##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062521_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1433065 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.178956990785483 32.0 32.0 32.0 32.0 32.0 2 30.739106739750117 32.0 32.0 32.0 32.0 32.0 3 30.71955703335159 32.0 32.0 32.0 32.0 32.0 4 30.821590786182064 32.0 32.0 32.0 32.0 32.0 5 30.532057513092568 32.0 32.0 32.0 32.0 32.0 6 34.232461891121474 36.0 36.0 36.0 32.0 36.0 7 34.11004246143755 36.0 36.0 36.0 32.0 36.0 8 34.08787807950093 36.0 36.0 36.0 32.0 36.0 9 34.317206128123985 36.0 36.0 36.0 32.0 36.0 10 33.881793917233345 36.0 36.0 36.0 32.0 36.0 11 34.295096174981595 36.0 36.0 36.0 32.0 36.0 12 34.01213622550268 36.0 36.0 36.0 32.0 36.0 13 34.16700428801206 36.0 36.0 36.0 32.0 36.0 14 34.04190807814021 36.0 36.0 36.0 32.0 36.0 15 33.962437153932306 36.0 36.0 36.0 32.0 36.0 16 33.961085505542314 36.0 36.0 36.0 32.0 36.0 17 33.873167651153295 36.0 36.0 36.0 32.0 36.0 18 33.890534623342276 36.0 36.0 36.0 32.0 36.0 19 33.88511826051156 36.0 36.0 36.0 32.0 36.0 20 33.88550414670654 36.0 36.0 36.0 32.0 36.0 21 33.865939786401874 36.0 36.0 36.0 32.0 36.0 22 33.808564859235275 36.0 36.0 36.0 32.0 36.0 23 33.74758437335362 36.0 36.0 36.0 32.0 36.0 24 33.72312909742405 36.0 36.0 36.0 27.0 36.0 25 33.22191526553227 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 8.0 4 53.0 5 130.0 6 249.0 7 54.0 8 220.0 9 268.0 10 168.0 11 55.0 12 111.0 13 85.0 14 206.0 15 248.0 16 439.0 17 596.0 18 829.0 19 1104.0 20 1781.0 21 2807.0 22 4288.0 23 6506.0 24 9283.0 25 13134.0 26 18526.0 27 24190.0 28 32612.0 29 43210.0 30 56701.0 31 76533.0 32 109685.0 33 154924.0 34 325967.0 35 548095.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.00818461727423 17.08057325818671 10.957603012564448 25.953639111974606 2 17.227189241092862 19.45585788774382 36.18088663845561 27.1360662327077 3 19.555306503129476 22.97780789358173 27.98043527261587 29.486450330672927 4 12.978691627397994 14.720796949326665 34.994528440940655 37.305982982334676 5 14.967034424507261 36.03540527239792 33.47969187919487 15.517868423899955 6 35.5535139459698 34.16621230769445 16.381357156869385 13.898916589466365 7 30.933577449682424 29.952433622139175 20.43978649595281 18.67420243222559 8 28.812441856891823 32.33622849927225 19.288845183585554 19.562484460250367 9 27.01619493714386 14.527667456879389 18.325857278362097 40.130280327614656 10 15.905267452681235 26.42291645125322 31.497405257671744 26.174410838393804 11 37.89636947325399 21.00738122102792 21.316044112664052 19.780205193054037 12 24.51646803658073 23.46967723542696 28.31422031169644 23.699634416295865 13 29.60075903502502 19.002075748397775 25.106145430943112 26.29101978563409 14 23.574021219288102 19.212224322181036 24.65392018836747 32.55983427016339 15 25.60127986139492 26.468609513030906 22.203429497591525 25.726681127982648 16 26.555611056192646 25.49903417247968 23.14625737469567 24.799097396632003 17 24.46325753367806 25.63990238060803 25.07152723484618 24.82531285086772 18 25.568675293132852 24.354709445442456 25.84648858946168 24.230126671963006 19 25.48811079356872 25.56175888982832 24.843864638432567 24.106265678170395 20 25.388861679614166 24.191063604726633 25.15501717677652 25.265057538882672 21 26.390042769471776 24.41989405804099 24.05026408629078 25.13979908619645 22 25.359645861346948 24.530070195939203 24.628752659254765 25.481531283459084 23 24.355688113913224 24.14478428829393 25.169673455468406 26.329854142324443 24 24.533703593969243 25.35288428749518 24.720417814996395 25.392994303539183 25 25.233574331873648 24.433786192579426 24.510438961127893 25.822200514419038 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 111.0 1 111.0 2 343.5 3 576.0 4 576.0 5 576.0 6 1530.5 7 2485.0 8 2485.0 9 2485.0 10 2795.0 11 3105.0 12 3105.0 13 3105.0 14 3462.5 15 3820.0 16 3820.0 17 3820.0 18 6256.0 19 8692.0 20 8692.0 21 8692.0 22 13586.5 23 18481.0 24 18481.0 25 18481.0 26 27408.5 27 36336.0 28 36336.0 29 36336.0 30 44821.0 31 53306.0 32 53306.0 33 53306.0 34 67551.5 35 81797.0 36 81797.0 37 81797.0 38 94790.5 39 107784.0 40 107784.0 41 107784.0 