##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062514_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1603966 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.085739972044294 32.0 32.0 32.0 32.0 32.0 2 30.658370563964574 32.0 32.0 32.0 32.0 32.0 3 30.642858389766367 32.0 32.0 32.0 32.0 32.0 4 30.73338462286607 32.0 32.0 32.0 32.0 32.0 5 30.474480132371884 32.0 32.0 32.0 32.0 32.0 6 34.127240228284144 36.0 36.0 36.0 32.0 36.0 7 33.983615612799774 36.0 36.0 36.0 32.0 36.0 8 33.97248133688619 36.0 36.0 36.0 32.0 36.0 9 34.19274847471829 36.0 36.0 36.0 32.0 36.0 10 33.76541772082451 36.0 36.0 36.0 32.0 36.0 11 34.17287523550998 36.0 36.0 36.0 32.0 36.0 12 33.8862064407849 36.0 36.0 36.0 32.0 36.0 13 34.045720420507664 36.0 36.0 36.0 32.0 36.0 14 33.926956057672044 36.0 36.0 36.0 32.0 36.0 15 33.856799957106325 36.0 36.0 36.0 32.0 36.0 16 33.85858553111475 36.0 36.0 36.0 32.0 36.0 17 33.772195295910265 36.0 36.0 36.0 32.0 36.0 18 33.79601437935717 36.0 36.0 36.0 32.0 36.0 19 33.78155147927076 36.0 36.0 36.0 32.0 36.0 20 33.77896913026835 36.0 36.0 36.0 32.0 36.0 21 33.76218635557113 36.0 36.0 36.0 32.0 36.0 22 33.708213889820605 36.0 36.0 36.0 27.0 36.0 23 33.672258015444214 36.0 36.0 36.0 27.0 36.0 24 33.64069500226314 36.0 36.0 36.0 27.0 36.0 25 33.17277361240824 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 11.0 4 66.0 5 154.0 6 274.0 7 82.0 8 228.0 9 265.0 10 182.0 11 60.0 12 124.0 13 84.0 14 231.0 15 287.0 16 477.0 17 687.0 18 951.0 19 1400.0 20 2315.0 21 3435.0 22 5432.0 23 8265.0 24 11636.0 25 16700.0 26 22841.0 27 29142.0 28 39064.0 29 51452.0 30 65360.0 31 88169.0 32 124867.0 33 174691.0 34 365524.0 35 589510.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.9100587657631 17.31566723302106 10.794631583869812 25.97964241734603 2 17.049209559602872 20.08870788744548 36.63327755318857 26.228804999763078 3 19.319804999460686 23.97223505558039 27.991705182328246 28.716254762630673 4 12.575285663065674 15.080328609954949 36.009477934184474 36.3349077927949 5 14.845414448441547 36.2876890376853 33.267950784091646 15.598945729781514 6 34.08256357125526 35.187852302986336 17.0251889812943 13.704395144464106 7 30.25179519492916 30.480507084079385 20.819332580526424 18.448365140465032 8 28.302548464250926 32.23091865393963 19.81763077251395 19.648902109295488 9 27.327960740214696 14.2622502736428 18.901884235054485 39.50790475108802 10 16.129529597259552 26.340793246753897 31.28987799564814 26.23979916033841 11 37.65039127479369 21.25923258082819 21.98379472570192 19.106581418676203 12 24.817305447312926 23.88613444171566 28.415635881921826 22.88092422904959 13 29.25257667608785 19.41002356959522 25.497608085569617 25.839791668747313 14 23.467257761869863 20.0110736717524 24.921067317187664 31.600601249190074 15 25.30190115966995 27.154377161117978 22.372517444981213 25.17120423423086 16 25.893273981460446 25.839722480894974 23.784231142756568 24.482772394888016 17 23.935244860443124 25.784642657619838 25.359620732381003 24.920491749556035 18 24.994459755979562 24.5675956589457 26.39547042133946 24.04247416373528 19 25.32102944169281 25.156909577383544 25.39325716440328 24.128803816520357 20 25.583610529739026 24.247637250453014 25.24648060956785 24.92227161024011 21 26.65476819199369 24.199787001072487 24.433136939832174 24.712307867101654 22 25.646649821022837 24.529642526446974 24.959524875421533 24.864182777108656 23 24.13769853161522 24.200442013784837 25.65184546998302 26.01001398461692 24 24.559070671051614 25.394607714608913 25.250336487198506 24.79598512714097 25 24.73044375026531 24.711715895953034 25.374744364788636 25.183095988993013 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 193.0 1 193.0 2 494.5 3 796.0 4 796.0 5 796.0 6 2283.0 7 3770.0 8 3770.0 9 3770.0 10 3981.5 11 4193.0 12 4193.0 13 4193.0 14 4381.0 15 4569.0 16 4569.0 17 4569.0 18 7394.0 19 10219.0 20 10219.0 21 10219.0 22 16815.5 23 23412.0 24 23412.0 25 23412.0 26 35020.5 27 46629.0 28 46629.0 29 46629.0 30 58193.0 31 69757.0 32 69757.0 33 69757.0 34 85504.5 35 101252.0 36 101252.0 37 101252.0 38 114787.5 39 128323.0 40 128323.0 41 128323.0 42 147015.5 43 165708.0 44 165708.0 45 165708.0 46 190141.5 47 214575.0 48 214575.0 49 214575.0 50 213794.0 51 213013.0 52 213013.0 53 213013.0 54 196437.5 55 179862.0 56 179862.0 57 179862.0 58 165058.0 59 150254.0 60 150254.0 61 150254.0 62 133926.5 63 117599.0 64 117599.0 65 117599.0 66 98549.5 67 79500.0 68 79500.0 69 79500.0 70 60038.5 71 40577.0 72 40577.0 73 40577.0 74 31976.0 75 23375.0 76 23375.0 77 23375.0 78 19227.5 79 15080.0 80 15080.0 81 15080.0 82 10689.5 83 6299.0 84 6299.0 85 6299.0 86 4682.5 87 3066.0 88 3066.0 89 3066.0 90 2060.5 91 1055.0 92 1055.0 93 1055.0 94 612.0 95 169.0 96 169.0 97 169.0 98 445.0 99 721.0 100 721.