##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062526_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1197227 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.181847719772442 32.0 32.0 32.0 32.0 32.0 2 31.411094136700893 32.0 32.0 32.0 32.0 32.0 3 31.50950237507173 32.0 32.0 32.0 32.0 32.0 4 31.61399216689901 32.0 32.0 32.0 32.0 32.0 5 31.548710478463985 32.0 32.0 32.0 32.0 32.0 6 35.14337631877664 36.0 36.0 36.0 36.0 36.0 7 35.15380708921533 36.0 36.0 36.0 36.0 36.0 8 35.09840907363432 36.0 36.0 36.0 36.0 36.0 9 35.20983405820283 36.0 36.0 36.0 36.0 36.0 10 35.10424004804435 36.0 36.0 36.0 36.0 36.0 11 35.221061670009114 36.0 36.0 36.0 36.0 36.0 12 35.13392364188245 36.0 36.0 36.0 36.0 36.0 13 35.17282353304762 36.0 36.0 36.0 36.0 36.0 14 35.13050908474333 36.0 36.0 36.0 36.0 36.0 15 35.098075803502596 36.0 36.0 36.0 36.0 36.0 16 35.109325967423054 36.0 36.0 36.0 36.0 36.0 17 35.08509831468886 36.0 36.0 36.0 36.0 36.0 18 35.10167745966304 36.0 36.0 36.0 36.0 36.0 19 35.0726253250219 36.0 36.0 36.0 36.0 36.0 20 35.05393296342297 36.0 36.0 36.0 36.0 36.0 21 35.0339793539571 36.0 36.0 36.0 36.0 36.0 22 35.020404651749416 36.0 36.0 36.0 36.0 36.0 23 34.98023933639986 36.0 36.0 36.0 36.0 36.0 24 34.964482925961406 36.0 36.0 36.0 36.0 36.0 25 34.937919041251156 36.0 36.0 36.0 32.0 36.0 26 34.89181667302859 36.0 36.0 36.0 32.0 36.0 27 34.87282862815489 36.0 36.0 36.0 32.0 36.0 28 34.85313060931636 36.0 36.0 36.0 32.0 36.0 29 34.81863172146969 36.0 36.0 36.0 32.0 36.0 30 34.804560037486624 36.0 36.0 36.0 32.0 36.0 31 34.79050672930029 36.0 36.0 36.0 32.0 36.0 32 34.75013677439617 36.0 36.0 36.0 32.0 36.0 33 34.71490034888956 36.0 36.0 36.0 32.0 36.0 34 34.67765260890374 36.0 36.0 36.0 32.0 36.0 35 34.63270541008514 36.0 36.0 36.0 32.0 36.0 36 34.595613029108094 36.0 36.0 36.0 32.0 36.0 37 34.5724820773337 36.0 36.0 36.0 32.0 36.0 38 34.524590574719745 36.0 36.0 36.0 32.0 36.0 39 34.47102512723151 36.0 36.0 36.0 32.0 36.0 40 34.4323866735381 36.0 36.0 36.0 32.0 36.0 41 34.40704979089178 36.0 36.0 36.0 32.0 36.0 42 34.33405527940817 36.0 36.0 36.0 32.0 36.0 43 34.33990964119587 36.0 36.0 36.0 32.0 36.0 44 34.29887314602828 36.0 36.0 36.0 32.0 36.0 45 34.202723460129114 36.0 36.0 36.0 32.0 36.0 46 34.20409663330346 36.0 36.0 36.0 32.0 36.0 47 34.135908227930045 36.0 36.0 36.0 32.0 36.0 48 34.09449502892935 36.0 36.0 36.0 32.0 36.0 49 34.081980276088 36.0 36.0 36.0 32.0 36.0 50 33.54297973567252 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 0.0 20 15.0 21 33.0 22 110.0 23 315.0 24 916.0 25 2196.0 26 4775.0 27 8837.0 28 14562.0 29 21536.0 30 29970.0 31 41294.0 32 60402.0 33 93753.0 34 201760.0 35 716751.