 4.4328461487654304E-5 6 3.9895615338888873E-4 7 8.865692297530861E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.865692297530861E-5 47 0.0 48 0.0 49 0.0 50 8.865692297530861E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2255887.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.666623128975274 #Duplication Level Percentage of deduplicated Percentage of total 1 78.43418808990177 40.52429636468115 2 12.692048664531011 13.115105901698751 3 3.6811307851695556 5.705747908974727 4 1.5977702291902776 3.3020556911308208 5 0.8793852029856578 2.27174319339287 6 0.5333403658345486 1.6533537408626051 7 0.3697053401029849 1.3370998533109386 8 0.26935630266013216 1.1133384461564197 9 0.20326697290738166 0.9451906275395981 >10 1.16136427635809 10.786873932326948 >50 0.08654553072188022 3.1088876653954887 >100 0.0764142160136716 8.553838309261787 >500 0.01049472712223206 3.751500491052616 >1k 0.004989296500733252 3.8309678742153603 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2755 0.1221249113984876 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2636 0.11684982448145673 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2560 0.11348086140839501 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2410 0.10683159218524688 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2405 0.1066099498778086 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.4328461487654304E-5 2 0.0 0.0 0.0 0.0 4.4328461487654304E-5 3 0.0 0.0 0.0 0.0 4.4328461487654304E-5 4 0.0 0.0 0.0 4.4328461487654304E-5 4.4328461487654304E-5 5 0.0 0.0 0.0 4.4328461487654304E-5 4.4328461487654304E-5 6 0.0 0.0 0.0 4.4328461487654304E-5 1.3298538446296292E-4 7 0.0 0.0 0.0 4.4328461487654304E-5 1.3298538446296292E-4 8 0.0 0.0 0.0 1.3298538446296292E-4 1.3298538446296292E-4 9 0.0 0.0 0.0 1.3298538446296292E-4 1.3298538446296292E-4 10 0.0 0.0 0.0 1.3298538446296292E-4 1.3298538446296292E-4 11 0.0 0.0 0.0 1.7731384595061722E-4 1.3298538446296292E-4 12 0.0 0.0 0.0 1.7731384595061722E-4 2.6597076892592584E-4 13 0.0 0.0 0.0 1.7731384595061722E-4 3.9895615338888873E-4 14 0.0 0.0 0.0 1.7731384595061722E-4 3.9895615338888873E-4 15 0.0 0.0 0.0 1.7731384595061722E-4 6.205984608271603E-4 16 0.0 0.0 0.0 1.7731384595061722E-4 6.205984608271603E-4 17 0.0 0.0 0.0 1.7731384595061722E-4 6.205984608271603E-4 18 0.0 0.0 0.0 2.216423074382715E-4 7.535838452901231E-4 19 0.0 0.0 0.0 2.6597076892592584E-4 7.535838452901231E-4 20 0.0 0.0 0.0 4.43284614876543E-4 8.86569229753086E-4 21 0.0 0.0 0.0 6.205984608271603E-4 9.308976912407403E-4 22 0.0 0.0 0.0 7.535838452901231E-4 9.308976912407403E-4 23 0.0 0.0 0.0 0.0010638830757037033 0.0010638830757037033 24 0.0 0.0 0.0 0.0018617953824814806 0.0010638830757037033 25 0.0 0.0 0.0 0.002349408458845678 0.0010638830757037033 26 0.0 0.0 0.0 0.003413291534549381 0.0011525399986790118 27 0.0 0.0 0.0 0.00474314537917901 0.001196868460166666 28 0.0 0.0 0.0 0.008466736144141972 0.001196868460166666 29 0.0 0.0 0.0 0.015381976136216042 0.001196868460166666 30 0.0 0.0 0.0 0.028990813812925915 0.001196868460166666 31 0.0 0.0 0.0 0.06303507223544441 0.001196868460166666 32 0.0 0.0 0.0 0.09885246911746909 0.0012411969216543205 33 0.0 0.0 0.0 0.13546777830627155 0.0012411969216543205 34 0.0 0.0 0.0 0.17908698441012338 0.001329853844629629 35 0.0 0.0 0.0 0.22882351819927152 0.001329853844629629 36 0.0 0.0 0.0 0.30249742119175294 0.001329853844629629 37 0.0 0.0 0.0 0.41540201260080845 0.001329853844629629 38 0.0 0.0 0.0 0.5629714608932096 0.0015071676905802462 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTACG 50 0.0025812532 21.999811 9 ATACGAA 955 0.0 21.88463 40 CGCAATA 985 0.0 21.44144 36 CGAATGC 995 0.0 20.783743 43 TACGAAT 1030 0.0 20.077497 41 CTAGCGG 1030 0.0 20.077497 29 TCTAGCG 1035 0.0 19.980507 28 CAATACG 1055 0.0 19.601728 38 AATACGA 1080 0.0 19.147984 39 TAGATCG 105 1.7942384E-6 18.856981 5 GCAATAC 1155 0.0 18.666508 37 CCGGTCC 1295 0.0 18.517216 9 ACCGTCG 560 0.0 18.464128 8 TTAACGG 265 0.0 18.263994 35 CGGTCCA 1165 0.0 18.128601 10 TAGCGGC 1180 0.0 18.08459 30 GCCGGTC 1130 0.0 17.716661 8 GTATACG 75 0.0012893057 17.604141 1 CGCCGGT 1125 0.0 17.20874 7 GCGCAAT 1255 0.0 16.82854 35 >>END_MODULE