##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062515_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2127571 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.298192633759342 32.0 32.0 32.0 32.0 32.0 2 31.385695236492694 32.0 32.0 32.0 32.0 32.0 3 31.472834044081257 32.0 32.0 32.0 32.0 32.0 4 31.57859361685227 32.0 32.0 32.0 32.0 32.0 5 31.507875412853437 32.0 32.0 32.0 32.0 32.0 6 35.089936364050835 36.0 36.0 36.0 36.0 36.0 7 35.10523644099304 36.0 36.0 36.0 36.0 36.0 8 35.04344249851121 36.0 36.0 36.0 36.0 36.0 9 35.18375461970482 36.0 36.0 36.0 36.0 36.0 10 35.04451508316291 36.0 36.0 36.0 36.0 36.0 11 35.18848442660668 36.0 36.0 36.0 36.0 36.0 12 35.09066630443825 36.0 36.0 36.0 36.0 36.0 13 35.138068247781156 36.0 36.0 36.0 36.0 36.0 14 35.100465742388856 36.0 36.0 36.0 36.0 36.0 15 35.061169756496966 36.0 36.0 36.0 36.0 36.0 16 35.0715412082605 36.0 36.0 36.0 36.0 36.0 17 35.04649151544179 36.0 36.0 36.0 36.0 36.0 18 35.057321236283066 36.0 36.0 36.0 36.0 36.0 19 35.04243712665758 36.0 36.0 36.0 36.0 36.0 20 35.03702344128586 36.0 36.0 36.0 36.0 36.0 21 35.03520258548363 36.0 36.0 36.0 36.0 36.0 22 35.014250053229716 36.0 36.0 36.0 36.0 36.0 23 34.96982568384322 36.0 36.0 36.0 32.0 36.0 24 34.952328735445256 36.0 36.0 36.0 32.0 36.0 25 34.92393626346665 36.0 36.0 36.0 32.0 36.0 26 34.883115064080116 36.0 36.0 36.0 32.0 36.0 27 34.864145544379014 36.0 36.0 36.0 32.0 36.0 28 34.853414527646784 36.0 36.0 36.0 32.0 36.0 29 34.82481665711744 36.0 36.0 36.0 32.0 36.0 30 34.81186620799024 36.0 36.0 36.0 32.0 36.0 31 34.81257593753628 36.0 36.0 36.0 32.0 36.0 32 34.77301768072605 36.0 36.0 36.0 32.0 36.0 33 34.76310120790328 36.0 36.0 36.0 32.0 36.0 34 34.74832990297386 36.0 36.0 36.0 32.0 36.0 35 34.72584886708834 36.0 36.0 36.0 32.0 36.0 36 34.695109117392555 36.0 36.0 36.0 32.0 36.0 37 34.683273084658516 36.0 36.0 36.0 32.0 36.0 38 34.65080601305432 36.0 36.0 36.0 32.0 36.0 39 34.64425958052634 36.0 36.0 36.0 32.0 36.0 40 34.63555011795141 36.0 36.0 36.0 32.0 36.0 41 34.60834726549666 36.0 36.0 36.0 32.0 36.0 42 34.586387951330416 36.0 36.0 36.0 32.0 36.0 43 34.57399212529218 36.0 36.0 36.0 32.0 36.0 44 34.5466078452846 36.0 36.0 36.0 32.0 36.0 45 34.50586090898964 36.0 36.0 36.0 32.0 36.0 46 34.5099627697501 36.0 36.0 36.0 32.0 36.0 47 34.48498075974903 36.0 36.0 36.0 32.0 36.0 48 34.44482087789315 36.0 36.0 36.0 32.0 36.0 49 34.43065354810721 36.0 36.0 36.0 32.0 36.0 50 33.90611876172405 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 13.0 21 48.0 22 152.0 23 472.0 24 1342.0 25 3060.0 26 6475.0 27 12204.0 28 21033.0 29 32762.0 30 48380.0 31 70188.0 32 104134.0 33 171613.0 34 378889.0 35 1276805.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.108748547424476 17.85873444474948 11.281481871481382 26.751035136344665 2 16.67461819726972 20.504608049079824 36.10353691915244 26.717236834498014 3 18.94332574091848 23.87808204884276 28.443401414388862 28.735190795849896 4 12.599356354600017 15.729172590877194 35.88283153213832 35.78863952238447 5 14.61859557213367 36.40588257689167 33.22464914214379 15.750872708830869 6 34.37571384389486 35.4228258958829 16.540732461413654 13.660727798808592 7 30.202202512725783 30.232189775189532 20.710622917224818 18.854984794859863 8 28.25536727093949 32.6199689693082 19.512580308718253 19.612083451034064 9 27.713199700503534 13.866188249416822 18.38472135595005 40.03589069412959 10 16.11509087123297 26.429999280870064 31.401349238168784 26.053560609728184 11 37.9996249243856 20.976644257700446 21.912970236950965 19.110760580962985 12 24.61609976823335 23.584312814942486 28.600784650665005 23.198802766159154 13 29.756844777448084 19.185117676448872 25.187784567471542 25.870252978631502 14 23.531764627361436 19.626795063478493 24.691302898939682 32.15013741022039 15 25.494707344666757 26.9893225654984 21.942957485320115 25.573012604514727 