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.51448788047133 18.027626594042783 11.561232545414295 25.896652980071593 2 15.942561638652197 20.925609286497675 36.713975103138296 26.41785397171183 3 18.827580964854324 24.98728300717414 28.500931744203434 27.684204283768103 4 12.261876024767314 15.817270466738446 35.880366481432446 36.04048702706179 5 13.96543846739173 37.187851593724496 33.43827026954788 15.408439669335891 6 33.895831836808334 35.37317347383684 17.01035233349315 13.720642355861672 7 29.63673555641495 30.767598792877205 21.166579103211003 18.42908654749684 8 28.48532483814682 32.39185217172683 19.831243364875668 19.291579625250684 9 27.669606515723416 14.075025037023053 18.812556014857666 39.44281243239586 10 16.100204890133618 26.553443916650725 31.695409475396062 25.6509417178196 11 37.22502081894244 21.181029161554157 22.260857798896954 19.333092220606453 12 24.51899263882288 24.0407207655691 28.893351052056126 22.54693554355189 13 29.72869806644855 19.513926765767895 25.682932309411665 25.07444285837189 14 23.586003322678156 19.85028737240306 25.32310079876247 31.24060850615631 15 25.324270167645736 26.969906291789275 23.326904588687025 24.378918951877964 16 25.64434313626405 25.58637585019382 24.467790987005806 24.30149002653632 17 23.465725380399874 25.693707208407428 26.050364717802054 24.790202693390643 18 24.67025885650758 24.206771146992175 27.68305425788092 23.439915738619327 19 25.259954879066377 25.341476595499437 25.87253712119757 23.526031404236626 20 25.076280438045583 24.125332956907922 26.572905555922144 24.22548104912435 21 26.414205493193855 24.200256091785434 24.85986366829348 24.52567474672723 22 25.04637800517362 24.769571685235967 25.60650570025567 24.577544609334737 23 24.022428495180947 24.33348061812839 26.151849231599357 25.49224165509131 24 24.231160840843046 25.655201561608614 25.758440128730808 24.355197468817526 25 24.800392907944776 24.542630595534515 25.908035819439423 24.748940677081286 26 23.648230452537405 25.35459023226172 26.773619372099027 24.22355994310185 27 24.985904928639265 25.216938809432126 25.79427293236788 24.002883329560724 28 23.902067026553862 24.652217165165837 26.48495231063115 24.960763497649154 29 23.730169800714485 25.099584289362 26.608738359559215 24.5615075503643 30 24.35511394246872 24.999352670796764 26.712979242867057 23.932554143867453 31 24.091838891037373 25.079955597392978 25.733883382182327 25.094322129387326 32 23.878345543493424 25.2814211507091 25.819999047799623 25.02023425799786 33 23.687905468219476 24.791706167669123 26.27012254150633 25.250265822605073 34 24.19749972227489 25.201904066647344 26.768691317519565 23.831904893558196 35 25.166655947451904 24.906053739182294 26.147171756066314 23.78011855729949 36 23.8893710215356 25.53191667077338 26.001167698356287 24.577544609334737 37 25.11453550579798 25.251936349581154 25.52523456286903 24.108293581751834 38 23.95719441676474 25.3733836607427 25.822504838263754 24.846917084228807 39 24.331058354013066 25.1110273991482 25.641419714055896 24.916494532782842 40 25.0881411795758 25.17467447693712 25.89475512997953 23.842429213507547 41 23.70887058176937 25.361773498258895 26.657768326307373 24.27158759366436 42 25.204743962506694 25.906365292463335 25.676417254204924 23.212473490825047 43 24.075384200322915 24.768068210957487 25.881808545914854 25.27473904280475 44 23.757984074866336 25.27265088408464 26.165464026454465 