##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062516_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1670526 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.132767762968072 32.0 32.0 32.0 32.0 32.0 2 30.716623386885328 32.0 32.0 32.0 32.0 32.0 3 30.707343674986202 32.0 32.0 32.0 32.0 32.0 4 30.796164202173447 32.0 32.0 32.0 32.0 32.0 5 30.53864291845802 32.0 32.0 32.0 32.0 32.0 6 34.20963576741697 36.0 36.0 36.0 32.0 36.0 7 34.08190713583626 36.0 36.0 36.0 32.0 36.0 8 34.063447680550915 36.0 36.0 36.0 32.0 36.0 9 34.27157913136342 36.0 36.0 36.0 32.0 36.0 10 33.86466119054717 36.0 36.0 36.0 32.0 36.0 11 34.26145657116381 36.0 36.0 36.0 32.0 36.0 12 33.992759166873185 36.0 36.0 36.0 32.0 36.0 13 34.14031568499981 36.0 36.0 36.0 32.0 36.0 14 34.02389846072435 36.0 36.0 36.0 32.0 36.0 15 33.95713326221801 36.0 36.0 36.0 32.0 36.0 16 33.941766246080576 36.0 36.0 36.0 32.0 36.0 17 33.85829553086872 36.0 36.0 36.0 32.0 36.0 18 33.88512899529849 36.0 36.0 36.0 32.0 36.0 19 33.87623179764936 36.0 36.0 36.0 32.0 36.0 20 33.86997269123617 36.0 36.0 36.0 32.0 36.0 21 33.8419845006902 36.0 36.0 36.0 32.0 36.0 22 33.786983860173386 36.0 36.0 36.0 32.0 36.0 23 33.74245656757213 36.0 36.0 36.0 32.0 36.0 24 33.70875760089936 36.0 36.0 36.0 27.0 36.0 25 33.234426162777474 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 10.0 4 60.0 5 171.0 6 304.0 7 84.0 8 237.0 9 296.0 10 166.0 11 73.0 12 127.0 13 103.0 14 278.0 15 367.0 16 535.0 17 739.0 18 1115.0 19 1593.0 20 2450.0 21 3583.0 22 5511.0 23 8159.0 24 11292.0 25 16227.0 26 22102.0 27 28677.0 28 37969.0 29 50918.0 30 65037.0 31 87661.0 32 124315.0 33 177349.0 34 375978.0 35 647039.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.469161286614685 16.829764459089255 10.766250311308646 25.93482394298741 2 16.975343377648365 19.667589364392168 36.61832879966285 26.738738458296616 3 19.399758624735696 23.446865114808897 28.15308411975853 29.000292140696875 4 12.667809394033192 14.877567918537867 35.46007149729415 36.994551190134786 5 14.753479882434947 36.265692706798795 33.56047485933155 15.42035255143471 6 34.956235832417526 34.73859780984522 16.627748548431047 13.677417809306212 7 30.5981812376713 30.180240892261008 20.595407747920333 18.626170122147364 8 28.637917904675287 32.58738258765221 19.362125234644946 19.41257427302756 9 27.217481600255017 14.21904969054634 18.41316692521881 40.150301783979835 10 15.757024737913328 26.631314233110302 31.615635780434538 25.996025248541834 11 37.94686308824587 20.926210054419485 21.557847673387194 19.569079183947448 12 24.282212045650713 23.732557303155268 28.622566414117195 23.362664237076817 13 29.667785436020377 19.017980221756066 25.261552292478274 26.05268204974528 14 23.609566934679087 19.350596809623273 24.84945653313994 32.190379722557694 15 25.509563816609166 26.716120321244997 22.35212895825505 25.422186903890793 16 26.232911355992744 25.571059753621483 23.617267111416883 24.57876177896889 17 24.297709877912098 25.747900771365384 25.246663110514422 24.707726240208096 18 25.350173468335736 24.570285245720836 26.086424873944747 23.993116411998685 19 25.468577200075526 25.498068387185718 24.964889303150823 24.068465109587933 20 25.380436541566624 24.174427232483737 25.31432838790802 25.13080783804162 21 26.522477442836102 24.465254504989158 24.093083029184502 24.919185022990234 22 25.468432901367244 24.558216498646544 24.73406057117848 25.23929002880773 23 24.31271251061054 24.22920693078329 25.204897395441183 26.25318316316499 24 24.475363090282087 25.368575074823962 24.974988745684847 25.181073089209104 25 25.115834952724953 24.4737526688493 24.768000421980886 25.64241195644486 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 208.0 1 208.0 2 539.0 3 870.0 4 870.0 5 870.0 6 2103.5 7 3337.0 8 3337.0 9 3337.0 10 3632.0 11 3927.0 12 3927.0 13 3927.0 14 4355.0 15 4783.0 16 4783.0 17 4783.0 18 7711.0 19 10639.0 20 10639.0 21 10639.0 22 16656.0 23 22673.0 24 22673.0 25 22673.0 26 33652.0 27 44631.0 28 44631.0 29 44631.0 30 55423.5 31 66216.0 32 66216.0 33 66216.0 34 82402.5 35 98589.0 36 98589.0 37 98589.0 38 112937.5 39 127286.0 