##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062523_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4267026 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27013404652327 32.0 32.0 32.0 32.0 32.0 2 31.396772365577338 32.0 32.0 32.0 32.0 32.0 3 31.486323964278633 32.0 32.0 32.0 32.0 32.0 4 31.585631069508366 32.0 32.0 32.0 32.0 32.0 5 31.532665842673563 32.0 32.0 32.0 32.0 32.0 6 35.11137171416345 36.0 36.0 36.0 36.0 36.0 7 35.12574167581824 36.0 36.0 36.0 36.0 36.0 8 35.06532231113661 36.0 36.0 36.0 36.0 36.0 9 35.205293335451906 36.0 36.0 36.0 36.0 36.0 10 35.07195737733963 36.0 36.0 36.0 36.0 36.0 11 35.203733466822094 36.0 36.0 36.0 36.0 36.0 12 35.116396056644604 36.0 36.0 36.0 36.0 36.0 13 35.15911433396469 36.0 36.0 36.0 36.0 36.0 14 35.120650776442425 36.0 36.0 36.0 36.0 36.0 15 35.08423735875994 36.0 36.0 36.0 36.0 36.0 16 35.09617986860169 36.0 36.0 36.0 36.0 36.0 17 35.074678710652336 36.0 36.0 36.0 36.0 36.0 18 35.08671074420451 36.0 36.0 36.0 36.0 36.0 19 35.06794498088364 36.0 36.0 36.0 36.0 36.0 20 35.05832586911821 36.0 36.0 36.0 36.0 36.0 21 35.05391905275478 36.0 36.0 36.0 36.0 36.0 22 35.034052054053575 36.0 36.0 36.0 36.0 36.0 23 34.99745466748972 36.0 36.0 36.0 36.0 36.0 24 34.979989107167384 36.0 36.0 36.0 36.0 36.0 25 34.95021052133266 36.0 36.0 36.0 32.0 36.0 26 34.90955996049708 36.0 36.0 36.0 32.0 36.0 27 34.89222868574037 36.0 36.0 36.0 32.0 36.0 28 34.874282697129104 36.0 36.0 36.0 32.0 36.0 29 34.85148906990489 36.0 36.0 36.0 32.0 36.0 30 34.838529926932715 36.0 36.0 36.0 32.0 36.0 31 34.83906378822159 36.0 36.0 36.0 32.0 36.0 32 34.796319731822585 36.0 36.0 36.0 32.0 36.0 33 34.78024155465657 36.0 36.0 36.0 32.0 36.0 34 34.76489222235815 36.0 36.0 36.0 32.0 36.0 35 34.746484085168454 36.0 36.0 36.0 32.0 36.0 36 34.715496694887726 36.0 36.0 36.0 32.0 36.0 37 34.70891295248728 36.0 36.0 36.0 32.0 36.0 38 34.674471399986786 36.0 36.0 36.0 32.0 36.0 39 34.65499928990355 36.0 36.0 36.0 32.0 36.0 40 34.65610849336282 36.0 36.0 36.0 32.0 36.0 41 34.62859799776238 36.0 36.0 36.0 32.0 36.0 42 34.60450088656596 36.0 36.0 36.0 32.0 36.0 43 34.595528595326115 36.0 36.0 36.0 32.0 36.0 44 34.56246880145563 36.0 36.0 36.0 32.0 36.0 45 34.524985786353305 36.0 36.0 36.0 32.0 36.0 46 34.50968613737062 36.0 36.0 36.0 32.0 36.0 47 34.48788570775055 36.0 36.0 36.0 32.0 36.0 48 34.445568177930014 36.0 36.0 36.0 32.0 36.0 49 34.431843396313965 36.0 36.0 36.0 32.0 36.0 50 33.91089859775872 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 27.0 21 107.0 22 350.0 23 1053.0 24 2747.0 25 6467.0 26 13486.0 27 25037.0 28 42533.0 29 64976.0 30 94861.0 31 137831.0 32 203862.0 33 333898.0 34 733111.0 35 2606675.