16 25.98667682535624 25.58321202911677 23.621961382252344 24.808149763274645 17 24.35476888902885 25.53324894915375 24.96447827123043 25.147503890586965 18 25.149054955157784 24.64895413596068 26.13304091849344 24.0689499903881 19 25.931637534070546 24.750666370240992 24.99535855677672 24.322337538911746 20 25.749786963631294 24.27928374658237 24.845281309060894 25.125647980725436 21 27.03862761806774 23.948483975387898 24.040513806589768 24.9723745999546 22 25.92477524839359 24.42090064209373 24.60998951386346 25.044334595649214 23 24.75898571657538 24.001455180579168 25.23671360438735 26.0028454984581 24 24.99860169178843 24.982433018686567 24.867184220879114 25.15178106864589 25 25.130724192048113 24.349739679662864 25.14891394928771 25.370622179001312 26 24.578263193096728 25.166398677176932 25.537479125255985 24.717859004470355 27 25.636606251918266 24.53539740859412 24.759220726358837 25.068775613128775 28 24.50127398803612 24.723969258840246 25.480277743962482 25.29447900916115 29 24.699246229620538 24.673677165180386 25.177491138956114 25.449585466242958 30 24.547899929074045 25.08485028231725 25.570380494940004 24.796869293668696 31 25.306887525727696 24.599508077521268 24.541319655137244 25.552284741613796 32 24.982621026513332 24.772851293799363 24.631563411984843 25.612964267702466 33 24.625500159571644 24.275241578306904 25.251190207048317 25.84806805507313 34 25.21838284127768 24.55067304451884 25.51252108625282 24.718423027950653 35 25.843602869187443 24.371360579740934 25.243434884194226 24.54160166687739 36 24.578075185269963 25.0031608815875 24.98182199324958 25.43694193989296 37 25.586267156301716 24.718094014253815 24.65830752534228 25.03733130410219 38 24.73543773627296 24.571682919159922 25.22989832066709 25.462981023900028 39 25.41405198698422 24.25089456474073 24.66831894211756 25.66673450615749 40 25.58998031088034 24.57633611287238 25.229381299143483 24.604302277103795 41 24.50409410543761 24.752029426985047 25.75570921017442 24.988167257402928 42 25.81121852102703 25.093028622781567 24.983373057820398 24.112379798371006 43 24.775060385763858 24.066552890596835 25.555856890322342 25.60252983331696 44 24.418221530562317 24.65482938054711 25.242682852887167 25.684266236003406 45 24.551002058215683 24.907229887980236 25.325923318187737 25.215844735616344 46 24.48067464823686 24.31983372564355 25.399799207357887 25.799692418761705 47 24.640505365275878 24.24394967028112 25.790737790060962 25.32480717438204 48 25.183695397239386 25.05251293611353 24.84443527384045 24.919356392806634 49 24.34804760922197 24.97698079171036 25.31703994837305 25.35793165069462 50 24.139005597468284 25.34300885188682 25.032137618098403 25.48584793254649 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 10.0 1 16.0 2 22.0 3 58.0 4 94.0 5 142.5 6 191.0 7 209.0 8 227.0 9 323.5 10 420.0 11 603.0 12 786.0 13 1368.5 14 1951.0 15 2791.5 16 3632.0 17 4391.5 18 5151.0 19 5659.0 20 6167.0 21 7313.5 22 8460.0 23 9432.0 24 10404.0 25 12405.5 26 14407.0 27 18497.5 28 22588.0 29 25909.0 30 29230.0 31 31956.5 32 34683.0 33 39980.5 34 45278.0 35 52378.5 36 59479.0 37 69775.0 38 80071.0 39 85338.5 40 90606.0 41 98909.5 42 107213.0 43 109766.0 44 112319.0 45 123243.0 46 134167.0 47 142774.5 48 151382.0 49 156460.5 50 161539.0 51 156632.5 52 151726.0 53 148514.0 54 145302.0 55 146483.5 56 147665.0 57 144768.5 58 141872.0 59 129829.0 60 117786.0 61 104110.5 62 90435.0 63 79701.0 64 68967.0 65 59551.5 66 50136.0 67 44899.5 68 39663.0 69 36694.0 70 33725.0 71 26638.5 72 19552.0 73 17320.0 74 15088.0 75 11419.0 76 7750.0 77 7035.0 78 6320.0 79 5359.5 80 4399.0 81 3541.5 82 2684.0 83 2309.0 84 1934.0 85 1596.5 86 1259.0 87 904.5 88 550.0 89 366.0 90 182.0 91 117.0 92 52.0 93 39.0 94 26.0 95 17.0 96 8.0 97 8.0 98 8.0 99 6.