##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062522_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 384635 Sequences flagged as poor quality 0 Sequence length 50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.7040752921601 32.0 32.0 32.0 32.0 32.0 2 31.384777776333408 32.0 32.0 32.0 32.0 32.0 3 31.504514669751842 32.0 32.0 32.0 32.0 32.0 4 31.632032966318718 32.0 32.0 32.0 32.0 32.0 5 31.563562858294226 32.0 32.0 32.0 32.0 32.0 6 35.12719331314103 36.0 36.0 36.0 36.0 36.0 7 35.139649277886825 36.0 36.0 36.0 36.0 36.0 8 35.10730172761189 36.0 36.0 36.0 36.0 36.0 9 35.12631715782495 36.0 36.0 36.0 36.0 36.0 10 35.08475567746045 36.0 36.0 36.0 36.0 36.0 11 35.16198993851314 36.0 36.0 36.0 36.0 36.0 12 35.08211161230777 36.0 36.0 36.0 36.0 36.0 13 35.07553914750348 36.0 36.0 36.0 36.0 36.0 14 35.03323670492805 36.0 36.0 36.0 36.0 36.0 15 35.05321668594902 36.0 36.0 36.0 36.0 36.0 16 35.04976146216543 36.0 36.0 36.0 36.0 36.0 17 35.06851430577041 36.0 36.0 36.0 36.0 36.0 18 35.04018615050632 36.0 36.0 36.0 36.0 36.0 19 34.958383922419955 36.0 36.0 36.0 36.0 36.0 20 34.862248625320106 36.0 36.0 36.0 32.0 36.0 21 34.7851989548533 36.0 36.0 36.0 32.0 36.0 22 34.8054597215542 36.0 36.0 36.0 32.0 36.0 23 34.791155251082195 36.0 36.0 36.0 32.0 36.0 24 34.804479571541854 36.0 36.0 36.0 32.0 36.0 25 34.77087628530945 36.0 36.0 36.0 32.0 36.0 26 34.72449725064022 36.0 36.0 36.0 32.0 36.0 27 34.69828278757783 36.0 36.0 36.0 32.0 36.0 28 34.62239785770926 36.0 36.0 36.0 32.0 36.0 29 34.579734033564286 36.0 36.0 36.0 32.0 36.0 30 34.516065880640085 36.0 36.0 36.0 32.0 36.0 31 34.47090098404981 36.0 36.0 36.0 32.0 36.0 32 34.386431292004104 36.0 36.0 36.0 32.0 36.0 33 34.280101914802344 36.0 36.0 36.0 32.0 36.0 34 34.163328870227616 36.0 36.0 36.0 32.0 36.0 35 34.03049644468132 36.0 36.0 36.0 32.0 36.0 36 33.94857202282684 36.0 36.0 36.0 32.0 36.0 37 33.83353308981242 36.0 36.0 36.0 32.0 36.0 38 33.7439468587102 36.0 36.0 36.0 27.0 36.0 39 33.48481807427821 36.0 36.0 36.0 21.0 36.0 40 33.40183030665436 36.0 36.0 36.0 21.0 36.0 41 33.345018004081794 36.0 36.0 36.0 14.0 36.0 42 33.13642024256763 36.0 36.0 36.0 14.0 36.0 43 33.124026674639595 36.0 36.0 36.0 14.0 36.0 44 33.00085795624423 36.0 36.0 36.0 14.0 36.0 45 32.72679033369298 36.0 36.0 36.0 14.0 36.0 46 32.640643727169916 36.0 36.0 36.0 14.0 36.0 47 32.437399092646274 36.0 36.0 36.0 14.0 36.0 48 32.325654191636225 36.0 36.0 36.0 14.0 36.0 49 32.23433644884111 36.0 36.0 36.0 14.0 36.0 50 31.685046862610008 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 6.0 21 21.0 22 74.0 23 187.0 24 520.0 25 1286.0 26 2807.0 27 5577.0 28 9017.0 29 12356.0 30 15778.0 31 19994.0 32 27552.0 33 35177.0 34 59436.0 35 194846.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.70542043049336 20.09740445470667 13.127499466953733 22.069675647846232 2 11.645381367389811 23.002943195290886 43.573590282255545 21.77808515506375 3 19.598942368439527 30.507262767365255 29.20056261423227 20.69323224996295 4 10.478245609473918 17.990302494572777 37.9627439000611 33.56870799589221 5 9.856357325776385 41.9158422920431 34.633873672442704 13.593926709737802 6 28.09468717095428 37.64270022228866 20.07357624761137 14.189036359145685 7 24.843033005316727 34.308370273116076 22.85439442588428 17.99420229568292 8 26.48432929920574 35.6979994020305 21.463985336747825 16.353685962015938 9 28.10586660080336 14.783886021812886 21.507663109181433 35.60258426820232 10 16.351086094609173 28.52652514721749 33.754598515475706 21.367790242697623 11 31.994488281097667 23.064203725609993 26.08836949315585 18.852938500136492 12 25.224433553888755 26.310398169693343 32.16113978187112 16.30402849454678 13 31.050736412442966 22.93135050112444 27.889037659079385 18.128875427353204 14 22.170889284646485 23.67465259271777 28.777152365229377 25.377305757406372 15 22.322461554460723 32.17907886697778 28.785731927671687 16.712727650889807 16 19.51382479493546 28.006811652605716 32.93954008345574 19.539823469003082 17 17.58706305978395 29.22172969178572 32.44582526291159 20.745381985518737 18 19.08458668607901 24.879171162270726 38.77650239837768 17.259739753272584 19 21.676134517139626 27.7171864234924 31.453455873750443 19.15322318561753 20 22.26604443173398 25.75090670375811 35.279940723023124 16.703108141484783 