##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062520_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1066665 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.285142945535853 32.0 32.0 32.0 32.0 32.0 2 31.410584391538112 32.0 32.0 32.0 32.0 32.0 3 31.504771413705335 32.0 32.0 32.0 32.0 32.0 4 31.60781407470949 32.0 32.0 32.0 32.0 32.0 5 31.545187101854847 32.0 32.0 32.0 32.0 32.0 6 35.1475617930653 36.0 36.0 36.0 36.0 36.0 7 35.167366511510174 36.0 36.0 36.0 36.0 36.0 8 35.097187964356195 36.0 36.0 36.0 36.0 36.0 9 35.23667411980331 36.0 36.0 36.0 36.0 36.0 10 35.1064364163069 36.0 36.0 36.0 36.0 36.0 11 35.245268195731555 36.0 36.0 36.0 36.0 36.0 12 35.145536789901236 36.0 36.0 36.0 36.0 36.0 13 35.19497780465282 36.0 36.0 36.0 36.0 36.0 14 35.15133148645545 36.0 36.0 36.0 36.0 36.0 15 35.119379561530565 36.0 36.0 36.0 36.0 36.0 16 35.130728954263994 36.0 36.0 36.0 36.0 36.0 17 35.102630160359624 36.0 36.0 36.0 36.0 36.0 18 35.116535182086224 36.0 36.0 36.0 36.0 36.0 19 35.100701719846434 36.0 36.0 36.0 36.0 36.0 20 35.094375459961654 36.0 36.0 36.0 36.0 36.0 21 35.08619482217941 36.0 36.0 36.0 36.0 36.0 22 35.06123572068081 36.0 36.0 36.0 36.0 36.0 23 35.028300356719306 36.0 36.0 36.0 36.0 36.0 24 34.99679749499609 36.0 36.0 36.0 36.0 36.0 25 34.97198558122747 36.0 36.0 36.0 36.0 36.0 26 34.92677551058674 36.0 36.0 36.0 32.0 36.0 27 34.90729704265163 36.0 36.0 36.0 32.0 36.0 28 34.89139514280491 36.0 36.0 36.0 32.0 36.0 29 34.86371259955094 36.0 36.0 36.0 32.0 36.0 30 34.849426014728145 36.0 36.0 36.0 32.0 36.0 31 34.84949257733215 36.0 36.0 36.0 32.0 36.0 32 34.809974078084494 36.0 36.0 36.0 32.0 36.0 33 34.793184364350566 36.0 36.0 36.0 32.0 36.0 34 34.7662030721923 36.0 36.0 36.0 32.0 36.0 35 34.732572082143875 36.0 36.0 36.0 32.0 36.0 36 34.71133954896805 36.0 36.0 36.0 32.0 36.0 37 34.695928899888905 36.0 36.0 36.0 32.0 36.0 38 34.65268758232435 36.0 36.0 36.0 32.0 36.0 39 34.62268472294488 36.0 36.0 36.0 32.0 36.0 40 34.5991759362124 36.0 36.0 36.0 32.0 36.0 41 34.57949590546235 36.0 36.0 36.0 32.0 36.0 42 34.52407175636212 36.0 36.0 36.0 32.0 36.0 43 34.52494644522882 36.0 36.0 36.0 32.0 36.0 44 34.49241326939573 36.0 36.0 36.0 32.0 36.0 45 34.43310973923397 36.0 36.0 36.0 32.0 36.0 46 34.44895913899865 36.0 36.0 36.0 32.0 36.0 47 34.410230953485865 36.0 36.0 36.0 32.0 36.0 48 34.37210276891058 36.0 36.0 36.0 32.0 36.0 49 34.368593700927654 36.0 36.0 36.0 32.0 36.0 50 33.854573835271616 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 7.0 21 17.0 22 74.0 23 246.0 24 614.0 25 1562.0 26 3288.0 27 6138.0 28 10602.0 29 16514.0 30 23618.0 31 34451.0 32 51448.0 33 83617.0 34 183822.0 35 650645.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.84218106397802 17.429046410384554 11.465560001012651 26.26321252462478 2 16.367389912312362 19.937147662678704 36.695020846087715 27.000441578921215 3 18.90868999862187 23.557018477251017 28.342972428967723 29.19131909515939 4 12.452222402431513 15.075736339849305 35.53837629762408 36.9336649600951 5 14.396553744615225 36.73355739618343 33.381614658772904 15.488274200428437 6 35.46337589918446 34.84199759811224 16.163429618219848 13.531196884483448 7 30.864545911364775 30.10985652464131 20.320082050205126 18.705515513788782 8 28.63223223786287 32.97352027112542 19.011217205026885 19.383030285984823 9 27.220073781365283 13.88655294773898 18.36049743827725 40.53287583261849 10 15.840493500771094 26.548728982389036 31.548799294998897 26.06197822184097 11 38.19746593354052 20.816938776466838 21.594127490824206 19.391467799168435 12 24.5096632963489 23.5713180801845 28.669638546310228 23.24938007715637 13 29.819671593236862 19.04618600966564 25.235664430725674 25.898477966371825 14 23.38644279131686 19.300061406345947 24.862726348009918 32.45076945432727 15 25.43272723863631 27.11029235983181 22.125222070659486 25.33175833087239 16 