##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062521_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1433065 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266536409723216 32.0 32.0 32.0 32.0 32.0 2 31.388489007825882 32.0 32.0 32.0 32.0 32.0 3 31.490850031226778 32.0 32.0 32.0 32.0 32.0 4 31.599780191407927 32.0 32.0 32.0 32.0 32.0 5 31.534510297858088 32.0 32.0 32.0 32.0 32.0 6 35.13334566122263 36.0 36.0 36.0 36.0 36.0 7 35.14444843744003 36.0 36.0 36.0 36.0 36.0 8 35.0830074002226 36.0 36.0 36.0 36.0 36.0 9 35.22691015411024 36.0 36.0 36.0 36.0 36.0 10 35.08324186272081 36.0 36.0 36.0 36.0 36.0 11 35.22508190486824 36.0 36.0 36.0 36.0 36.0 12 35.132948610146784 36.0 36.0 36.0 36.0 36.0 13 35.180825014915584 36.0 36.0 36.0 36.0 36.0 14 35.143160289309975 36.0 36.0 36.0 36.0 36.0 15 35.09227983378283 36.0 36.0 36.0 36.0 36.0 16 35.1081248931486 36.0 36.0 36.0 36.0 36.0 17 35.08411621245373 36.0 36.0 36.0 36.0 36.0 18 35.08962677896676 36.0 36.0 36.0 36.0 36.0 19 35.07754568006336 36.0 36.0 36.0 36.0 36.0 20 35.07659666518965 36.0 36.0 36.0 36.0 36.0 21 35.06508288179531 36.0 36.0 36.0 36.0 36.0 22 35.04499586550505 36.0 36.0 36.0 36.0 36.0 23 34.99917030979056 36.0 36.0 36.0 36.0 36.0 24 34.97538143768775 36.0 36.0 36.0 36.0 36.0 25 34.9472571027832 36.0 36.0 36.0 32.0 36.0 26 34.897620833667695 36.0 36.0 36.0 32.0 36.0 27 34.87415783652521 36.0 36.0 36.0 32.0 36.0 28 34.859666518964595 36.0 36.0 36.0 32.0 36.0 29 34.828942860233134 36.0 36.0 36.0 32.0 36.0 30 34.81922732046348 36.0 36.0 36.0 32.0 36.0 31 34.81688758011674 36.0 36.0 36.0 32.0 36.0 32 34.77322103323994 36.0 36.0 36.0 32.0 36.0 33 34.75000645469675 36.0 36.0 36.0 32.0 36.0 34 34.735051096775095 36.0 36.0 36.0 32.0 36.0 35 34.695853293465404 36.0 36.0 36.0 32.0 36.0 36 34.67868798693709 36.0 36.0 36.0 32.0 36.0 37 34.658725877751536 36.0 36.0 36.0 32.0 36.0 38 34.61565874541629 36.0 36.0 36.0 32.0 36.0 39 34.587333442656124 36.0 36.0 36.0 32.0 36.0 40 34.55891254060353 36.0 36.0 36.0 32.0 36.0 41 34.54179817384417 36.0 36.0 36.0 32.0 36.0 42 34.482218880511354 36.0 36.0 36.0 32.0 36.0 43 34.49035040280797 36.0 36.0 36.0 32.0 36.0 44 34.46544922944877 36.0 36.0 36.0 32.0 36.0 45 34.39599599459899 36.0 36.0 36.0 32.0 36.0 46 34.43647496798819 36.0 36.0 36.0 32.0 36.0 47 34.40137607156689 36.0 36.0 36.0 32.0 36.0 48 34.37286794388252 36.0 36.0 36.0 32.0 36.0 49 34.38176286490843 36.0 36.0 36.0 32.0 36.0 50 33.846570811512386 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 10.0 21 40.0 22 116.0 23 334.0 24 980.0 25 2266.0 26 4809.0 27 9146.0 28 15347.0 29 22867.0 30 32641.0 31 46933.0 32 69814.0 33 110458.0 34 247576.0 35 869727.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.40655561968585 17.652547690018544 11.487060376997684 26.45383631329793 2 16.57965824216697 19.983768352194655 35.9300015422159 27.50657186342248 3 18.919122603551287 23.217064487271273 28.339676412259657 29.52413649691778 4 12.700575900118697 15.271436456647693 35.17582294124256 36.85216470199105 5 14.679515583731373 36.26765010658972 33.36980527749962 15.68302903217928 6 35.697294113788594 34.42477326505989 16.100361394246303 13.777571226905206 7 30.899575385624516 30.025574555236506 20.37869880291543 18.696151256223548 8 28.744683597743297 32.63348138430567 19.126208511128244 19.495626506822788 9 27.079860299428148 14.340521888400037 18.303147449696976 40.27647036247484 10 15.833894484897753 26.54862131166416 31.47770687303088 26.139777330407206 11 38.19254534860596 20.91810210981358 21.192827959652913 19.696524581927548 12 24.41515213894694 23.505493470289203 28.293761971717963 23.78559241904589 13 29.779040029586934 18.8797437659841 25.128797367879336 26.212418836549634 14 23.54436121180826 19.192639552288277 24.53594219382931 32.72705704207415 