##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062523_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4267026 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.158817640201864 32.0 32.0 32.0 32.0 32.0 2 30.796533463822342 32.0 32.0 32.0 32.0 32.0 3 30.773807565269113 32.0 32.0 32.0 32.0 32.0 4 30.851598748167927 32.0 32.0 32.0 32.0 32.0 5 30.63093077004921 32.0 32.0 32.0 32.0 32.0 6 34.292359830945486 36.0 36.0 36.0 32.0 36.0 7 34.17696329949712 36.0 36.0 36.0 32.0 36.0 8 34.17393355465845 36.0 36.0 36.0 32.0 36.0 9 34.34466722255735 36.0 36.0 36.0 32.0 36.0 10 33.98401767413651 36.0 36.0 36.0 32.0 36.0 11 34.32534697468448 36.0 36.0 36.0 32.0 36.0 12 34.0877257368481 36.0 36.0 36.0 32.0 36.0 13 34.22096068784207 36.0 36.0 36.0 32.0 36.0 14 34.11938291447017 36.0 36.0 36.0 32.0 36.0 15 34.05597387969982 36.0 36.0 36.0 32.0 36.0 16 34.06417912616422 36.0 36.0 36.0 32.0 36.0 17 33.98310978184806 36.0 36.0 36.0 32.0 36.0 18 33.99538413874207 36.0 36.0 36.0 32.0 36.0 19 33.979137225786765 36.0 36.0 36.0 32.0 36.0 20 33.96994042220507 36.0 36.0 36.0 32.0 36.0 21 33.9572123535221 36.0 36.0 36.0 32.0 36.0 22 33.906807223579136 36.0 36.0 36.0 32.0 36.0 23 33.87438229811583 36.0 36.0 36.0 32.0 36.0 24 33.840359304114855 36.0 36.0 36.0 32.0 36.0 25 33.392378907463886 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 33.0 4 177.0 5 423.0 6 697.0 7 206.0 8 599.0 9 785.0 10 498.0 11 166.0 12 333.0 13 255.0 14 527.0 15 675.0 16 1069.0 17 1612.0 18 2202.0 19 3402.0 20 5500.0 21 8385.0 22 13147.0 23 19722.0 24 27647.0 25 39212.0 26 53407.0 27 68594.0 28 92278.0 29 122260.0 30 156758.0 31 213074.0 32 303266.0 33 435038.0 34 954691.0 35 1740387.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.35924621061553 17.47506712516781 11.100941814854536 26.064744849362125 2 16.762333982521145 19.888700616611242 37.40833444656153 25.940630954306084 3 19.5852859113222 23.705286989414773 28.060546616371308 28.648880482891727 4 12.911004562185799 15.278493972401868 35.67067225204717 36.13982921336516 5 14.781629766610536 36.34410346566465 33.410447608984676 15.463819158740144 6 34.13624872862936 35.101810469294605 16.936133935994665 13.825806866081356 7 30.070646891009144 30.289235993447722 20.697322922541694 18.942794193001443 8 27.80004550497623 33.235544546791544 19.583089975535213 19.381319972697014 9 27.437339692688507 14.395696269164743 18.690911786466792 39.47605225167995 10 16.13858256927122 26.614537518838077 31.5283346069983 25.718545304892398 11 37.2707535723646 21.23160438418725 22.36826637928668 19.129375664161476 12 25.01102915639625 23.500433657042986 28.8309422748034 22.65759491175736 13 29.66742508729033 19.732576367450687 25.24351074056407 25.356487804694915 14 23.292406930073923 20.02677325912221 24.99369385329615 31.687125957507718 15 24.93391869970583 27.73408593830285 22.26645369241143 25.06554166957989 16 25.416272702317798 25.864277619931354 24.324543724763796 24.39490595298705 17 23.819957595342434 26.062955617772417 25.460603933177467 24.656482853707686 18 24.564880602345575 24.965493160347805 26.800632832677145 23.66899340462948 19 25.548827019522925 24.95201166175285 25.336739684032576 24.16242163469165 20 25.573234904827856 24.70824693816785 25.258469854705957 24.460048302298336 21 26.327470488271103 24.41425911750861 24.41684035249345 24.841430041726838 22 25.709364967116727 24.9970837967769 24.85738768744967 24.436163548656705 23 24.296688336390844 24.7363644662834 25.618744119757125 25.34820307756863 24 24.686810659607822 25.251541775787782 25.45448358724527 24.60716397735913 25 24.66275332952403 24.999912002712662 25.546058366840747 24.79127630092256 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 361.0 1 361.0 2 1129.0 3 1897.0 4 1897.0 5 1897.0 6 4964.5 7 8032.0 8 8032.0 9 8032.0 10 8867.5 11 9703.0 12 9703.0 13 9703.0 14 11155.5 15 12608.0 16 12608.0 17 12608.0 18 