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008790710027519286 2 0.0031172730594040024 3 0.004551218666729843 4 0.01502525614632729 5 0.03628505841146259 6 0.04769427780888123 7 0.06708371623837413 8 0.08684722743499551 9 0.09426633731637703 10 0.11795761256784745 11 0.11814464895141168 12 0.13167361402922506 13 0.11858106717972826 14 0.12269586761814154 15 0.11134899368191095 16 0.11035146630290167 17 0.12038908555418257 18 0.12787054089675218 19 0.13017732296071113 20 0.11926686725279713 21 0.1296785592712065 22 0.1474470157098093 23 0.13753408738090458 24 0.13229706864110585 25 0.12930448650407803 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1603966.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.667024522973875 #Duplication Level Percentage of deduplicated Percentage of total 1 78.24247498872722 38.86070924003286 2 13.086418969875574 12.999269837894412 3 3.9037453693122273 5.816622509672284 4 1.5726758374749898 3.1244051754623516 5 0.8218231943834488 2.040875637449574 6 0.48874982669333633 1.45648497767863 7 0.3179113750314615 1.105279844187396 8 0.22555230653928052 0.8962009552079813 9 0.16372597086031648 0.7318603628790341 >10 0.9432922829583986 8.822115787999147 >50 0.10527088575954589 3.676789205131001 >100 0.1083893768994171 11.46511700116117 >500 0.014443432583359088 4.800526268206516 >1k 0.00552618290145913 4.203743197037789 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3541 0.22076527806699145 No Hit GTACATGGAAGCAGTGGTATCAACG 2622 0.16346979923514587 No Hit TCCATGTACTCTGCGTTGATACCAC 2257 0.14071370590149668 No Hit TATCAACGCAGAGTACTTTTTTTTT 2157 0.13447915978268865 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2138 0.13329459602011512 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2112 0.13167361402922506 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2066 0.1288057228145734 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1934 0.1205761219377468 No Hit GAATAGGACCGCGGTTCTATTTTGT 1923 0.11989032186467793 No Hit GAACTACGACGGTATCTGATCGTCT 1882 0.11733415795596663 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1846 0.11508972135319577 No Hit GAATAACGCCGCCGCATCGCCAGTC 1788 0.11147368460428712 No Hit GTATCTGATCGTCTTCGAACCTCCG 1706 0.10636135678686456 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1695 0.10567555671379568 No Hit GGGTAGGCACACGCTGAGCCAGTCA 1643 0.10243359273201552 No Hit GTCCTATTCCATTATTCCTAGCTGC 1607 0.10018915612924463 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 6.234546118808005E-5 6 0.0 0.0 0.0 0.0 6.234546118808005E-5 7 0.0 0.0 0.0 0.0 6.234546118808005E-5 8 0.0 0.0 0.0 0.0 6.234546118808005E-5 9 0.0 0.0 0.0 0.0 6.234546118808005E-5 10 0.0 0.0 0.0 0.0 6.234546118808005E-5 11 0.0 0.0 0.0 6.234546118808005E-5 6.234546118808005E-5 12 0.0 0.0 0.0 6.234546118808005E-5 2.493818447523202E-4 13 0.0 0.0 0.0 6.234546118808005E-5 3.740727671284803E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTTA 80 1.2855162E-7 14.252693 15 AGGCCCG 340 0.0 13.692054 10 CGGTTCT 395 0.0 13.469218 12 GCTCGTA 120 5.0931703E-11 13.459195 9 TACGCGT 50 0.0015006225 13.298777 5 TTATACC 50 0.0015027423 13.296285 4 ACGGTAT 355 0.0 12.578271 9 TAGAGTG 235 0.0 12.530761 5 ACGCGCG 130 1.9826984E-10 12.424261 13 CGGTCCA 310 0.0 12.25885 10 GGTTCTA 450 0.0 12.245612 13 GTCTTAG 125 1.4260877E-9 12.151671 1 TCCTATA 80 2.8848131E-5 11.867608 2 TCTCGTC 115 7.066774E-8 11.56596 12 GCGCGCT 140 6.7848305E-10 11.537894 15 TGAGTTA 170 1.0913936E-11 11.177187 12 GCATCGC 290 0.0 11.138993 14 CTCGTAG 145 1.2150849E-9 11.138645 10 GACGGTA 395 0.0 11.064001 8 CGTCGTA 275 0.0 11.055254 10 >>END_MODULE