15 25.595559168635056 26.571509317441986 22.22864978211037 25.604281731812584 16 26.533409161482556 25.4285046386591 23.223998911424115 24.81408728843423 17 24.575089057370043 25.726955860341295 24.939761978696012 24.75819310359265 18 25.743772962147567 24.22576784723652 25.81466995565449 24.21578923496143 19 25.544200716645793 25.506519243718884 24.854141298545425 24.0951387410899 20 25.51600939245603 24.082089786576326 25.235421980161405 25.166478840806246 21 26.487633149926904 24.51089099238346 23.979582224114047 25.021893633575587 22 25.505123633610477 24.45534571006898 24.596023208996105 25.443507447324443 23 24.368329419809985 24.013355988737427 25.208068022036684 26.4102465694159 24 24.71018411586355 25.22725766102724 24.69183184293804 25.37072638017117 25 25.340302079807962 24.191226497053517 24.62735465592977 25.841116767208742 26 24.71667370286763 24.849535785187694 25.198508092794114 25.23528241915056 27 25.806086953487807 24.669990544741516 24.40028889129244 25.12363361047824 28 24.90061511515528 24.05675946310879 25.296340361393238 25.746285060342693 29 24.596721014050303 24.944716394580844 25.531570445164736 24.926992146204118 30 25.149382616978293 24.646265172898644 25.49995987620938 24.704392333913674 31 25.080858160655655 24.74081775774302 24.50802999166123 25.670294089940093 32 24.93955263717975 24.613956798889095 24.551642807548856 25.8948477563823 33 24.60453643065737 24.248446511498084 25.14435842058804 26.00265863725651 34 25.16201288845935 24.512775066029803 25.485933994619923 24.839278050890922 35 26.018568592492315 24.258704245794853 25.064320180871068 24.65840698084176 36 24.884216696381532 24.968581327434556 24.89056672237477 25.256635253809144 37 26.039153841591272 24.519543775055563 24.7276292422186 24.713673141134564 38 24.84981490720937 24.346348560602625 25.080020794590613 25.723815737597388 39 25.247354446588254 24.469371591658437 24.684714231385176 25.598559730368127 40 25.576648651666183 24.543408707909272 24.980095110828888 24.899847529595657 41 24.36204917432217 24.794618527421992 25.583417360691946 25.25991493756389 42 26.07830070513201 24.78610530576073 24.85679295775139 24.278801031355872 43 25.23779451734569 23.813295279697712 24.962370862452158 25.986539340504443 44 24.901940944758262 24.34481338948338 25.308482169336354 25.444763496422006 45 25.069832840799265 24.665873494921726 25.032849172926557 25.231444491352452 46 24.67288597919282 24.42307142114478 25.45170728711857 25.452335312543834 47 25.03489027705671 24.20457146366108 25.70066654385289 25.059871715429317 48 25.654105012682603 25.41091995129321 24.35507112378015 24.579903912244035 49 24.47955954544979 24.807946603957255 25.350490033599314 25.362003816993646 50 24.465411174937056 25.488184756577514 24.619905321744177 25.42649874674125 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 18.5 2 23.0 3 93.5 4 164.0 5 196.0 6 228.0 7 199.0 8 170.0 9 219.0 10 268.0 11 441.5 12 615.0 13 1042.0 14 1469.0 15 1977.0 16 2485.0 17 2828.0 18 3171.0 19 3426.5 20 3682.0 21 4478.5 22 5275.0 23 5692.5 24 6110.0 25 7378.0 26 8646.0 27 10681.0 28 12716.0 29 14475.5 30 16235.0 31 17660.5 32 19086.0 33 22040.5 34 24995.0 35 28930.5 36 32866.0 37 40342.5 38 47819.0 39 53046.5 40 58274.0 41 65063.5 42 71853.0 43 75049.5 44 78246.0 45 87785.0 46 97324.0 47 105437.5 48 113551.0 49 114706.0 50 115861.0 51 110433.0 52 105005.0 53 103348.5 54 101692.0 55 102786.5 56 103881.0 57 100641.0 58 97401.0 59 89365.5 60 81330.0 61 72158.0 62 62986.0 63 54745.5 64 46505.0 65 39773.0 66 33041.0 67 28772.5 68 24504.0 69 22593.0 70 20682.0 71 16119.0 72 11556.0 73 10477.5 74 9399.0 75 6867.0 76 4335.0 77 3915.0 78 3495.0 79 3044.5 80 2594.0 81 2019.5 82 1445.0 83 1230.5 84 1016.0 85 831.0 86 646.0 87 465.5 88 285.0 89 179.0 90 73.0 91 47.0 92 21.0 93 18.5 94 16.0 95 11.0 96 6.0 97 4.0 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015212150181603766 2 0.004326391336052447 3 4.884635379414052E-4 4 2.79122021680803E-4 5 0.0 6 2.79122021680803E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.395610108404015E-4 47 6.978050542020075E-5 48 0.0 49 0.0 50 6.978050542020075E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1433065.