24.803901014594558 45 23.951681677743654 25.513290294990004 25.92348819396823 24.611539833298114 46 23.82415684256774 25.02869132477911 26.104177490298408 25.042974342354746 47 24.441730766178846 24.82210975863391 26.28540786333753 24.450751611849718 48 24.548978598043647 26.31723140223199 24.917580375317296 24.216209624407067 49 23.558021995828692 25.635823448686008 26.062308985681078 24.743845569804222 50 23.241373607511356 26.663030486282054 25.053644797519603 25.041951108686987 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 35.0 1 55.0 2 75.0 3 197.5 4 320.0 5 374.5 6 429.0 7 390.5 8 352.0 9 476.0 10 600.0 11 832.5 12 1065.0 13 1917.0 14 2769.0 15 3835.5 16 4902.0 17 5786.0 18 6670.0 19 7303.5 20 7937.0 21 8891.0 22 9845.0 23 9810.0 24 9775.0 25 10568.5 26 11362.0 27 13853.0 28 16344.0 29 18185.5 30 20027.0 31 20923.0 32 21819.0 33 24854.0 34 27889.0 35 32058.0 36 36227.0 37 42000.5 38 47774.0 39 49589.5 40 51405.0 41 55534.5 42 59664.0 43 59820.5 44 59977.0 45 67299.5 46 74622.0 47 80641.5 48 86661.0 49 86548.5 50 86436.0 51 81683.0 52 76930.0 53 75595.0 54 74260.0 55 75928.0 56 77596.0 57 76474.5 58 75353.0 59 69640.0 60 63927.0 61 57235.0 62 50543.0 63 44188.5 64 37834.0 65 32815.5 66 27797.0 67 24370.0 68 20943.0 69 19029.0 70 17115.0 71 13357.0 72 9599.0 73 8783.5 74 7968.0 75 5862.0 76 3756.0 77 3342.5 78 2929.0 79 2595.0 80 2261.0 81 1803.5 82 1346.0 83 1168.0 84 990.0 85 821.0 86 652.0 87 477.0 88 302.0 89 199.0 90 96.0 91 60.0 92 24.0 93 15.5 94 7.0 95 6.5 96 6.0 97 6.0 98 6.0 99 6.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01603705897043752 2 0.00400926474260938 3 8.352634880436209E-4 4 3.341053952174483E-4 5 0.0 6 7.517371392392587E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.352634880436208E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1197227.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.21537693316235 #Duplication Level Percentage of deduplicated Percentage of total 1 75.76418593754163 38.80291340825393 2 14.380833429725826 14.7303960943286 3 4.553729409222735 6.996629044349074 4 1.9087222496945389 3.910237179152778 5 0.9799496745196636 2.5094245978027168 6 0.5503341661188107 1.6911343054183487 7 0.3575703965764968 1.281917184856394 8 0.22664155140139589 0.9286025986991344 9 0.18267953984949065 0.8420401342231484 >10 0.8702326807168868 8.250485264927738 >50 0.1037234874597365 3.7932225149819345 >100 0.11089823837012994 11.961049852357716 >500 0.008530631527279573 3.0017516852527355 >1k 0.0019686072755260554 1.3001961353958096 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2047 0.17097843600252918 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1917 0.1601200106579621 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1300 0.1085842534456707 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1260 0.10524319949349623 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1214 0.10140098744849556 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1213 0.10131746109969121 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.352634880436208E-5 