##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062512_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1785055 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.268302097134264 32.0 32.0 32.0 32.0 32.0 2 31.420003305220288 32.0 32.0 32.0 32.0 32.0 3 31.493887863399166 32.0 32.0 32.0 32.0 32.0 4 31.595455602208336 32.0 32.0 32.0 32.0 32.0 5 31.528356269134566 32.0 32.0 32.0 32.0 32.0 6 35.113737671948485 36.0 36.0 36.0 36.0 36.0 7 35.12170381304778 36.0 36.0 36.0 36.0 36.0 8 35.066688701468586 36.0 36.0 36.0 36.0 36.0 9 35.19051065653439 36.0 36.0 36.0 36.0 36.0 10 35.07134289979861 36.0 36.0 36.0 36.0 36.0 11 35.19348311396568 36.0 36.0 36.0 36.0 36.0 12 35.10404161216321 36.0 36.0 36.0 36.0 36.0 13 35.137734691648156 36.0 36.0 36.0 36.0 36.0 14 35.103615854973654 36.0 36.0 36.0 36.0 36.0 15 35.06997655534423 36.0 36.0 36.0 36.0 36.0 16 35.082557680295565 36.0 36.0 36.0 36.0 36.0 17 35.05610975572181 36.0 36.0 36.0 36.0 36.0 18 35.07497696149419 36.0 36.0 36.0 36.0 36.0 19 35.05146844214884 36.0 36.0 36.0 36.0 36.0 20 35.029958180560264 36.0 36.0 36.0 36.0 36.0 21 35.01983076151715 36.0 36.0 36.0 36.0 36.0 22 35.00657290671716 36.0 36.0 36.0 36.0 36.0 23 34.972520734655234 36.0 36.0 36.0 32.0 36.0 24 34.948980283520676 36.0 36.0 36.0 32.0 36.0 25 34.92615129505813 36.0 36.0 36.0 32.0 36.0 26 34.88993168277728 36.0 36.0 36.0 32.0 36.0 27 34.87360557517835 36.0 36.0 36.0 32.0 36.0 28 34.8539664043965 36.0 36.0 36.0 32.0 36.0 29 34.82657509152379 36.0 36.0 36.0 32.0 36.0 30 34.81074980882942 36.0 36.0 36.0 32.0 36.0 31 34.809311757901014 36.0 36.0 36.0 32.0 36.0 32 34.77006030626507 36.0 36.0 36.0 32.0 36.0 33 34.7398965297988 36.0 36.0 36.0 32.0 36.0 34 34.714411600763 36.0 36.0 36.0 32.0 36.0 35 34.682967191487094 36.0 36.0 36.0 32.0 36.0 36 34.654150712443034 36.0 36.0 36.0 32.0 36.0 37 34.63911588158348 36.0 36.0 36.0 32.0 36.0 38 34.58928044233931 36.0 36.0 36.0 32.0 36.0 39 34.554384038587045 36.0 36.0 36.0 32.0 36.0 40 34.539987283304995 36.0 36.0 36.0 32.0 36.0 41 34.50965264375608 36.0 36.0 36.0 32.0 36.0 42 34.46730100753198 36.0 36.0 36.0 32.0 36.0 43 34.451052768682196 36.0 36.0 36.0 32.0 36.0 44 34.4063247350922 36.0 36.0 36.0 32.0 36.0 45 34.342097582427435 36.0 36.0 36.0 32.0 36.0 46 34.33705291993804 36.0 36.0 36.0 32.0 36.0 47 34.296205439048094 36.0 36.0 36.0 32.0 36.0 48 34.245824358353104 36.0 36.0 36.0 32.0 36.0 49 34.23019178680769 36.0 36.0 36.0 32.0 36.0 50 33.70650428138069 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 6.0 21 31.0 22 130.0 23 399.0 24 1163.0 25 2706.0 26 6025.0 27 11673.0 28 19199.0 29 29913.0 30 43379.0 31 61589.0 32 90314.0 33 144770.0 34 306826.0 35 1066929.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.648260985278256 17.788852936644677 11.415444523819529 26.14744155425754 2 15.973848446481192 20.383533709061165 36.94181447411176 26.700803370345888 3 19.302327275049592 24.08970285969741 28.056484723948756 28.551485141304244 4 12.37218859730697 15.308405581462054 35.68977262287037 36.62963319836061 5 14.296758363187688 36.762844842315786 33.17169498979023 15.768701804706298 6 34.630327088693825 35.057317690082805 16.601598497746004 13.710756723477369 7 30.276899186243106 30.30104411407162 20.529575015657787 18.892481684027487 8 28.27319046191854 32.982905288632566 19.45200568049724 19.291898568951655 9 27.204203792040023 14.346336667497638 18.804406586911888 39.645052953550454 10 16.157485343588853 26.571170075992057 31.254050995627587 26.017293584791506 11 37.73396337927963 21.112402699076497 22.004476052558605 19.14915786908527 12 24.89895269333438 23.665825422746078 28.632619162994978 22.802602720924565 13 29.716171210410884 19.337555425463083 25.557867964852626 25.388405399273413 14 23.352165619546735 19.99081260801488 25.04835985445827 31.60866191798012 15 25.116256922055623 27.54363310934397 22.691625748226247 24.64848422037416 16 25.63534456921495 25.86340476904073 24.480422171865854 24.02082848987846 17 23.708121038287334 