42 125393.5 43 143003.0 44 143003.0 45 143003.0 46 171105.5 47 199208.0 48 199208.0 49 199208.0 50 197165.0 51 195122.0 52 195122.0 53 195122.0 54 182879.0 55 170636.0 56 170636.0 57 170636.0 58 157665.0 59 144694.0 60 144694.0 61 144694.0 62 127513.5 63 110333.0 64 110333.0 65 110333.0 66 91425.5 67 72518.0 68 72518.0 69 72518.0 70 55094.0 71 37670.0 72 37670.0 73 37670.0 74 29217.0 75 20764.0 76 20764.0 77 20764.0 78 16895.0 79 13026.0 80 13026.0 81 13026.0 82 9165.5 83 5305.0 84 5305.0 85 5305.0 86 3916.5 87 2528.0 88 2528.0 89 2528.0 90 1737.0 91 946.0 92 946.0 93 946.0 94 550.5 95 155.0 96 155.0 97 155.0 98 409.5 99 664.0 100 664.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009280807220886702 2 0.0039774888089514435 3 0.0054428794227756585 4 0.014025881589460353 5 0.035588057764302385 6 0.04493864549060929 7 0.06705906570881294 8 0.08743497329151155 9 0.09650643899613766 10 0.1192548837631231 11 0.12072027437694732 12 0.13460659495556726 13 0.12379061661543615 14 0.12700051986476538 15 0.11583563899753326 16 0.11513783394333126 17 0.12504666571299974 18 0.13174559423333904 19 0.13502527798808847 20 0.12365105560459574 21 0.13286208232006225 22 0.15442425849490427 23 0.14521323177943776 24 0.1396307913458217 25 0.13509505849350867 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1433065.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.53052579271749 #Duplication Level Percentage of deduplicated Percentage of total 1 81.07929957097943 45.0237613608174 2 11.639990180910676 12.927495499360772 3 3.181223605143847 5.299650583735263 4 1.3391595843412787 2.974569433553128 5 0.7109372884007866 1.9739360715272256 6 0.4278246883647309 1.425439793519941 7 0.2968177338349288 1.1537711377119526 8 0.20559596047625323 0.9133481428884084 9 0.15374884539950182 0.7683978802551813 >10 0.7891466283913166 8.014908710342988 >50 0.08035246558679206 3.1322009613041906 >100 0.08320854593219026 9.86324491463936 >500 0.009049831298621379 3.3650763357569295 >1k 0.0036450709397224997 3.1641991745873357 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 4761 0.33222498630557584 No Hit TCCATGTACTCTGCGTTGATACCAC 4083 0.2849138036306797 No Hit GAGTACATGGAAGCAGTGGTATCAA 2213 0.15442425849490427 No Hit GTATCAACGCAGAGTACTTTTTTTT 2138 0.14919072058838923 No Hit CATGTACTCTGCGTTGATACCACTG 1895 0.13223405777128044 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1703 0.1188362007306019 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1537 0.10725263683084856 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1521 0.10613614874412536 No Hit GAATAACGCCGCCGCATCGCCAGTC 1521 0.10613614874412536 No Hit TATCAACGCAGAGTACTTTTTTTTT 1511 0.10543834368992334 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.978050542020075E-5 2 0.0 0.0 0.0 0.0 6.978050542020075E-5 3 0.0 0.0 0.0 0.0 6.978050542020075E-5 4 0.0 0.0 0.0 6.978050542020075E-5 6.978050542020075E-5 5 0.0 0.0 0.0 6.978050542020075E-5 6.978050542020075E-5 6 0.0 0.0 0.0 6.978050542020075E-5 6.978050542020075E-5 7 0.0 0.0 0.0 6.978050542020075E-5 6.978050542020075E-5 8 0.0 0.0 0.0 6.978050542020075E-5 6.978050542020075E-5 9 0.0 0.0 0.0 6.978050542020075E-5 6.978050542020075E-5 10 0.0 0.0 0.0 6.978050542020075E-5 6.978050542020075E-5 11 0.0 0.0 0.0 1.395610108404015E-4 6.978050542020075E-5 12 0.0 0.0 0.0 1.395610108404015E-4 2.79122021680803E-4 13 0.0 0.0 0.0 2.093415162606023E-4 2.79122021680803E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATT 75 5.8778824E-8 15.192876 2 CGTCTTA 100 6.5847416E-10 14.25228 15 GCGTTAT 85 2.7174065E-7 13.404076 1 TCGCGTA 130 1.4551915E-11 13.155031 9 TACCGTG 65 5.447294E-5 13.155031 7 CGCATCG 255 0.0 13.039935 13 GCATCGC 280 0.0 12.21496 14 CAAGACG 335 0.0 12.191721 4 GCGCAAG 355 0.0 12.035349 1 GTCCTAG 160 3.6379788E-12 11.868192 1 CGCGTAA 145 9.640644E-11 11.794167 10 TAGGACA 105 2.7257738E-7 11.759678 4 GTACCGT 65 8.0166804E-4 11.69336 6 TAAGGCC 65 8.035499E-4 11.690094 4 TCGAACG 65 8.0496375E-4 11.687644 3 CGCAAGA 350 0.0 11.665959 2 ATACGCT 180 0.0 11.612157 8 CGCCAGT 295 0.0 11.595885 18 AAGACGG 365 0.0 11.451486 5 CGAGCCG 335 0.0 11.345098 15 >>END_MODULE