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.34652807105307 #Duplication Level Percentage of deduplicated Percentage of total 1 81.51828339060813 47.563088101541766 2 11.549886511846415 13.477915551618484 3 3.0374564092945358 5.316751069485112 4 1.2850961054534589 2.999235839633649 5 0.6818200611513483 1.989091666868713 6 0.41726323551435934 1.46075166503742 7 0.27218068599176115 1.1116558624931743 8 0.18914006346528467 0.8828532817870393 9 0.15028076395700946 0.7891524731481256 >10 0.7418490540149919 7.8502676850955355 >50 0.07305204971313513 2.9807065873042915 >100 0.0739517458302097 9.009192350374839 >500 0.00793623368541837 3.1232835917492006 >1k 0.0018036894739587202 1.4460542738626316 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1771 0.12358127509917555 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1732 0.1208598353877877 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1649 0.11506805343791104 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1577 0.1100438570476566 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1486 0.10369383105441833 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 6.978050542020075E-5 0.0 12 0.0 0.0 0.0 6.978050542020075E-5 2.79122021680803E-4 13 0.0 0.0 0.0 1.395610108404015E-4 3.489025271010038E-4 14 0.0 0.0 0.0 1.395610108404015E-4 3.489025271010038E-4 15 0.0 0.0 0.0 2.093415162606023E-4 3.489025271010038E-4 16 0.0 0.0 0.0 2.79122021680803E-4 3.489025271010038E-4 17 0.0 0.0 0.0 3.489025271010038E-4 3.489025271010038E-4 18 0.0 0.0 0.0 4.186830325212046E-4 3.489025271010038E-4 19 0.0 0.0 0.0 5.58244043361606E-4 3.489025271010038E-4 20 0.0 0.0 0.0 6.280245487818068E-4 4.186830325212046E-4 21 0.0 0.0 0.0 8.373660650424092E-4 4.186830325212046E-4 22 0.0 0.0 0.0 0.0013258296029838145 4.186830325212046E-4 23 0.0 0.0 0.0 0.002232976173446424 4.186830325212046E-4 24 0.0 0.0 0.0 0.0030703422384888335 4.186830325212046E-4 25 0.0 0.0 0.0 0.003768147292690841 4.186830325212046E-4 26 0.0 0.0 0.0 0.0048148548739938525 4.186830325212046E-4 27 0.0 0.0 0.0 0.007047831047440277 4.186830325212046E-4 28 0.0 0.0 0.0 0.012700051986476538 4.186830325212046E-4 29 0.0 0.0 0.0 0.02295778628324605 4.186830325212046E-4 30 0.0 0.0 0.0 0.038937522024472024 4.186830325212046E-4 31 0.0 0.0 0.0 0.07522338484297642 4.186830325212046E-4 32 0.0 0.0 0.0 0.11778949314929887 4.186830325212046E-4 33 0.0 0.0 0.0 0.15833196679843553 4.186830325212046E-4 34 0.0 0.0 0.0 0.20675963756005486 4.186830325212046E-4 35 0.0 0.0 0.0 0.2664219696943265 4.186830325212046E-4 36 0.0 0.0 0.0 0.35043769822024823 4.186830325212046E-4 37 0.0 0.0 0.0 0.47283270472728034 4.186830325212046E-4 38 0.0 0.0 0.0 0.6293503783847907 4.884635379414054E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACCGT 30 0.005745565 29.333124 6 TAGTACG 80 1.3098179E-7 24.750687 2 ATACCGA 65 4.9330137E-4 20.307549 6 CGCAATA 640 0.0 20.281105 36 GCCGGTC 650 0.0 19.969088 8 TAGCGGC 670 0.0 19.701351 30 CTAGCGG 670 0.0 19.701351 29 TCTAGCG 660 0.0 19.666527 28 CGCCGGT 665 0.0 19.518658 7 ATACGAA 645 0.0 19.441723 40 CGAATGC 660 0.0 19.333195 43 TACGAAT 670 0.0 19.04464 41 CGGTCCA 740 0.0 18.729595 10 CAATACG 695 0.0 18.676125 38 AATACGA 700 0.0 18.542725 39 GTATTAC 95 1.5937083E-5 18.531357 1 CTTGCGC 765 0.0 17.829939 3 GTATTAG 350 0.0 17.604788 1 CCGGTCC 800 0.0 17.599874 9 GCAATAC 750 0.0 17.599874 37 >>END_MODULE