26.065639434079063 25.693550058681662 24.532689468951936 18 24.79268145799429 24.621034085784473 27.281400292988174 23.304884163233066 19 25.200680091089627 25.331320323463423 25.591368333188612 23.876631252258335 20 25.36196363697477 24.279139858435734 25.939144732235142 24.419751772354353 21 26.274316477643545 24.498404811056243 24.67027626599741 24.557002445302807 22 25.24986625061973 24.942256681166686 25.418096361176545 24.389780707037037 23 23.803020075011695 24.636831918344253 25.964802204974074 25.59534580166998 24 24.358297083283148 25.427843959990028 25.7758444417679 24.438014514958923 25 24.731114727557415 24.733523616919367 25.699152126965274 24.836209528557944 26 23.65159616930571 25.902619247026003 26.42198699759951 24.023797586068778 27 24.86573242841257 25.116761108201146 25.785816123312728 24.231690340073555 28 24.002957892053747 25.02197411284246 26.166084518404194 24.8089834766996 29 23.779155264123514 25.14594788395876 26.26148774127408 24.81340911064365 30 24.020548386464284 25.367453663892707 26.464674757920626 24.147323191722382 31 24.355047883678655 25.217430275257623 25.379049945239785 25.048471895823937 32 24.04962312085622 25.405827831635442 25.427115691113162 25.117433356395182 33 23.731817787127007 24.94494567394282 26.147205548288426 25.176030990641745 34 24.486976591757678 25.317651276851414 26.336555456274457 23.858816675116454 35 25.252387181347352 25.100459089495843 26.013540199041486 23.63361353011532 36 23.793664620978063 25.800045376753094 25.688676259274924 24.717613742993912 37 24.91290184336057 25.54313452526673 25.4225219951206 24.121441636252104 38 24.106652175983374 25.285663466951995 25.733828929640822 24.873855427423806 39 24.793745850968175 24.877496771808154 25.465321796807384 24.86343558041629 40 25.277260364526583 25.133063126906453 25.690132797028664 23.8995437115383 41 23.762517121321192 25.416247678642957 26.643660839581973 24.177574360453878 42 25.381402813918896 26.041774623190882 25.56806372912879 23.008758833761426 43 24.208105632599555 24.654646495486134 26.013652240407158 25.12359563150715 44 23.70795297623883 25.466834355243957 25.91556002476114 24.909652643756075 45 24.020548386464284 25.61657764046486 25.769570125290258 24.5933038477806 46 23.728427111127793 24.979314339686272 26.0594503356483 25.232808213537638 47 24.389500603622857 24.83021531549448 26.27722955315102 24.50305452773164 48 24.717725784359583 25.95197346860461 24.979902580032547 24.350398167003256 49 23.73954864135839 25.714333732013863 25.778365372495525 24.767752254132226 50 23.68420020671632 26.347423468744662 24.981919324614648 24.98645699992437 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11.0 1 22.0 2 33.0 3 112.0 4 191.0 5 234.5 6 278.0 7 275.0 8 272.0 9 389.5 10 507.0 11 785.5 12 1064.0 13 1876.5 14 2689.0 15 3947.5 16 5206.0 17 6168.0 18 7130.0 19 7696.5 20 8263.0 21 9305.0 22 10347.0 23 11203.5 24 12060.0 25 12876.5 26 13693.0 27 17016.5 28 20340.0 29 23811.5 30 27283.0 31 30265.5 32 33248.0 33 38428.0 34 43608.0 35 49978.0 36 56348.0 37 64687.5 38 73027.0 39 76612.0 40 80197.0 41 85220.5 42 90244.0 43 92047.5 44 93851.0 45 105137.0 46 116423.0 47 124771.0 48 133119.0 49 135572.5 50 138026.0 51 128595.5 52 119165.0 53 116525.5 54 113886.0 55 116493.0 56 119100.0 57 115732.5 58 112365.0 59 103603.0 60 94841.0 61 83607.5 62 72374.0 63 62921.0 64 53468.0 65 46238.0 66 39008.0 67 34008.5 68 29009.0 69 26609.5 70 24210.0 71 18686.0 72 13162.0 73 11981.0 74 10800.0 75 7880.0 76 4960.0 77 4429.5 78 3899.0 79 3417.0 80 2935.0 81 2381.0 82 1827.0 83 1538.5 84 1250.0 85 1034.5 86 819.0 87 587.5 88 356.0 89 223.5 90 91.0 91 64.0 92 37.0 93 28.0 94 19.0 95 12.0 96 5.0 97 5.0 98 5.0 99 5.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015685791194108865 2 0.004201551212707731 3 3.361240970166185E-4 4 1.6806204850830926E-4 5 0.0 6 2.2408273134441237E-4 7 5.602068283610309E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.1204136567220619E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1785055.