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.83712584843472 18.069368313134348 11.64716460254651 26.446341235884425 2 16.13565116797942 20.41838299675452 37.09677570557807 26.349190129687994 3 18.999592688262158 23.989372397763116 28.433546550950762 28.577488363023967 4 12.622635438293308 15.79686699162436 35.85973526704956 35.72076230303278 5 14.518964730939066 36.576177412558536 33.34071552411446 15.564142332387945 6 34.36242312234313 35.290356917623996 16.652187352868182 13.695032607164695 7 30.088035575137244 30.356138058717725 20.679981954640528 18.875844411504502 8 27.81567302378753 33.419786989814455 19.435550662217665 19.328989324180355 9 27.468803799180037 14.230543708897017 18.607081372365673 39.69357111955728 10 16.10008938309727 26.710102071091203 31.511877359078667 25.677931186732867 11 37.52744886016631 21.052437927493294 22.339821693141783 19.080291519198617 12 25.035282184828496 23.39432663405379 28.776693650331637 22.793697530786076 13 29.847439410962107 19.580710312053405 25.253068530634685 25.3187817463498 14 23.36784448934691 19.901589538006096 24.926775698109175 31.803790274537818 15 25.0234706795787 27.70613537391148 22.142002415734048 25.12839153077577 16 25.514093422444578 25.812615156317303 24.257363325182457 24.415928096055662 17 23.966833105774374 26.01563712056125 25.28695630164897 24.730573472015404 18 24.741142894371865 24.902285573136886 26.725452340810673 23.631119191680575 19 25.728059777465617 24.86270296923431 25.25480275958009 24.154434493719982 20 25.70903013011873 24.623168455031678 25.196096766225466 24.471704648624122 21 26.518024497624342 24.37472844083912 24.336692581671638 24.7705544798649 22 25.806076644482594 24.944750746773046 24.773882324597977 24.475290284146382 23 24.383282407934708 24.664391545774507 25.595461569720925 25.35686447656986 24 24.839103394261013 25.099987672913173 25.415523598871907 24.645385333953907 25 24.83197899426908 24.818714486389347 25.470573650125406 24.878732869216172 26 24.2059457805038 25.532185648739897 25.95946216404587 24.302406406710436 27 25.06790443742316 25.149905343909317 25.107041766326244 24.67514845234128 28 24.226967447585274 25.178356072824492 25.555011851345643 25.03966462824459 29 24.41112381316636 25.003503611180243 25.347279346317553 25.23809322933584 30 24.291063611986427 25.24936571748098 25.685219635408828 24.77435103512376 31 24.99016879672165 24.896496998143437 24.843603015308556 25.269731189826356 32 24.552182245901477 25.27099670824598 24.9754278506857 25.201393195166844 33 24.19303280551841 24.87849851395328 25.736801228771515 25.1916674517568 34 24.767437554868426 24.970436083586087 25.918403121987073 24.343723239558418 35 25.17908257413946 25.01590100458727 25.581611173683967 24.223405247589305 36 24.129874062168827 25.31554764372188 25.514913665864704 25.03966462824459 37 25.08916045976753 25.044281426923575 24.927455328371565 24.93910278493733 38 24.425396048676525 25.019158542741476 25.478166760643127 25.077278647938865 39 25.067506033476246 24.4855081736085 25.213134393837773 25.233851399077484 40 25.484822450109277 24.60988051162566 25.633755219677596 24.271541818587465 41 24.30505462118112 24.75961008908781 26.379708021465063 24.555627268266 42 25.162537092579235 25.30661870820567 25.62332641047887 23.90751778873623 43 24.17046439370184 24.525840714352338 