26.050634454116334 25.60607125948634 23.816380963095256 24.526913323302068 17 24.310444235069117 25.81935284273882 25.217758152747116 24.652444769444955 18 25.29003951568674 24.511538299278595 26.32429113170489 23.87413105332977 19 25.54597741558971 25.081726690197954 25.15710180797158 24.21519408624076 20 25.587883731068327 24.026100040781316 25.36719588624357 25.018820341906782 21 26.52444769444952 24.32103800162188 24.31756924620195 24.836945057726652 22 25.579539968031202 24.467756980870284 24.922163940881155 25.030539110217358 23 24.158100247031637 24.230850360703688 25.563508692982335 26.04754069928234 24 24.628257231651922 25.054632897863904 25.238195684680758 25.078914185803413 25 24.981132783019973 24.321131751768363 25.15682055753212 25.54091490767954 26 24.425663165098698 25.18794560616501 25.630165047132884 24.75622618160341 27 25.453352270862922 24.71281986378104 24.96641401002189 24.86741385533415 28 24.543507099229842 24.498038278184808 25.69935265523852 25.259101967346826 29 24.441225689415138 24.91138267403543 25.61394627179105 25.033445364758382 30 24.5206320634876 24.951695237023806 25.873915427992856 24.653757271495735 31 25.090914204553442 24.777319964562444 24.682351066173542 25.44941476471057 32 24.84482007003136 24.80244500382032 24.872851363830257 25.47988356231807 33 24.352163050254767 24.456881963878068 25.45935228023794 25.731602705629225 34 25.071976674963555 24.773382458410094 25.63513380489657 24.519507061729783 35 25.67535261773847 24.552788363731818 25.42447722574567 24.347381792784052 36 24.40072562613379 25.323883318567685 25.198070621985348 25.077320433313176 37 25.718946435853805 24.903038910998298 24.902195159679938 24.47581949346796 38 24.751069923546755 24.656101025157852 25.333070832923177 25.259758218372212 39 25.45053976646838 24.406538135215836 24.9115701743284 25.231351923987383 40 25.602508753919928 24.638100997032808 25.277289495764837 24.482100753282428 41 24.37138183028411 24.974664022912535 25.84522788316857 24.808726263634785 42 25.902040471938236 25.13600802501254 25.200976876526372 23.760974626522856 43 25.03503911724862 23.967693699521405 25.35050836016931 25.64675882306066 44 24.488944513975802 24.830663797912184 25.32538332091144 25.355008367200572 45 24.670819798155936 25.061195408117825 25.110226734729274 25.157758058996965 46 24.383100598594684 24.494569522764877 25.589008732826144 25.53332114581429 47 24.865070101672035 24.37869434170991 25.92960301500471 24.826632541613346 48 25.367570886829512 25.385570914954553 24.58597591558737 24.660882282628567 49 24.377569339952093 25.07441417877215 25.34797710621423 25.20003937506152 50 24.21622533785209 25.71857143526787 24.801788752794927 25.263414474085117 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 10.0 2 13.0 3 56.0 4 99.0 5 111.0 6 123.0 7 133.0 8 143.0 9 177.0 10 211.0 11 341.5 12 472.0 13 854.0 14 1236.0 15 1685.0 16 2134.0 17 2461.0 18 2788.0 19 2961.0 20 3134.0 21 3647.0 22 4160.0 23 4523.0 24 4886.0 25 5654.5 26 6423.0 27 8060.5 28 9698.0 29 11390.0 30 13082.0 31 15007.0 32 16932.0 33 19667.0 34 22402.0 35 25728.5 36 29055.0 37 34088.0 38 39121.0 39 42408.0 40 45695.0 41 49908.0 42 54121.0 43 55945.0 44 57769.0 45 64491.5 46 71214.0 47 76543.5 48 81873.0 49 83335.0 50 84797.0 51 80410.0 52 76023.0 53 74630.0 54 73237.0 55 73824.0 56 74411.0 57 72191.0 58 69971.0 59 64377.0 60 58783.0 61 51554.0 62 44325.0 63 38945.0 64 33565.0 65 28816.5 66 24068.0 67 21430.0 68 18792.0 69 17432.0 70 16072.0 71 12419.0 72 8766.0 73 7823.0 74 6880.0 75 5104.0 76 3328.0 77 2943.5 78 2559.0 79 2179.5 80 1800.0 81 1404.0 82 1008.0 83 861.5 84 715.0 85 597.0 86 479.0 87 350.0 88 221.0 89 138.0 90 55.0 91 32.5 92 10.0 93 8.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014812523144567413 2 0.0035625055664149476 3 1.8750029296920776E-4 4 3.750005859384155E-4 5 0.0 6 3.750005859384155E-4 7 9.375014648460388E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1066665.