##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062519_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1831589 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.240880459535408 32.0 32.0 32.0 32.0 32.0 2 31.33425894127995 32.0 32.0 32.0 32.0 32.0 3 31.44671484705357 32.0 32.0 32.0 32.0 32.0 4 31.56007324787384 32.0 32.0 32.0 32.0 32.0 5 31.488039620242315 32.0 32.0 32.0 32.0 32.0 6 35.05665517755348 36.0 36.0 36.0 36.0 36.0 7 35.07523467328096 36.0 36.0 36.0 36.0 36.0 8 35.00667890012443 36.0 36.0 36.0 36.0 36.0 9 35.15421472830422 36.0 36.0 36.0 36.0 36.0 10 35.01420242204993 36.0 36.0 36.0 36.0 36.0 11 35.16468323406616 36.0 36.0 36.0 36.0 36.0 12 35.06026788761016 36.0 36.0 36.0 36.0 36.0 13 35.117357660479506 36.0 36.0 36.0 36.0 36.0 14 35.07748736206649 36.0 36.0 36.0 36.0 36.0 15 35.031614625333525 36.0 36.0 36.0 36.0 36.0 16 35.052165087254835 36.0 36.0 36.0 36.0 36.0 17 35.02721953451348 36.0 36.0 36.0 36.0 36.0 18 35.04551839959729 36.0 36.0 36.0 36.0 36.0 19 35.0210953439882 36.0 36.0 36.0 36.0 36.0 20 35.00381635836424 36.0 36.0 36.0 36.0 36.0 21 34.994663104004225 36.0 36.0 36.0 36.0 36.0 22 34.98741093116414 36.0 36.0 36.0 36.0 36.0 23 34.945712165775184 36.0 36.0 36.0 32.0 36.0 24 34.92808703262577 36.0 36.0 36.0 32.0 36.0 25 34.89891782490504 36.0 36.0 36.0 32.0 36.0 26 34.855087576961864 36.0 36.0 36.0 32.0 36.0 27 34.839690017793295 36.0 36.0 36.0 32.0 36.0 28 34.821127447260274 36.0 36.0 36.0 32.0 36.0 29 34.79639100256662 36.0 36.0 36.0 32.0 36.0 30 34.777700128140104 36.0 36.0 36.0 32.0 36.0 31 34.77946034836418 36.0 36.0 36.0 32.0 36.0 32 34.74345500000273 36.0 36.0 36.0 32.0 36.0 33 34.72446875363414 36.0 36.0 36.0 32.0 36.0 34 34.716273137696284 36.0 36.0 36.0 32.0 36.0 35 34.690542474321475 36.0 36.0 36.0 32.0 36.0 36 34.655822894765144 36.0 36.0 36.0 32.0 36.0 37 34.64104174025941 36.0 36.0 36.0 32.0 36.0 38 34.606295407976354 36.0 36.0 36.0 32.0 36.0 39 34.57517488912633 36.0 36.0 36.0 32.0 36.0 40 34.57010497442385 36.0 36.0 36.0 32.0 36.0 41 34.5397635604931 36.0 36.0 36.0 32.0 36.0 42 34.51961711934282 36.0 36.0 36.0 32.0 36.0 43 34.508140199575344 36.0 36.0 36.0 32.0 36.0 44 34.48126790453535 36.0 36.0 36.0 32.0 36.0 45 34.4210808210794 36.0 36.0 36.0 32.0 36.0 46 34.426535101488376 36.0 36.0 36.0 32.0 36.0 47 34.40243362457407 36.0 36.0 36.0 32.0 36.0 48 34.360383797893526 36.0 36.0 36.0 32.0 36.0 49 34.34448339665722 36.0 36.0 36.0 32.0 36.0 50 33.79936710692191 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 6.0 21 40.0 22 144.0 23 419.0 24 1074.0 25 2596.0 26 5702.0 27 10654.0 28 17971.0 29 28680.0 30 43150.0 31 63983.0 32 95833.0 33 157169.0 34 338108.0 35 1066059.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.73264239650964 18.2956102941578 11.483566588217306 26.488180721115256 2 15.970263097117218 20.80169082771826 37.34442643277829 25.883619642386225 3 18.761212984185256 24.638973302860588 28.714248119931295 27.88556559302286 4 12.366611432174865 16.200230947512672 36.65775817120144 34.77539944911101 5 14.04310683237342 37.17116667549325 33.81353567858291 14.972190813550421 6 33.50669941804249 36.13383439516875 17.094776796170734 13.264689390618031 7 29.58338360844054 