##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062517_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1888620 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20817263398672 32.0 32.0 32.0 32.0 32.0 2 30.820493270218467 32.0 32.0 32.0 32.0 32.0 3 30.80541612394235 32.0 32.0 32.0 32.0 32.0 4 30.883694973049106 32.0 32.0 32.0 32.0 32.0 5 30.65654552000932 32.0 32.0 32.0 32.0 32.0 6 34.32253920852263 36.0 36.0 36.0 32.0 36.0 7 34.217306287130285 36.0 36.0 36.0 32.0 36.0 8 34.203599453569275 36.0 36.0 36.0 32.0 36.0 9 34.391500142961526 36.0 36.0 36.0 32.0 36.0 10 34.02435429043429 36.0 36.0 36.0 32.0 36.0 11 34.35252830108757 36.0 36.0 36.0 32.0 36.0 12 34.11398004892461 36.0 36.0 36.0 32.0 36.0 13 34.26075917865955 36.0 36.0 36.0 32.0 36.0 14 34.15655558026496 36.0 36.0 36.0 32.0 36.0 15 34.079263165697704 36.0 36.0 36.0 32.0 36.0 16 34.07749732608995 36.0 36.0 36.0 32.0 36.0 17 34.00144867681164 36.0 36.0 36.0 32.0 36.0 18 34.01491777064735 36.0 36.0 36.0 32.0 36.0 19 34.006776905888955 36.0 36.0 36.0 32.0 36.0 20 34.001634526797346 36.0 36.0 36.0 32.0 36.0 21 33.98784244580699 36.0 36.0 36.0 32.0 36.0 22 33.93775772786479 36.0 36.0 36.0 32.0 36.0 23 33.90071110122735 36.0 36.0 36.0 32.0 36.0 24 33.87152259321621 36.0 36.0 36.0 32.0 36.0 25 33.40723491226398 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 9.0 4 75.0 5 175.0 6 293.0 7 78.0 8 264.0 9 346.0 10 218.0 11 68.0 12 142.0 13 94.0 14 248.0 15 344.0 16 567.0 17 707.0 18 956.0 19 1361.0 20 2126.0 21 3152.0 22 5008.0 23 7473.0 24 10955.0 25 15821.0 26 22489.0 27 29457.0 28 40533.0 29 54262.0 30 70994.0 31 95981.0 32 136499.0 33 196313.0 34 428638.0 35 762974.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.79755239589528 17.12094358416042 10.781489034180778 26.300014985763525 2 17.490490068581643 19.27709695046787 35.944946180989454 27.28746679996103 3 19.24925735889819 22.73614928012793 28.14628308790435 29.868310273069532 4 12.81551721946611 14.396916213708636 35.03353231006477 37.75403425676048 5 15.184700042850643 35.76672724373965 33.3973356328256 15.651237080584105 6 35.93324236247367 34.309327762074474 16.037110177859333 13.72031969759252 7 31.305992113089165 29.730676247237646 20.3591548512237 18.604176788449486 8 28.912852700459773 32.24362113224505 19.070360972797204 19.77316519449797 9 27.21459817496314 13.937290724407564 18.348467776726064 40.499643323903236 10 16.01677193298648 26.164268467546787 31.224260993328862 26.594698606137868 11 38.41203957708812 20.656313860197358 21.527582304281335 19.40406425843319 12 24.678122851170155 23.302023485301937 28.15961819551575 23.86023546801216 13 29.500666608355004 18.56516196065023 25.26745175372333 26.666719677271438 14 23.534822176902267 19.24328634112284 24.419921954726107 32.80196952724879 15 25.49498232736047 26.77977367995878 21.708457635492003 26.01678635718875 16 26.52246116888507 25.2966366951187 22.976284436227285 25.204617699768946 17 24.67195455287639 25.580017006622402 24.59132153331029 25.156706907190916 18 25.741953817019713 24.205030547609102 25.382666856109203 24.67034877926198 19 25.89740476696662 24.78410169924647 24.650392935172455 24.668100598614455 20 25.881439905173977 24.026480039779432 24.284007332477383 25.808072722569207 21 26.914977765242526 23.961158624901657 24.11447984239512 25.0093837674607 22 26.116341762942945 23.777766701380568 24.46911063836105 25.636780897315436 23 24.641608512109332 23.631251504454244 25.152301138984534 26.574838844451893 24 25.08844675672251 24.61664235805707 24.62157300296952 25.673337882250895 25 25.284806032883118 24.116687767337012 24.622626704753905 25.975879495025968 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 143.0 1 143.0 2 389.5 3 636.0 4 636.0 5 636.0 6 1724.5 7 2813.0 8 2813.0 9 2813.0 10 3125.0 11 3437.0 12 3437.0 13 3437.0 14 4092.5 15 4748.0 16 4748.0 17 4748.0 18 7415.5 19 10083.0 20 10083.0 21 10083.0 22 16305.5 23 22528.0 24 22528.0 25 22528.0 26 33394.0 27 44260.0 28 44260.0 29 44260.0 30 54928.5 31 65597.0 32 65597.0 33 65597.0 34 85762.0 35 105927.0 