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014805616357808974 2 0.0046061917557627926 3 4.2301761022311355E-4 4 9.400391338291413E-5 5 0.0 6 2.3500978345728532E-4 7 4.7001956691457065E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.410058700743712E-4 47 4.7001956691457065E-5 48 0.0 49 0.0 50 9.400391338291413E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2127571.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.05493795027707 #Duplication Level Percentage of deduplicated Percentage of total 1 79.58346032809658 43.01879009903598 2 12.656980027301085 13.683445400273127 3 3.459317401331125 5.609795624378032 4 1.393390176394219 3.012784781020605 5 0.7014475714729059 1.8958352475670237 6 0.4234633786119008 1.3734171993048594 7 0.29783702483327684 1.126969332766054 8 0.21510391022111475 0.9301942815891464 9 0.1634722651694171 0.7952834835291673 >10 0.9180153381688717 9.31666879671874 >50 0.0918394868637411 3.4948197836805575 >100 0.08229577403660059 9.37475188548807 >500 0.009792546143224824 3.5749994585219422 >1k 0.0035847713560019433 2.7922446261267053 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2268 0.10660043777622463 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2247 0.10561339668570403 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2236 0.105096375162098 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.7001956691457065E-5 2 0.0 0.0 0.0 0.0 4.7001956691457065E-5 3 0.0 0.0 0.0 0.0 4.7001956691457065E-5 4 0.0 0.0 0.0 0.0 4.7001956691457065E-5 5 0.0 0.0 0.0 0.0 4.7001956691457065E-5 6 0.0 0.0 0.0 0.0 1.410058700743712E-4 7 0.0 0.0 0.0 0.0 1.410058700743712E-4 8 0.0 0.0 0.0 0.0 1.410058700743712E-4 9 0.0 0.0 0.0 0.0 1.410058700743712E-4 10 0.0 0.0 0.0 0.0 1.410058700743712E-4 11 0.0 0.0 0.0 0.0 1.410058700743712E-4 12 0.0 0.0 0.0 0.0 2.820117401487424E-4 13 0.0 0.0 0.0 0.0 3.760156535316565E-4 14 0.0 0.0 0.0 4.7001956691457065E-5 3.760156535316565E-4 15 0.0 0.0 0.0 4.7001956691457065E-5 4.230176102231136E-4 16 0.0 0.0 0.0 9.400391338291413E-5 4.230176102231136E-4 17 0.0 0.0 0.0 9.400391338291413E-5 5.170215236060277E-4 18 0.0 0.0 0.0 1.8800782676582826E-4 5.170215236060277E-4 19 0.0 0.0 0.0 2.3500978345728532E-4 5.170215236060277E-4 20 0.0 0.0 0.0 4.230176102231136E-4 6.110254369889418E-4 21 0.0 0.0 0.0 5.640234802974848E-4 6.110254369889418E-4 22 0.0 0.0 0.0 8.930371771376842E-4 6.580273936803989E-4 23 0.0 0.0 0.0 0.001457060657435169 6.580273936803989E-4 24 0.0 0.0 0.0 0.00272611348810451 7.05029350371856E-4 25 0.0 0.0 0.0 0.003478144795167823 7.05029350371856E-4 26 0.0 0.0 0.0 0.00432418001561405 7.05029350371856E-4 27 0.0 0.0 0.0 0.00625126023996379 7.05029350371856E-4 28 0.0 0.0 0.0 0.013724571353905464 7.05029350371856E-4 29 0.0 0.0 0.0 0.028483185755022983 7.05029350371856E-4 30 0.0 0.0 0.0 0.05668435976989722 7.05029350371856E-4 31 0.0 0.0 0.0 0.1137447351933261 7.05029350371856E-4 32 0.0 0.0 0.0 0.18213258217939612 7.05029350371856E-4 33 0.0 0.0 0.0 0.25094344677568925 7.05029350371856E-4 34 0.0 0.0 0.0 0.3310347809779321 7.52031307063313E-4 35 0.0 0.0 0.0 0.415967316719395 7.52031307063313E-4 36 0.0 0.0 0.0 0.5420735665225743 7.52031307063313E-4 37 0.0 0.0 0.0 0.7288593424144247 7.52031307063313E-4 38 0.0 0.0 0.0 0.9727054937297039 7.52031307063313E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATCTA 70 1.1329957E-6 25.142735 41 GTATCAA 4095 0.0 19.021353 1 TATACGG 60 0.007414114 18.333244 5 GCATATA 265 0.0 18.267069 1 GCGCAAA 540 0.0 17.111029 22 TACCGTT 90 2.2164488E-4 17.111029 7 CGCGCAA 545 0.0 16.550379 21 TAGTACG 175 3.6288839E-9 16.343546 2 CCTTATA 285 0.0 16.21121 2 AACGCAG 4790 0.0 16.121008 6 GTCCTAA 550 0.0 16.002556 1 CGACGGT 725 0.0 15.779235 7 TAGGACG 575 0.0 15.686881 4 GTAGAAC 830 0.0 15.638479 3 CGCAAAT 585 0.0 15.41873 23 TATACCG 100 4.9460714E-4 15.399926 5 GTGTACG 115 8.211017E-5 15.306792 1 TATGGCG 710 0.0 15.183025 16 ATACCGT 610 0.0 15.147467 6 GACGGTA 730 0.0 15.068421 8 >>END_MODULE