20899.0 19 29190.0 20 29190.0 21 29190.0 22 47846.5 23 66503.0 24 66503.0 25 66503.0 26 100313.0 27 134123.0 28 134123.0 29 134123.0 30 170772.5 31 207422.0 32 207422.0 33 207422.0 34 245397.5 35 283373.0 36 283373.0 37 283373.0 38 317378.0 39 351383.0 40 351383.0 41 351383.0 42 396343.5 43 441304.0 44 441304.0 45 441304.0 46 493168.5 47 545033.0 48 545033.0 49 545033.0 50 547627.0 51 550221.0 52 550221.0 53 550221.0 54 510971.0 55 471721.0 56 471721.0 57 471721.0 58 433581.5 59 395442.0 60 395442.0 61 395442.0 62 351544.5 63 307647.0 64 307647.0 65 307647.0 66 256391.0 67 205135.0 68 205135.0 69 205135.0 70 157912.5 71 110690.0 72 110690.0 73 110690.0 74 87913.0 75 65136.0 76 65136.0 77 65136.0 78 52197.5 79 39259.0 80 39259.0 81 39259.0 82 28254.5 83 17250.0 84 17250.0 85 17250.0 86 12726.0 87 8202.0 88 8202.0 89 8202.0 90 5549.0 91 2896.0 92 2896.0 93 2896.0 94 1775.0 95 654.0 96 654.0 97 654.0 98 1247.5 99 1841.0 100 1841.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00867114472703002 2 0.003655942101126171 3 0.005413606572821445 4 0.015233092088025712 5 0.035036111802459136 6 0.04555866310634151 7 0.0670490407136024 8 0.08802383674249933 9 0.09655436831179375 10 0.11827910118194732 11 0.11888842486546836 12 0.1310983340621782 13 0.11949774854898938 14 0.12446608012231469 15 0.11370917355553961 16 0.11239678408334049 17 0.1225678024928838 18 0.13011404195802884 19 0.1306296235363928 20 0.11991958802219625 21 0.12889539459098678 22 0.1487921564105773 23 0.13908984852681938 24 0.13372311300657647 25 0.12962189590595416 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 4267026.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.83796915089732 #Duplication Level Percentage of deduplicated Percentage of total 1 74.17857002425679 34.743735744538164 2 14.570519547340316 13.649070901417442 3 4.98790638234839 7.008702157919933 4 2.1406783486822887 4.010601058302995 5 1.1120921086864766 2.6044067939806776 6 0.670038992792332 1.8829959404583336 7 0.44029875321062517 1.4435889594040474 8 0.3053449876159155 1.14413912882683 9 0.21430488884979357 0.9033845195549801 >10 1.1821759644448235 10.019108482442372 >50 0.09307413232878238 3.0735417547090615 >100 0.082745834315561 8.064240786667812 >500 0.013812098654378688 4.423006028129645 >1k 0.008337484848855702 6.698790325999128 >5k 1.0045162468500834E-4 0.33068741764874954 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 8854 0.20749814976519948 No Hit TATCAACGCAGAGTACTTTTTTTTT 5203 0.12193504328307352 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 4325 0.10135865120109416 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3435526289270324E-5 2 0.0 0.0 0.0 0.0 2.3435526289270324E-5 3 0.0 0.0 0.0 0.0 2.3435526289270324E-5 4 0.0 0.0 0.0 0.0 2.3435526289270324E-5 5 0.0 0.0 0.0 0.0 7.030657886781097E-5 6 0.0 0.0 0.0 0.0 1.1717763144635163E-4 7 0.0 0.0 0.0 0.0 1.1717763144635163E-4 8 0.0 0.0 0.0 4.687105257854065E-5 1.1717763144635163E-4 9 0.0 0.0 0.0 7.030657886781097E-5 1.4061315773562194E-4 10 0.0 0.0 0.0 7.030657886781097E-5 1.4061315773562194E-4 11 0.0 0.0 0.0 1.1717763144635163E-4 1.4061315773562194E-4 12 0.0 0.0 0.0 1.1717763144635163E-4 1.6404868402489228E-4 13 0.0 0.0 0.0 1.1717763144635163E-4 1.6404868402489228E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAT 265 0.0 13.61267 1 CGAACGA 250 0.0 12.922362 16 CGTTATT 280 0.0 12.885535 2 TATTCCG 85 3.948604E-6 12.293912 5 AAGACGG 735 0.0 11.761708 5 CGCAAGA 820 0.0 11.578787 2 TCGCGTA 295 0.0 11.272454 9 AACCGCG 255 0.0 11.1774645 7 GCGCAAG 845 0.0 11.009687 1 ACGAACG 310 0.0 10.726887 15 CAAGACG 825 0.0 10.708034 4 CCGTCGT 630 0.0 10.707553 9 CGGTTCT 685 0.0 10.541207 12 GTCCTAA 1020 0.0 10.516805 1 ACGGTAT 645 0.0 10.45854 9 CGTCGTA 610 0.0 10.279844 10 GCGTAAC 325 0.0 10.230959 11 TGTAGGA 2145 0.0 10.224959 2 GTATCAA 7015 0.0 10.176437 1 CGACCAT 580 0.0 10.156314 10 >>END_MODULE