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.230531507253765 #Duplication Level Percentage of deduplicated Percentage of total 1 76.29917336625073 39.851463784833754 2 14.307229259505288 14.945483772401879 3 4.4491816946631495 6.971493740538009 4 1.8272306883752378 3.8174892016081534 5 0.946380143763136 2.4714968958329906 6 0.5239657159961635 1.6420204702835037 7 0.330746444504953 1.2092543813439671 8 0.20711151793093746 0.8654035730245585 9 0.1567051606784567 0.7366314448948855 >10 0.7684584877217447 7.350701052535403 >50 0.08238967792445463 3.038129846068779 >100 0.08518707189149832 9.559027011928388 >500 0.011831025081998145 4.139809644657447 >1k 0.004409745712381127 3.401595180048278 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2922 0.16369243524709323 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2444 0.13691454885143595 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2412 0.13512188700068065 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2363 0.1323768735417116 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2094 0.11730730985879986 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1941 0.10873614538487608 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1878 0.1052068423662016 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1850 0.10363826324679072 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1825 0.10223774617588814 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 5.6020682836103086E-5 6 0.0 0.0 0.0 0.0 5.6020682836103086E-5 7 0.0 0.0 0.0 0.0 5.6020682836103086E-5 8 0.0 0.0 0.0 0.0 5.6020682836103086E-5 9 0.0 0.0 0.0 5.6020682836103086E-5 5.6020682836103086E-5 10 0.0 0.0 0.0 5.6020682836103086E-5 5.6020682836103086E-5 11 0.0 0.0 0.0 5.6020682836103086E-5 5.6020682836103086E-5 12 0.0 0.0 0.0 5.6020682836103086E-5 2.2408273134441234E-4 13 0.0 0.0 0.0 1.1204136567220617E-4 2.2408273134441234E-4 14 0.0 0.0 0.0 1.6806204850830926E-4 2.2408273134441234E-4 15 0.0 0.0 0.0 1.6806204850830926E-4 3.361240970166185E-4 16 0.0 0.0 0.0 2.2408273134441234E-4 3.361240970166185E-4 17 0.0 0.0 0.0 2.8010341418051543E-4 3.361240970166185E-4 18 0.0 0.0 0.0 2.8010341418051543E-4 3.361240970166185E-4 19 0.0 0.0 0.0 2.8010341418051543E-4 3.361240970166185E-4 20 0.0 0.0 0.0 3.921447798527216E-4 3.361240970166185E-4 21 0.0 0.0 0.0 5.602068283610309E-4 3.921447798527216E-4 22 0.0 0.0 0.0 8.963309253776494E-4 4.481654626888247E-4 23 0.0 0.0 0.0 0.0020167445820997113 4.481654626888247E-4 24 0.0 0.0 0.0 0.003753385750018907 4.481654626888247E-4 25 0.0 0.0 0.0 0.004481654626888247 4.481654626888247E-4 26 0.0 0.0 0.0 0.005714109649282515 4.481654626888247E-4 27 0.0 0.0 0.0 0.007562792182873917 5.041861455249278E-4 28 0.0 0.0 0.0 0.012828736369467608 5.041861455249278E-4 29 0.0 0.0 0.0 0.022800417914293956 5.602068283610309E-4 30 0.0 0.0 0.0 0.047057373582326596 5.602068283610309E-4 31 0.0 0.0 0.0 0.09221004394822568 5.602068283610309E-4 32 0.0 0.0 0.0 0.146718168347754 6.16227511197134E-4 33 0.0 0.0 0.0 0.20453151303461237 6.16227511197134E-4 34 0.0 0.0 0.0 0.27114010492673896 6.72248194033237E-4 35 0.0 0.0 0.0 0.34878477133757785 6.72248194033237E-4 36 0.0 0.0 0.0 0.4569607098940929 6.72248194033237E-4 37 0.0 0.0 0.0 0.6182442557792337 6.72248194033237E-4 38 0.0 0.0 0.0 0.8307307057765727 6.72248194033237E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 55 0.0044845673 19.999897 5 GTCCTAC 990 0.0 19.114225 1 TGTAGGA 1020 0.0 18.98136 2 TAGGACG 655 0.0 18.809065 4 GTAGGAC 1070 0.0 18.093365 3 GGACCGT 135 5.5302735E-8 17.925833 6 CTAGCGG 725 0.0 17.903358 29 GTAAACG 460 0.0 17.695562 27 CGCAATA 760 0.0 17.368334 36 TAGCGGC 750 0.0 17.306578 30 TCCTACA 1075 0.0 17.191572 2 CTGTAGG 1040 0.0 17.137407 1 TAGAACG 90 2.2162024E-4 17.111025 4 GATATAC 440 0.0 17.002771 1 TCTAGCG 770 0.0 16.857058 28 TAAACGC 470 0.0 16.850979 28 AGGACGT 705 0.0 16.850977 5 TAATACT 380 0.0 16.789389 4 ACGATTA 145 1.2502642E-7 16.68957 32 GTCCTAT 715 0.0 16.618092 1 >>END_MODULE