2 0.0 0.0 0.0 0.0 8.352634880436208E-5 3 0.0 0.0 0.0 0.0 8.352634880436208E-5 4 0.0 0.0 0.0 0.0 8.352634880436208E-5 5 0.0 0.0 0.0 0.0 8.352634880436208E-5 6 0.0 0.0 0.0 0.0 1.6705269760872415E-4 7 0.0 0.0 0.0 0.0 1.6705269760872415E-4 8 0.0 0.0 0.0 0.0 1.6705269760872415E-4 9 0.0 0.0 0.0 0.0 2.505790464130862E-4 10 8.352634880436208E-5 0.0 0.0 0.0 2.505790464130862E-4 11 8.352634880436208E-5 0.0 0.0 0.0 3.341053952174483E-4 12 8.352634880436208E-5 0.0 0.0 0.0 4.176317440218104E-4 13 8.352634880436208E-5 0.0 0.0 0.0 4.176317440218104E-4 14 8.352634880436208E-5 0.0 0.0 8.352634880436208E-5 5.846844416305346E-4 15 8.352634880436208E-5 0.0 0.0 8.352634880436208E-5 6.682107904348966E-4 16 8.352634880436208E-5 0.0 0.0 2.505790464130862E-4 7.517371392392587E-4 17 8.352634880436208E-5 0.0 0.0 2.505790464130862E-4 7.517371392392587E-4 18 8.352634880436208E-5 0.0 0.0 3.341053952174483E-4 7.517371392392587E-4 19 8.352634880436208E-5 0.0 0.0 3.341053952174483E-4 7.517371392392587E-4 20 8.352634880436208E-5 0.0 0.0 6.682107904348966E-4 8.352634880436208E-4 21 8.352634880436208E-5 0.0 0.0 0.0012528952320654313 9.187898368479829E-4 22 8.352634880436208E-5 0.0 0.0 0.0025057904641308626 9.187898368479829E-4 23 8.352634880436208E-5 0.0 0.0 0.00442689648663119 0.001002316185652345 24 8.352634880436208E-5 0.0 0.0 0.00843616122924057 0.001002316185652345 25 8.352634880436208E-5 0.0 0.0 0.010607846298153985 0.001002316185652345 26 8.352634880436208E-5 0.0 0.0 0.01445005834315464 0.0012528952320654313 27 8.352634880436208E-5 0.0 0.0 0.020380429108264347 0.0012528952320654313 28 8.352634880436208E-5 0.0 0.0 0.030821222708809607 0.0012528952320654313 29 8.352634880436208E-5 0.0 0.0 0.05120165181707396 0.0012528952320654313 30 8.352634880436208E-5 0.0 0.0 0.0819393481770792 0.0013364215808697932 31 8.352634880436208E-5 0.0 0.0 0.1490945326157863 0.0013364215808697932 32 8.352634880436208E-5 0.0 0.0 0.2288621957239521 0.0014199479296741553 33 8.352634880436208E-5 0.0 0.0 0.3026994880670082 0.0014199479296741553 34 8.352634880436208E-5 0.0 0.0 0.3835529937096307 0.0014199479296741553 35 8.352634880436208E-5 0.0 0.0 0.47810482055616854 0.0014199479296741553 36 8.352634880436208E-5 0.0 0.0 0.6039790282043422 0.0014199479296741553 37 8.352634880436208E-5 0.0 0.0 0.7980107364768753 0.0014199479296741553 38 8.352634880436208E-5 0.0 0.0 1.037397252150177 0.0015034742784785175 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 485 0.0 21.319506 4 TTAGGAC 320 0.0 21.31242 3 TACCGTC 230 0.0 19.130362 7 AGGACGT 555 0.0 19.026955 5 ACGGAAT 410 0.0 18.780416 18 GGACGTG 520 0.0 18.615314 6 GATATAC 380 0.0 18.52934 1 ATACCGT 250 0.0 18.47993 6 AATCGAG 420 0.0 18.333263 22 GTCCTAA 290 0.0 18.20987 1 GACGTGA 270 0.0 17.925858 7 ATACACT 380 0.0 17.368357 4 CGTCGTA 255 0.0 17.254837 10 ACCGTCG 255 0.0 17.254837 8 TTAGAGA 205 5.456968E-12 17.170668 4 GTTATAT 220 1.8189894E-12 17.002777 1 GATATAT 250 0.0 16.72273 1 CTAGACA 225 1.8189894E-12 16.622158 4 TCTACAC 450 0.0 16.622158 3 TTAACGG 265 0.0 16.60371 35 >>END_MODULE