##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062509_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 92100 Sequences flagged as poor quality 0 Sequence length 25 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.651205211726385 32.0 32.0 32.0 32.0 32.0 2 30.813355048859936 32.0 32.0 32.0 32.0 32.0 3 30.8571444082519 32.0 32.0 32.0 32.0 32.0 4 30.685407166123778 32.0 32.0 32.0 32.0 32.0 5 30.84685124864278 32.0 32.0 32.0 32.0 32.0 6 34.30960912052117 36.0 36.0 36.0 32.0 36.0 7 33.99219326818675 36.0 36.0 36.0 32.0 36.0 8 34.01042345276873 36.0 36.0 36.0 32.0 36.0 9 33.89833876221498 36.0 36.0 36.0 32.0 36.0 10 34.03377850162867 36.0 36.0 36.0 32.0 36.0 11 34.18499457111835 36.0 36.0 36.0 32.0 36.0 12 34.105070575461454 36.0 36.0 36.0 32.0 36.0 13 34.02170466883822 36.0 36.0 36.0 32.0 36.0 14 33.95264929424538 36.0 36.0 36.0 32.0 36.0 15 34.053344191096635 36.0 36.0 36.0 32.0 36.0 16 33.89301845819761 36.0 36.0 36.0 32.0 36.0 17 33.781704668838216 36.0 36.0 36.0 32.0 36.0 18 33.782062975027145 36.0 36.0 36.0 32.0 36.0 19 33.74870792616721 36.0 36.0 36.0 32.0 36.0 20 33.722356134636264 36.0 36.0 36.0 27.0 36.0 21 33.35619978284473 36.0 36.0 36.0 21.0 36.0 22 33.27852334419109 36.0 36.0 36.0 21.0 36.0 23 32.97792616720955 36.0 36.0 36.0 14.0 36.0 24 32.96634093376765 36.0 36.0 36.0 14.0 36.0 25 32.03638436482085 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 0.0 4 2.0 5 10.0 6 18.0 7 7.0 8 29.0 9 19.0 10 14.0 11 2.0 12 7.0 13 2.0 14 35.0 15 55.0 16 63.0 17 83.0 18 135.0 19 189.0 20 255.0 21 346.0 22 526.0 23 677.0 24 808.0 25 957.0 26 1149.0 27 1509.0 28 1980.0 29 2657.0 30 3529.0 31 5030.0 32 7369.0 33 10024.0 34 20067.0 35 34546.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.878382487078134 14.295487121574077 15.294488120575078 20.531642270772704 2 8.05898193189715 25.280142460041695 36.08408617095205 30.576789437109102 3 21.867636679515716 32.78896791356751 25.244584396547044 20.098811010369726 4 12.883189088816255 20.19350845377841 29.70387342679365 37.21942903061169 5 10.414268025112419 40.45575999826212 33.959333521604066 15.170638455021399 6 32.023424089002845 27.0267921166424 22.68095000108646 18.268833793268293 7 24.401191097200485 33.170318205529476 24.503347243957574 17.92514345331247 8 33.19889989238078 27.310280353512844 25.308997619332324 14.181822134774055 9 27.816974137649886 19.808233772163458 16.632785067455185 35.74200702273148 10 16.41748850156031 30.08839935195555 33.51672846285162 19.977383683632528 11 32.80488865692415 24.733602992345162 14.668145441892833 27.793362908837853 12 18.89802309649638 26.948087253430764 30.626780626780626 23.52710902329223 13 37.15829763173347 22.223430398190636 22.45286301459235 18.165408955483546 14 29.3387845640284 17.289897463220502 23.27682755771092 30.094490415040177 15 30.03533568904594 19.573797227507477 35.43462897526502 14.956238108181571 16 27.64761521651681 23.680405309907695 30.298220245925698 18.37375922764979 17 24.045884527563334 23.24127432858541 34.268783298901816 18.44405784494944 18 29.87592026708135 17.064497536892244 36.203877899453005 16.8557042965734 19 19.24185252443971 40.71073607290047 24.899685736344754 15.147725666315068 20 19.4419373430041 18.50240862974522 44.392731701482155 17.66292232576853 21 19.990213136146153 32.32057416267943 