26.046126740263592 25.257568151682225 44 23.819283032257125 24.97060013227011 25.79763985501846 25.4124769804543 45 23.92612559660991 25.164107272840614 25.84125336944279 25.06851376110668 46 23.931871907825155 24.514268854078757 26.02166710686448 25.5321921312316 47 24.29111048303901 24.500108506486722 26.226392808480657 24.982388201993615 48 24.474587218357705 25.265489359568 25.36975401602896 24.890169406045334 49 23.887738204548086 25.050679325600544 25.840198770759777 25.221383699091593 50 23.554115572324978 25.725956609112906 25.422466472542343 25.297461346019766 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 17.0 1 27.0 2 37.0 3 135.0 4 233.0 5 284.0 6 335.0 7 433.0 8 531.0 9 710.5 10 890.0 11 1212.0 12 1534.0 13 2767.0 14 4000.0 15 5649.0 16 7298.0 17 8878.5 18 10459.0 19 11878.5 20 13298.0 21 15528.5 22 17759.0 23 19762.5 24 21766.0 25 25808.5 26 29851.0 27 39317.5 28 48784.0 29 57426.5 30 66069.0 31 73752.5 32 81436.0 33 95695.0 34 109954.0 35 128219.0 36 146484.0 37 164677.0 38 182870.0 39 190199.0 40 197528.0 41 208097.5 42 218667.0 43 222487.0 44 226307.0 45 245535.5 46 264764.0 47 281360.0 48 297956.0 49 306528.5 50 315101.0 51 304167.0 52 293233.0 53 287325.0 54 281417.0 55 284200.5 56 286984.0 57 279000.0 58 271016.0 59 248184.5 60 225353.0 61 199467.0 62 173581.0 63 152703.0 64 131825.0 65 113101.5 66 94378.0 67 83703.0 68 73028.0 69 66088.0 70 59148.0 71 47509.5 72 35871.0 73 32102.0 74 28333.0 75 21578.0 76 14823.0 77 13176.0 78 11529.0 79 10143.0 80 8757.0 81 7088.0 82 5419.0 83 4677.0 84 3935.0 85 3236.5 86 2538.0 87 1914.0 88 1290.0 89 867.5 90 445.0 91 277.0 92 109.0 93 78.5 94 48.0 95 36.0 96 24.0 97 17.0 98 10.0 99 7.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01499873682513301 2 0.003984039469175955 3 5.624526309424878E-4 4 2.1091973660343293E-4 5 0.0 6 4.4527499949613614E-4 7 2.3435526289270324E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.1717763144635163E-4 47 0.0 48 0.0 49 0.0 50 2.3435526289270324E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 4267026.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.0141991805322 #Duplication Level Percentage of deduplicated Percentage of total 1 75.22639634109001 38.37614366578025 2 14.42438016444269 14.716964055291948 3 4.721210897102064 7.225463792341914 4 1.9393921106256418 3.9574614168243705 5 1.0022451687266376 2.55643673325734 6 0.6173439176585787 1.8895983346994887 7 0.39353173569293676 1.4052994443950024 8 0.27597087934093567 1.126274672538009 9 0.19415667952904647 0.8914272769552983 >10 1.0456026178850006 9.500157983017889 >50 0.07660382236365765 2.729365760878275 >100 0.06696071681004014 7.146541610281931 >500 0.010572459560668802 3.756765525794842 >1k 0.005632489172270152 4.7220997279435695 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.37421051570813E-5 2 0.0 0.0 0.0 0.0 9.37421051570813E-5 3 0.0 0.0 0.0 0.0 9.37421051570813E-5 4 0.0 0.0 0.0 0.0 1.4061315773562194E-4 5 2.3435526289270324E-5 0.0 0.0 0.0 1.4061315773562194E-4 