21 21.64415614803645 26.012193378137717 29.29244608524965 23.05120438857618 22 21.11378319705695 30.089565432162964 30.22397857709257 18.572672793687524 23 18.622590247897357 29.546453130890328 32.07300427678189 19.757952344430436 24 20.505674210615258 29.283346549325984 32.43932559439469 17.77165364566407 25 20.94505180235808 28.617260519713493 32.00384780376201 18.43383987416642 26 15.864650902803955 29.445058302026595 34.83666333017016 19.853627464999285 27 19.167522456354728 30.811028637539483 33.17638800421179 16.845060901894005 28 17.724856032342352 28.88634679631339 32.28073368258219 21.108063488762074 29 18.184512589857917 28.88686676979474 32.84880471095974 20.0798159293876 30 19.251498173593145 27.929855577365554 33.48993201346731 19.328714235573983 31 18.80406099288936 27.947014702250183 32.520181470744994 20.72874283411546 32 17.060329923173917 31.13653203686612 32.78328805230933 19.01984998765063 33 16.952955399274636 30.769690745771967 34.039283996516176 18.23806985843722 34 17.107907496717665 31.21244816514358 35.046472629895874 16.63317170824288 35 18.860218128875427 31.287324346458327 32.18973832334551 17.66271920132073 36 17.359574661692253 30.895784314999936 33.55700859256178 18.18763243074603 37 18.69486656180535 30.912423466403215 30.63657753454574 19.7561324372457 38 18.653788656778506 32.83788526785134 29.526954125339604 18.98137195003055 39 18.97565224173567 30.234638033460293 31.473994826263862 19.315714898540172 40 21.17514006785654 30.159501865404863 31.006538666528005 17.65881940021059 41 19.188061408868148 29.1060355921848 32.974378306706356 18.731524692240693 42 19.480286505388225 32.60155732057665 31.421217517906584 16.49693865612854 43 17.137285998414082 32.10706253981047 30.85314648952903 19.902504972246415 44 16.948535624683142 31.649225889479638 32.41228697336436 18.989951512472864 45 17.82755079490946 31.954450323033523 30.64203725609994 19.575961625957074 46 18.356103838704225 29.45571775839432 31.154211135232103 21.033967267669347 47 21.324112470264016 29.365242372638996 30.168861388069207 19.14178376902778 48 17.33357598762463 33.7678578392502 27.65582955269281 21.24273662043236 49 18.623370208119386 30.040947911656506 31.374159917844192 19.96152196237992 50 16.478999571021877 35.371456055741156 26.816072380308604 21.33347199292836 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 88.0 1 83.0 2 78.0 3 235.5 4 393.0 5 441.0 6 489.0 7 418.0 8 347.0 9 489.0 10 631.0 11 932.5 12 1234.0 13 2072.0 14 2910.0 15 4217.5 16 5525.0 17 6502.0 18 7479.0 19 8130.0 20 8781.0 21 9206.5 22 9632.0 23 9587.5 24 9543.0 25 8943.5 26 8344.0 27 9626.5 28 10909.0 29 12520.0 30 14131.0 31 16321.0 32 18511.0 33 22453.0 34 26395.0 35 29549.5 36 32704.0 37 32867.5 38 33031.0 39 29250.0 40 25469.0 41 23658.0 42 21847.0 43 20645.0 44 19443.0 45 21176.5 46 22910.0 47 24172.5 48 25435.0 49 21519.0 50 17603.0 51 14286.5 52 10970.0 53 9392.0 54 7814.0 55 7335.5 56 6857.0 57 6832.0 58 6807.0 59 6293.5 60 5780.0 61 5421.5 62 5063.0 63 4718.0 64 4373.0 65 3965.0 66 3557.0 67 3280.5 68 3004.0 69 2657.5 70 2311.0 71 1980.5 72 1650.0 73 1385.0 74 1120.0 75 897.5 76 675.0 77 543.0 78 411.0 79 305.0 80 199.0 81 152.5 82 106.0 83 67.5 84 29.0 85 24.5 86 20.0 87 18.0 88 16.0 89 11.0 90 6.0 91 3.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 1.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013779297255839951 2 0.004939748072848285 3 5.19973481352451E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 384635.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.90119677967859 #Duplication Level Percentage of deduplicated Percentage of total 1 77.46222041745747 37.879952836249245 2 12.508415726445241 12.233529976818499 3 4.262576125096896 6.2533522164516935 4 1.818982125789779 3.558016114878562 5 1.0087651878431396 2.4664912477603407 6 0.5831686598789597 1.7110587235489478 7 0.3840140855541427 1.3145123854696021 8 0.2685552839164558 1.0506139828016847 9 0.210245130882297 0.9253114665520037 >10 1.2158239176115095 11.602888323973115 >50 0.1495671195891018 5.13312975163199 >100 0.11591451768155364 10.666962828234881 >500 0.009615029116442238 3.312463405447314 >1k 0.002136673136987164 1.8917167401821189 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2289 0.5951096494078801 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1967 