30.672983950001885 21.175984350200835 18.56764809135674 8 27.605265155010212 33.86671354763541 19.667567341799934 18.86045395555444 9 27.555090143039735 14.112991506282249 18.81453754090028 39.51738080977774 10 15.61704072256385 27.084951918798378 32.148751712311004 25.14925564632677 11 37.317924490701785 21.209780141723936 22.630622918132833 18.84167244944144 12 24.481584023489987 23.98998902046256 29.376022677576685 22.15240427847077 13 29.786758928995532 19.89469253200363 25.30846166907532 25.010086869925512 14 23.040922390339755 20.38213813251772 25.295631279724873 31.28130819741765 15 24.870535911713816 28.20327049354413 22.374779494744725 24.551414099997324 16 25.208002450331378 25.993932044798264 24.684085785621118 24.113979719249244 17 23.57837921061985 26.296729233468863 25.83183235977067 24.293059196140618 18 24.376920804831215 25.096350764281727 27.25262053877808 23.274107892108983 19 25.401550238617943 25.510526651994525 25.41290649812813 23.6750166112594 20 25.380475641642313 25.026302298168424 25.648931064774906 23.944290995414363 21 26.236726689229954 24.71678962911439 24.384182259229554 24.6623014224261 22 25.309389824900673 25.742620205733928 24.945989520574756 24.00200044879064 23 23.950023722570947 25.224108683771306 25.77199360773623 25.053873985921516 24 24.476015088537874 25.765714906564735 25.528270807479185 24.2299991974182 25 24.546554931264602 25.379656680619945 25.631514493699186 24.44227389441627 26 23.58443952218538 26.125293392786265 26.232195104906175 24.05807198012218 27 24.76128651132978 25.866829294126575 25.219795489053492 24.15208870549015 28 23.766849440567725 25.649149454380872 25.819711736639604 24.7642893684118 29 23.996158526831074 25.68878716786353 25.598210078789513 24.71684422651588 30 24.068500083807013 25.679451012208528 26.023087057194598 24.228961846789865 31 24.534707295140993 25.539900053996828 25.125997153291486 24.79939549757069 32 24.096836135180983 25.95309318848279 25.298524942003908 24.65154573433232 33 23.772254583315362 25.4199495629205 25.91127157894047 24.896524274823665 34 24.261228911071207 25.86186093059087 26.180764352701395 23.696145805636526 35 25.009868480319547 25.61502607844882 25.693646336596252 23.681459104635376 36 23.789125180376164 26.025052563648288 25.751847166585957 24.433975089389595 37 24.897780015057965 25.861642540984903 24.906406404493584 24.33417103946355 38 24.087445382124486 25.826863996234962 25.501463483346974 24.584227138293578 39 24.642318773480294 25.366826291269497 25.199103073888303 24.79175186136191 40 25.26582109851064 25.392104888159956 25.597500312570126 23.744573700759286 41 24.053322006192438 25.551310910908505 26.35542144007198 24.039945642827078 42 25.070144011565915 26.204241235342646 25.474383172207304 23.25123158088414 43 24.14095083558593 25.344714343665526 25.838547840154096 24.675786980594445 44 23.776731570237647 25.832542125990056 25.723074336000053 24.667651967772247 45 24.05637946067595 26.087511990954305 25.519098444028653 24.337010104341093 46 23.975123199238254 25.25701768849511 25.80381156003595 24.96404755223069 47 24.545517580636268 25.002825415527173 26.011184823669502 24.44047218016706 48 24.432227972541874 26.112790587844763 