6 2.3435526289270324E-5 0.0 0.0 0.0 1.6404868402489228E-4 7 2.3435526289270324E-5 0.0 0.0 0.0 1.6404868402489228E-4 8 2.3435526289270324E-5 0.0 0.0 0.0 1.6404868402489228E-4 9 2.3435526289270324E-5 0.0 0.0 0.0 1.6404868402489228E-4 10 2.3435526289270324E-5 0.0 0.0 0.0 1.6404868402489228E-4 11 2.3435526289270324E-5 0.0 0.0 4.687105257854065E-5 1.6404868402489228E-4 12 2.3435526289270324E-5 0.0 0.0 4.687105257854065E-5 1.6404868402489228E-4 13 4.687105257854065E-5 0.0 0.0 4.687105257854065E-5 1.6404868402489228E-4 14 4.687105257854065E-5 0.0 0.0 4.687105257854065E-5 1.6404868402489228E-4 15 4.687105257854065E-5 0.0 0.0 7.030657886781097E-5 2.3435526289270327E-4 16 4.687105257854065E-5 0.0 0.0 1.1717763144635163E-4 2.577907891819736E-4 17 4.687105257854065E-5 0.0 0.0 1.1717763144635163E-4 2.577907891819736E-4 18 4.687105257854065E-5 0.0 0.0 2.1091973660343293E-4 3.515328943390549E-4 19 4.687105257854065E-5 0.0 0.0 3.046618417605142E-4 3.515328943390549E-4 20 4.687105257854065E-5 0.0 0.0 4.2183947320686586E-4 3.515328943390549E-4 21 4.687105257854065E-5 0.0 0.0 5.624526309424878E-4 3.515328943390549E-4 22 4.687105257854065E-5 0.0 0.0 9.139855252815427E-4 3.515328943390549E-4 23 4.687105257854065E-5 0.0 0.0 0.0016170513139596525 3.984039469175955E-4 24 4.687105257854065E-5 0.0 0.0 0.0024841657866626547 4.2183947320686586E-4 25 4.687105257854065E-5 0.0 0.0 0.003093489470183683 4.2183947320686586E-4 26 4.687105257854065E-5 0.0 0.0 0.004124652626911578 4.6871052578540654E-4 27 4.687105257854065E-5 0.0 0.0 0.006351027624392258 4.6871052578540654E-4 28 4.687105257854065E-5 0.0 0.0 0.01633456182362142 4.6871052578540654E-4 29 4.687105257854065E-5 0.0 0.0 0.03848113416698187 5.624526309424878E-4 30 4.687105257854065E-5 0.0 0.0 0.07513429728340067 5.624526309424878E-4 31 4.687105257854065E-5 0.0 0.0 0.16374402218313178 6.093236835210285E-4 32 4.687105257854065E-5 0.0 0.0 0.2618920062825959 6.561947360995691E-4 33 4.687105257854065E-5 0.0 0.0 0.35999311932948147 6.561947360995691E-4 34 4.687105257854065E-5 0.0 0.0 0.468405863943646 6.561947360995691E-4 35 7.030657886781097E-5 0.0 0.0 0.5890050822282311 6.561947360995691E-4 36 7.030657886781097E-5 0.0 0.0 0.7553738833557612 6.561947360995691E-4 37 7.030657886781097E-5 0.0 0.0 0.9997829870265613 6.561947360995691E-4 38 7.030657886781097E-5 0.0 0.0 1.3144283629863047 6.796302623888395E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTAGGA 2770 0.0 20.729605 2 TAGGACG 1970 0.0 19.543032 4 CTGTAGG 2890 0.0 18.806845 1 GTAGGAC 2945 0.0 18.302313 3 GTATCAA 8540 0.0 17.93363 1 AGGACGT 2130 0.0 17.765154 5 TAGGACC 2820 0.0 17.319046 4 ATACCGT 995 0.0 17.24613 6 GTCCTAC 2550 0.0 17.17235 1 GATATAC 1205 0.0 17.165546 1 TCCTACA 2700 0.0 16.948446 2 ATACGAA 1120 0.0 16.892757 40 TTAGGAC 1605 0.0 16.859911 3 TACCGTC 1005 0.0 16.855621 7 ACCGTCG 980 0.0 16.836637 8 CGCAATA 1120 0.0 16.696331 36 CGTCGTA 975 0.0 16.246058 10 GGACGTG 2360 0.0 16.220243 6 TCTAGCG 1175 0.0 16.102034 28 CCGTCGT 1040 0.0 16.076828 9 >>END_MODULE