0.5113939189101355 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1847 0.4801955100289885 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1139 0.2961248976302208 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 993 0.25816683349149194 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 912 0.23710790749671765 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAA 903 0.23476802683063164 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 877 0.2280083715730498 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 866 0.22514851742561132 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 757 0.1968099626919027 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 756 0.1965499759512265 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 659 0.17133126210563263 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 658 0.1710712753649564 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 643 0.16717147425481302 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 637 0.16561155381075565 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 633 0.16457160684805075 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 630 0.16379164662602205 No Hit GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA 614 0.15963185877520245 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 555 0.14429264107530515 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 535 0.13909290626178064 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 534 0.1388329195211044 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 519 0.13493311841096103 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 462 0.12011387419241619 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 447 0.1162140730822728 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACCTGTCTCTTATA 434 0.11283424545348186 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 431 0.1120542852314532 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 423 0.10997439130604339 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT 410 0.10659456367725247 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT 406 0.10555461671454755 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 404 0.1050346432331951 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGACTGTCTCTTATA 403 0.1047746564925189 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.599867406762255E-4 0.0 10 0.0 0.0 0.0 2.599867406762255E-4 0.0 11 0.0 0.0 0.0 2.599867406762255E-4 0.0 12 0.0 0.0 0.0 5.19973481352451E-4 0.0 13 0.0 0.0 0.0 5.19973481352451E-4 0.0 14 0.0 0.0 0.0 5.19973481352451E-4 0.0 15 0.0 0.0 0.0 0.0012999337033811275 0.0 16 0.0 0.0 0.0 0.0023398806660860296 0.0 17 0.0 0.0 0.0 0.002599867406762255 0.0 18 0.0 0.0 0.0 0.0028598541474384805 0.0 19 0.0 0.0 0.0 0.003379827628790932 0.0 20 0.0 0.0 0.0 0.004159787850819608 0.0 21 0.0 0.0 0.0 0.008839549182991667 0.0 22 0.0 0.0 0.0 0.012999337033811276 0.0 23 0.0 0.0 0.0 0.027558594511679906 0.0 24 0.0 0.0 0.0 0.04029794480481495 0.0 25 0.0 0.0 0.0 0.05303729509795001 0.0 26 0.0 0.0 0.0 0.06863649953852353 0.0 27 0.0 0.0 0.0 0.08709555812653555 0.0 28 0.0 0.0 0.0 0.1182939670076826 0.0 29 0.0 0.0 0.0 0.17055130188360393 0.0 30 0.0 0.0 0.0 0.2589467937135206 0.0 31 0.0 0.0 0.0 0.4105190635277601 0.0 32 0.0 0.0 0.0 0.6161685754026545 0.0 33 0.0 0.0 0.0 0.7685208054389226 0.0 34 0.0 0.0 0.0 0.9583111261325672 0.0 35 0.0 0.0 0.0 1.1733201606718058 0.0 36 0.0 0.0 0.0 1.4509859997140147 0.0 37 0.0 0.0 0.0 1.8570852886502789 0.0 38 0.0 0.0 0.0 2.2683843124000678 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACAGC 25 0.002350839 35.199898 6 GTTGCTA 25 0.002350839 35.199898 44 GAAGCGG 40 1.8169007E-5 32.9999 9 TCGTATA 40 1.8169007E-5 32.9999 44 ATACATG 75 6.184564E-11 32.270767 1 TAGGACC 375 0.0 32.266575 4 GAGTTAT 35 3.2138705E-4 31.428478 13 AGGTGCG 30 0.00574029 29.333246 7 CCATTAG 30 0.00574029 29.333246 18 GGAAGCG 55 4.9496284E-6 27.999916 8 TATGCGT 60 9.7306565E-6 25.66659 39 GTCCTAT 70 1.1276643E-6 25.146051 1 AGGACCT 710 0.0 24.788658 5 GATAATA 45 0.0013954495 24.44755 1 GAGTGTG 65 1.8092656E-5 23.692238 7 GCGTTTA 65 1.8092656E-5 23.692238 42 ATGCGTT 65 1.8092656E-5 23.692238 40 TATATGG 75 2.0582338E-6 23.466599 14 GGACCTG 770 0.0 23.428501 6 TGTAGGA 1170 0.0 23.128136 2 >>END_MODULE