25.15498837348335 24.29999306613001 49 23.96290870932289 25.559773508139656 25.877366592614393 24.59995118992307 50 23.566460979719217 26.571943659757174 25.142035372622416 24.719559987901196 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 10.5 2 14.0 3 48.0 4 82.0 5 116.5 6 151.0 7 138.0 8 125.0 9 219.0 10 313.0 11 456.5 12 600.0 13 1056.0 14 1512.0 15 2161.0 16 2810.0 17 3647.0 18 4484.0 19 5242.0 20 6000.0 21 7395.0 22 8790.0 23 9991.0 24 11192.0 25 13603.5 26 16015.0 27 20339.5 28 24664.0 29 28517.0 30 32370.0 31 36036.5 32 39703.0 33 46735.0 34 53767.0 35 61735.0 36 69703.0 37 78307.5 38 86912.0 39 88564.0 40 90216.0 41 94500.5 42 98785.0 43 99045.5 44 99306.0 45 108121.5 46 116937.0 47 124351.5 48 131766.0 49 132857.0 50 133948.0 51 126741.5 52 119535.0 53 116065.0 54 112595.0 55 112955.5 56 113316.0 57 111239.5 58 109163.0 59 99195.0 60 89227.0 61 78692.0 62 68157.0 63 60217.0 64 52277.0 65 44727.0 66 37177.0 67 33660.5 68 30144.0 69 27771.0 70 25398.0 71 20207.0 72 15016.0 73 13202.0 74 11388.0 75 8530.5 76 5673.0 77 5038.5 78 4404.0 79 3801.0 80 3198.0 81 2518.0 82 1838.0 83 1584.0 84 1330.0 85 1098.5 86 867.0 87 678.0 88 489.0 89 320.0 90 151.0 91 96.0 92 41.0 93 27.5 94 14.0 95 12.0 96 10.0 97 8.5 98 7.0 99 4.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014140726986239817 2 0.003275844089476406 3 3.8218181043891394E-4 4 2.1838960596509368E-4 5 0.0 6 6.55168817895281E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.6379220447382026E-4 47 0.0 48 0.0 49 0.0 50 1.6379220447382026E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1831589.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.064489514900515 #Duplication Level Percentage of deduplicated Percentage of total 1 78.3878981265649 43.94777492611888 2 13.66652620839578 15.324136306314365 3 3.9118095058097406 6.579408090682751 4 1.5168741172304898 3.401710921635711 5 0.7095527014288121 1.989035499476249 6 0.40962237000688045 1.377916144099167 7 0.2537275493497429 0.9957573871112047 8 0.1826841188275128 0.8193673491635144 9 0.12620543126903797 0.6368078770295829 >10 0.6601780566093252 7.005827530548394 >50 0.0843174564677483 3.3158083919388037 >100 0.08013567512184475 9.607689688434887 >500 0.007827052649140416 2.967518296856827 >1k 0.0026416302690848905 2.0312415905897443 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2499 0.13643890632669228 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1941 0.10597355629456172 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.275844089476405E-4 2 5.459740149127343E-5 5.459740149127343E-5 0.0 0.0 3.275844089476405E-4 3 5.459740149127343E-5 5.459740149127343E-5 0.0 0.0 3.275844089476405E-4 4 5.459740149127343E-5 5.459740149127343E-5 0.0 0.0 3.82181810438914E-4 5 5.459740149127343E-5 5.459740149127343E-5 0.0 0.0 3.82181810438914E-4 6 5.459740149127343E-5 5.459740149127343E-5 0.0 0.0 7.097662193865545E-4 7 5.459740149127343E-5 5.459740149127343E-5 0.0 0.0 7.097662193865545E-4 8 5.459740149127343E-5 5.459740149127343E-5 0.0 0.0 7.097662193865545E-4 9 5.459740149127343E-5 5.459740149127343E-5 0.0 0.0 7.097662193865545E-4 10 5.459740149127343E-5 5.459740149127343E-5 0.0 0.0 8.189610223691014E-4 11 