SRR4062517_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062517_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1888620
Sequences flagged as poor quality	0
Sequence length	25
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCGCAAGACGGACCAGAGCGAAAGC	2637	0.13962575849032627	No Hit
GTCTTGCGCCGGTCCAAGAATTTCA	2582	0.13671357922716057	No Hit
GTATCAACGCAGAGTACTTTTTTTT	2404	0.12728870815727886	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTG	2377	0.12585909288263386	No Hit
GAATAGGACCGCGGTTCTATTTTGT	2365	0.125223708316125	No Hit
GAACTACGACGGTATCTGATCGTCT	2213	0.11717550380701253	No Hit
GGGTAGGCACACGCTGAGCCAGTCA	2181	0.11548114496298884	No Hit
GTATCTGATCGTCTTCGAACCTCCG	2133	0.11293960669695334	No Hit
GAATAACGCCGCCGCATCGCCAGTC	2075	0.10986858129216043	No Hit
GTCCTATTCCATTATTCCTAGCTGC	2035	0.10775063273713083	No Hit
GATTAAGAGGGACGGCCGGGGGCAT	1935	0.1024557613495568	No Hit
CTATTGGAGCTGGAATTACCGCGGC	1917	0.1015026844997935	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTAA	80	7.796189E-9	15.425834	1
GTGTAAT	65	3.3996166E-6	14.604339	1
AACCGCG	265	0.0	13.98242	7
CGAACGT	150	0.0	13.929815	4
GAACCGT	85	2.6978887E-7	13.412644	6
GAACCGC	300	0.0	13.300872	6
CGGTCCA	465	0.0	13.075779	10
AAGACGG	450	0.0	12.875549	5
GGTCCAA	530	0.0	12.726576	11
CAAGACG	470	0.0	12.52875	4
ACGAACG	185	0.0	12.327094	15
AGAACCG	335	0.0	12.191921	5
TAGTACT	55	0.0030746723	12.087856	4
CGCATCG	355	0.0	12.04432	13
AATTCCG	190	0.0	11.997925	5
TAGACTG	80	2.8722015E-5	11.872946	5
CGCAAGA	465	0.0	11.842074	2
CGCGGTC	290	0.0	11.793565	10
GTCGGCG	275	0.0	11.747159	12
ATCGCCA	375	0.0	11.65657	16