40 127286.0 41 127286.0 42 149076.0 43 170866.0 44 170866.0 45 170866.0 46 201066.5 47 231267.0 48 231267.0 49 231267.0 50 228597.0 51 225927.0 52 225927.0 53 225927.0 54 209409.0 55 192891.0 56 192891.0 57 192891.0 58 178658.5 59 164426.0 60 164426.0 61 164426.0 62 145587.0 63 126748.0 64 126748.0 65 126748.0 66 104493.0 67 82238.0 68 82238.0 69 82238.0 70 62625.5 71 43013.0 72 43013.0 73 43013.0 74 33566.5 75 24120.0 76 24120.0 77 24120.0 78 19581.0 79 15042.0 80 15042.0 81 15042.0 82 10538.5 83 6035.0 84 6035.0 85 6035.0 86 4405.5 87 2776.0 88 2776.0 89 2776.0 90 1917.0 91 1058.0 92 1058.0 93 1058.0 94 634.5 95 211.0 96 211.0 97 211.0 98 480.0 99 749.0 100 749.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009458098826357685 2 0.003711405868570737 3 0.005866415727740844 4 0.015144930399167686 5 0.03843100915520022 6 0.0467517416669959 7 0.06878073133851254 8 0.09068999824007529 9 0.09679585950772392 10 0.11936360164403308 11 0.12008193826375646 12 0.13205421525914593 13 0.1212791659632954 14 0.12397292828725803 15 0.1133176017613614 16 0.11218023544679939 17 0.1230750075126038 18 0.13229366079905372 19 0.1335507498835696 20 0.12259611643278823 21 0.13223379941407676 22 0.15390362077573172 23 0.14211092793527308 24 0.1363043735925092 25 0.13193449248919203 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1670526.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.223050387697 #Duplication Level Percentage of deduplicated Percentage of total 1 78.69922593075087 41.099136412543544 2 12.591465829653764 13.151295089539476 3 3.8561376341378746 6.041378099084309 4 1.5507733993239312 3.239444694911753 5 0.8294706587084082 2.165874400242271 6 0.5339478244819778 1.6730630485394111 7 0.3477709725150903 1.2713162714723767 8 0.24889081830878138 1.0398270196459705 9 0.1871869450310836 0.8797925936049614 >10 0.9753230270223838 9.184602386111953 >50 0.0820981288506336 3.014031617904254 >100 0.08115607072257627 9.035543487824063 >500 0.011724872015578 4.115073852954184 >1k 0.004712938751359784 3.7819059480104102 >5k 1.1494972564292156E-4 0.30771507761113276 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 5126 0.3068494593918323 No Hit TCCATGTACTCTGCGTTGATACCAC 4308 0.2578828464806893 No Hit GTATCAACGCAGAGTACTTTTTTTT 3073 0.1839540360341593 No Hit GAGTACATGGAAGCAGTGGTATCAA 2229 0.1334310271136157 No Hit TATCAACGCAGAGTACTTTTTTTTT 2132 0.12762447277085182 No Hit CATGTACTCTGCGTTGATACCACTG 1960 0.11732831455481686 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1943 0.11631067101020877 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1849 0.1106837008223757 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1839 0.11008508697260622 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1826 0.10930688896790591 No Hit GAATAACGCCGCCGCATCGCCAGTC 1780 0.10655326525896634 No Hit GAATAGGACCGCGGTTCTATTTTGT 1753 0.10493700786458876 No Hit GAACTACGACGGTATCTGATCGTCT 1703 0.10194393861574139 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 5.986138497694738E-5 7 0.0 0.0 0.0 0.0 5.986138497694738E-5 8 0.0 0.0 0.0 0.0 1.1972276995389477E-4 9 0.0 0.0 0.0 1.1972276995389477E-4 1.7958415493084213E-4 10 0.0 0.0 0.0 1.7958415493084213E-4 1.7958415493084213E-4 11 0.0 0.0 0.0 2.3944553990778953E-4 1.7958415493084213E-4 12 0.0 0.0 0.0 2.993069248847369E-4 1.7958415493084213E-4 13 0.0 0.0 0.0 2.993069248847369E-4 1.7958415493084213E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAT 75 9.734158E-7 13.925667 1 ACTCTAA 265 0.0 12.906292 10 GATCTAT 60 4.1113497E-4 12.6596985 1 CGACCAT 205 0.0 12.512807 10 TAGGACT 190 0.0 12.499112 4 CGCGTAA 115 5.320544E-9 12.391911 10 CAAGACG 345 0.0 12.390425 4 CGCATCG 285 0.0 12.333937 13 CGAACGA 155 1.8189894E-12 12.260501 16 TTAGACC 70 1.09171684E-4 12.213418 4 TCGGTTG 55 0.0030640443 12.093312 17 ACGAACG 165 0.0 12.091863 15 AAGACGG 370 0.0 12.067434 5 TTTGAAC 335 0.0 11.907462 3 CGGCTAA 80 2.8661016E-5 11.875225 9 TCGCGTA 120 1.0011718E-8 11.875225 9 GTAATAC 105 2.7289934E-7 11.758955 3 TCTAGAT 275 0.0 11.741806 2 ATAACGA 170 1.8189894E-12 11.735868 12 CGGACAT 170 1.8189894E-12 11.735165 5 >>END_MODULE