5.459740149127343E-5 5.459740149127343E-5 0.0 5.459740149127343E-5 8.189610223691014E-4 12 5.459740149127343E-5 5.459740149127343E-5 0.0 5.459740149127343E-5 0.001037350628334195 13 5.459740149127343E-5 1.6379220447382026E-4 0.0 5.459740149127343E-5 0.001146545431316742 14 5.459740149127343E-5 1.6379220447382026E-4 0.0 5.459740149127343E-5 0.0012011428328080154 15 5.459740149127343E-5 1.6379220447382026E-4 0.0 5.459740149127343E-5 0.001419532438773109 16 5.459740149127343E-5 2.183896059650937E-4 0.0 1.0919480298254685E-4 0.0016379220447382027 17 5.459740149127343E-5 2.729870074563671E-4 0.0 1.0919480298254685E-4 0.0016379220447382027 18 5.459740149127343E-5 2.729870074563671E-4 0.0 1.0919480298254685E-4 0.001692519446229476 19 5.459740149127343E-5 2.729870074563671E-4 0.0 1.0919480298254685E-4 0.001692519446229476 20 5.459740149127343E-5 2.729870074563671E-4 0.0 1.6379220447382026E-4 0.00207470125666839 21 5.459740149127343E-5 2.729870074563671E-4 0.0 2.729870074563671E-4 0.00207470125666839 22 5.459740149127343E-5 2.729870074563671E-4 0.0 3.82181810438914E-4 0.00207470125666839 23 5.459740149127343E-5 2.729870074563671E-4 0.0 7.097662193865545E-4 0.0021292986581596634 24 5.459740149127343E-5 2.729870074563671E-4 0.0 0.0010919480298254684 0.002183896059650937 25 5.459740149127343E-5 2.729870074563671E-4 0.0 0.001419532438773109 0.002183896059650937 26 5.459740149127343E-5 2.729870074563671E-4 0.0 0.0017471168477207497 0.0024022856656160307 27 5.459740149127343E-5 2.729870074563671E-4 0.0 0.003002857082020038 0.002456883067107304 28 5.459740149127343E-5 2.729870074563671E-4 0.0 0.0057327271565837095 0.002456883067107304 29 5.459740149127343E-5 2.729870074563671E-4 0.0 0.010591895889307045 0.0025114804685985774 30 5.459740149127343E-5 2.729870074563671E-4 0.0 0.020801609968175174 0.0025114804685985774 31 5.459740149127343E-5 2.729870074563671E-4 0.0 0.047390544494425334 0.0025114804685985774 32 5.459740149127343E-5 2.729870074563671E-4 0.0 0.07883864775339883 0.002566077870089851 33 5.459740149127343E-5 2.729870074563671E-4 0.0 0.11159708864816288 0.002566077870089851 34 5.459740149127343E-5 2.729870074563671E-4 0.0 0.1522721527591616 0.0027298700745636713 35 5.459740149127343E-5 3.275844089476405E-4 0.0 0.19665984017156687 0.0027298700745636713 36 5.459740149127343E-5 3.275844089476405E-4 0.0 0.26441521542223717 0.0027298700745636713 37 5.459740149127343E-5 3.275844089476405E-4 0.0 0.3654750055825843 0.0027298700745636713 38 5.459740149127343E-5 3.275844089476405E-4 0.0 0.504589184582349 0.002839064877546218 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACACG 65 5.934198E-7 27.07682 4 CGCAATA 550 0.0 19.999926 36 ATACGAA 575 0.0 19.512972 40 TAGCGGC 590 0.0 18.644 30 TAGGACG 1160 0.0 18.20683 4 CAATACG 615 0.0 17.886112 38 AATACGA 620 0.0 17.741869 39 TTAGGAC 785 0.0 17.656467 3 CTAGCGG 630 0.0 17.460253 29 TGTAGGA 1350 0.0 17.27448 2 AGGACGT 1215 0.0 17.020512 5 ATTTCGT 510 0.0 16.823467 42 GTCCTAC 1310 0.0 16.627708 1 CGGTCCA 675 0.0 16.62216 10 ATAACGC 570 0.0 16.596882 3 GACGTGA 680 0.0 16.499939 7 ACCGTAT 80 0.0019889264 16.499939 8 GCAATAC 695 0.0 16.460371 37 TCCTACA 1350 0.0 16.459646 2 TCTAGCG 670 0.0 16.417849 28 >>END_MODULE