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.81039948486889 #Duplication Level Percentage of deduplicated Percentage of total 1 80.44544947768293 47.31029020522371 2 12.215743276927887 14.36825484241461 3 3.3022248716689546 5.826154916751634 4 1.3734981945326172 3.2310391004883754 5 0.7036087778696375 2.0689756653786877 6 0.42550185350826414 1.5014360391823907 7 0.29177547851380764 1.2011602715900067 8 0.18850729683771109 0.8868951546270842 9 0.14612433368353767 0.773426739455022 >10 0.7607465910713818 8.098052348539635 >50 0.06805792742110976 2.810065250899795 >100 0.07123791682117127 8.521504062594582 >500 0.006083236840793685 2.4504511895940437 >1k 0.001440766620187978 0.9522942132604792 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1353 0.12684394819366906 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1263 0.1184064350100547 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1175 0.11015642211940956 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1111 0.10415641274439491 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1107 0.10378141215845652 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.375014648460388E-5 2 0.0 0.0 0.0 0.0 9.375014648460388E-5 3 0.0 0.0 0.0 0.0 9.375014648460388E-5 4 0.0 0.0 0.0 0.0 9.375014648460388E-5 5 0.0 0.0 0.0 0.0 2.8125043945381164E-4 6 0.0 0.0 0.0 0.0 2.8125043945381164E-4 7 0.0 0.0 0.0 0.0 2.8125043945381164E-4 8 0.0 0.0 0.0 0.0 2.8125043945381164E-4 9 0.0 0.0 0.0 0.0 2.8125043945381164E-4 10 0.0 0.0 0.0 9.375014648460388E-5 2.8125043945381164E-4 11 0.0 0.0 0.0 9.375014648460388E-5 2.8125043945381164E-4 12 0.0 0.0 0.0 9.375014648460388E-5 2.8125043945381164E-4 13 0.0 0.0 0.0 9.375014648460388E-5 2.8125043945381164E-4 14 0.0 0.0 0.0 9.375014648460388E-5 2.8125043945381164E-4 15 0.0 0.0 0.0 9.375014648460388E-5 2.8125043945381164E-4 16 0.0 0.0 0.0 9.375014648460388E-5 2.8125043945381164E-4 17 0.0 0.0 0.0 1.8750029296920776E-4 2.8125043945381164E-4 18 0.0 0.0 0.0 3.750005859384155E-4 2.8125043945381164E-4 19 0.0 0.0 0.0 4.687507324230194E-4 2.8125043945381164E-4 20 0.0 0.0 0.0 9.375014648460388E-4 2.8125043945381164E-4 21 0.0 0.0 0.0 0.0010312516113306427 2.8125043945381164E-4 22 0.0 0.0 0.0 0.0012187519042998504 3.750005859384155E-4 23 0.0 0.0 0.0 0.002250003515630493 3.750005859384155E-4 24 0.0 0.0 0.0 0.003656255712899551 3.750005859384155E-4 25 0.0 0.0 0.0 0.004875007617199402 3.750005859384155E-4 26 0.0 0.0 0.0 0.006937510839860687 3.750005859384155E-4 27 0.0 0.0 0.0 0.009562514941429595 3.750005859384155E-4 28 0.0 0.0 0.0 0.014625022851598205 3.750005859384155E-4 29 0.0 0.0 0.0 0.021843784130912706 3.750005859384155E-4 30 0.0 0.0 0.0 0.039468811670018235 3.750005859384155E-4 31 0.0 0.0 0.0 0.07828137231464424 3.750005859384155E-4 32 0.0 0.0 0.0 0.1184064350100547 3.750005859384155E-4 33 0.0 0.0 0.0 0.16246900385781854 3.750005859384155E-4 34 0.0 0.0 0.0 0.21046907885793573 3.750005859384155E-4 35 0.0 0.0 0.0 0.2670941673346365 3.750005859384155E-4 36 0.0 0.0 0.0 0.3527818012215644 3.750005859384155E-4 37 0.0 0.0 0.0 0.4825320039562562 3.750005859384155E-4 38 0.0 0.0 0.0 0.6405947509292983 5.625008789076233E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGGG 85 2.3521898E-7 23.294044 2 GTATAGG 165 0.0 22.669783 1 CGCAATA 380 0.0 20.84204 36 ATTTCGT 160 1.8189894E-12 20.624935 42 TCTAGCG 395 0.0 20.050568 28 TAGCGGC 430 0.0 19.953424 30 GTCCTAC 320 0.0 19.94024 1 CTAGCGG 410 0.0 19.853596 29 CGGTCCA 420 0.0 19.380892 10 CGAGCCG 435 0.0 19.21833 15 GTAGGAC 340 0.0 18.764647 3 TAGGACG 225 0.0 18.577717 4 CGCCGGT 415 0.0 18.554157 7 TCCTACA 380 0.0 18.526257 2 CAATACG 430 0.0 18.418547 38 ACGCGCT 85 1.4306673E-4 18.11759 15 GCCGGTC 475 0.0 18.063099 8 TCTTGCG 440 0.0 17.999943 2 CGAATGC 430 0.0 17.90692 43 CTTACAC 160 1.1004886E-9 17.874945 3 >>END_MODULE