36 105927.0 37 105927.0 38 123290.5 39 140654.0 40 140654.0 41 140654.0 42 164075.5 43 187497.0 44 187497.0 45 187497.0 46 215958.5 47 244420.0 48 244420.0 49 244420.0 50 251942.0 51 259464.0 52 259464.0 53 259464.0 54 245785.5 55 232107.0 56 232107.0 57 232107.0 58 216071.5 59 200036.0 60 200036.0 61 200036.0 62 177044.0 63 154052.0 64 154052.0 65 154052.0 66 127677.5 67 101303.0 68 101303.0 69 101303.0 70 75956.0 71 50609.0 72 50609.0 73 50609.0 74 39109.0 75 27609.0 76 27609.0 77 27609.0 78 22850.5 79 18092.0 80 18092.0 81 18092.0 82 12531.0 83 6970.0 84 6970.0 85 6970.0 86 5154.5 87 3339.0 88 3339.0 89 3339.0 90 2313.5 91 1288.0 92 1288.0 93 1288.0 94 757.5 95 227.0 96 227.0 97 227.0 98 504.0 99 781.0 100 781.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008524742933994134 2 0.003600512543550317 3 0.004765384248816596 4 0.015461024451716068 5 0.03531679215511855 6 0.044265124800118606 7 0.06295602079825481 8 0.08514153191218984 9 0.0928720441380479 10 0.11304550412470482 11 0.11516345267973442 12 0.12808293886541494 13 0.1167519140960066 14 0.12067011892281136 15 0.11055691457254505 16 0.10870370958689414 17 0.12157024705869894 18 0.12622973387976408 19 0.12871832343192385 20 0.11744024737639122 21 0.12622973387976408 22 0.14444409145301862 23 0.13523101523863984 24 0.1300949899926931 25 0.12834768243479366 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1888620.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.15376648089493 #Duplication Level Percentage of deduplicated Percentage of total 1 78.92926979857903 38.796708961869065 2 12.007893686483566 11.804664043856516 3 3.553547835947916 5.2401078152062 4 1.6330290714546618 3.210781185391805 5 0.9376965976379462 2.304565979511265 6 0.5703153614624928 1.6819888858676733 7 0.4139688509075889 1.4243689759513225 8 0.2961773191500252 1.1646584625950263 9 0.2282410878681323 1.0097018220974037 >10 1.2233055897139131 10.951398877446374 >50 0.09703628027855951 3.332540401666515 >100 0.08901831427686129 9.514101768664714 >500 0.014350144367544166 4.923544313282665 >1k 0.006150061871804643 4.6408685065934865 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGC 2637 0.13962575849032627 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2582 0.13671357922716057 No Hit GTATCAACGCAGAGTACTTTTTTTT 2404 0.12728870815727886 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2377 0.12585909288263386 No Hit GAATAGGACCGCGGTTCTATTTTGT 2365 0.125223708316125 No Hit GAACTACGACGGTATCTGATCGTCT 2213 0.11717550380701253 No Hit GGGTAGGCACACGCTGAGCCAGTCA 2181 0.11548114496298884 No Hit GTATCTGATCGTCTTCGAACCTCCG 2133 0.11293960669695334 No Hit GAATAACGCCGCCGCATCGCCAGTC 2075 0.10986858129216043 No Hit GTCCTATTCCATTATTCCTAGCTGC 2035 0.10775063273713083 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1935 0.1024557613495568 No Hit CTATTGGAGCTGGAATTACCGCGGC 1917 0.1015026844997935 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 5.294871387573996E-5 6 0.0 0.0 0.0 0.0 1.0589742775147991E-4 7 0.0 0.0 0.0 0.0 1.0589742775147991E-4 8 0.0 0.0 0.0 5.294871387573996E-5 1.0589742775147991E-4 9 0.0 0.0 0.0 5.294871387573996E-5 1.0589742775147991E-4 10 0.0 0.0 0.0 2.1179485550295983E-4 1.0589742775147991E-4 11 0.0 0.0 0.0 2.1179485550295983E-4 1.0589742775147991E-4 12 0.0 0.0 0.0 2.1179485550295983E-4 2.1179485550295983E-4 13 0.0 0.0 0.0 2.1179485550295983E-4 3.706409971301797E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCTAA 80 7.796189E-9 15.425834 1 GTGTAAT 65 3.3996166E-6 14.604339 1 AACCGCG 265 0.0 13.98242 7 CGAACGT 150 0.0 13.929815 4 GAACCGT 85 2.6978887E-7 13.412644 6 GAACCGC 300 0.0 13.300872 6 CGGTCCA 465 0.0 13.075779 10 AAGACGG 450 0.0 12.875549 5 GGTCCAA 530 0.0 12.726576 11 CAAGACG 470 0.0 12.52875 4 ACGAACG 185 0.0 12.327094 15 AGAACCG 335 0.0 12.191921 5 TAGTACT 55 0.0030746723 12.087856 4 CGCATCG 355 0.0 12.04432 13 AATTCCG 190 0.0 11.997925 5 TAGACTG 80 2.8722015E-5 11.872946 5 CGCAAGA 465 0.0 11.842074 2 CGCGGTC 290 0.0 11.793565 10 GTCGGCG 275 0.0 11.747159 12 ATCGCCA 375 0.0 11.65657 16 >>END_MODULE