20.14680295780774 27.54240974336668 22 17.390500429623344 32.62962117009822 24.868121947770852 25.11175645250759 23 16.518400904819906 29.99717243779363 23.020706455542022 30.463720201844442 24 15.073245532946897 38.01372470119955 24.244434535785363 22.66859523006819 25 27.67368775894129 24.482117419340806 19.43650025554311 28.40769456617479 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 54.0 1 54.0 2 122.5 3 191.0 4 191.0 5 191.0 6 621.5 7 1052.0 8 1052.0 9 1052.0 10 971.0 11 890.0 12 890.0 13 890.0 14 551.0 15 212.0 16 212.0 17 212.0 18 390.0 19 568.0 20 568.0 21 568.0 22 814.5 23 1061.0 24 1061.0 25 1061.0 26 1504.5 27 1948.0 28 1948.0 29 1948.0 30 2191.5 31 2435.0 32 2435.0 33 2435.0 34 2548.5 35 2662.0 36 2662.0 37 2662.0 38 3221.5 39 3781.0 40 3781.0 41 3781.0 42 7631.0 43 11481.0 44 11481.0 45 11481.0 46 26054.5 47 40628.0 48 40628.0 49 40628.0 50 28199.0 51 15770.0 52 15770.0 53 15770.0 54 9737.0 55 3704.0 56 3704.0 57 3704.0 58 2884.0 59 2064.0 60 2064.0 61 2064.0 62 1782.0 63 1500.0 64 1500.0 65 1500.0 66 1244.5 67 989.0 68 989.0 69 989.0 70 763.5 71 538.0 72 538.0 73 538.0 74 420.0 75 302.0 76 302.0 77 302.0 78 224.5 79 147.0 80 147.0 81 147.0 82 94.0 83 41.0 84 41.0 85 41.0 86 27.0 87 13.0 88 13.0 89 13.0 90 9.0 91 5.0 92 5.0 93 5.0 94 5.5 95 6.0 96 6.0 97 6.0 98 32.0 99 58.0 100 58.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008686210640608035 2 0.004343105320304018 3 0.005428881650380022 4 0.011943539630836048 5 0.03691639522258414 6 0.06297502714440825 7 0.09120521172638436 8 0.11834961997828448 9 0.12269272529858849 10 0.14223669923995658 11 0.14332247557003258 12 0.14983713355048858 13 0.1454940282301846 14 0.1444082519001086 15 0.13572204125950055 16 0.13137893593919653 17 0.14115092290988057 18 0.15526601520086863 19 0.15092290988056462 20 0.15092290988056462 21 0.15200868621064062 22 0.1726384364820847 23 0.16069489685124863 24 0.16178067318132466 25 0.15092290988056462 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 92100.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.22909880564604 #Duplication Level Percentage of deduplicated Percentage of total 1 79.81178579430876 19.337676438653638 2 11.059825229666144 5.359391965255157 3 3.1369034281873183 2.2801302931596092 4 1.541563970423482 1.494028230184582 5 0.8290387631637912 1.004343105320304 6 0.5780864889088058 0.8403908794788273 7 0.4346851893345284 0.7372421281216069 8 0.33609679587721264 0.6514657980456027 9 0.2106206587497199 0.4592833876221498 >10 1.5370826798117858 7.1368078175895775 >50 0.19717678691463142 3.3257328990228014 >100 0.2151019493614161 12.914223669923997 >500 0.0582567779520502 9.666666666666666 >1k 0.04481290611696168 19.829533116178066 >5k 0.008962581223392337 14.963083604777417 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 7392 8.026058631921824 No Hit TCCATGTACTCTGCGTTGATACCAC 6389 6.937024972855592 No Hit GAGTACATGGAAGCAGTGGTATCAA 3122 3.3897937024972853 No Hit CATGTACTCTGCGTTGATACCACTG 2792 3.031487513572204 No Hit GCTTCCATGTACTCTGCGTTGATAC 2063 2.239956568946797 No Hit CCCATGTACTCTGCGTTGATACCAC 1859 2.018458197611292 No Hit CATGGAAGCAGTGGTATCAACGCAG 1744 1.8935939196525517 No Hit GCGTTGATACCACTGCTTCCATGTA 1596 1.732899022801303 No Hit GTACATGGGAAGCAGTGGTATCAAC 1589 1.7252985884907708 No Hit GTATCAACGCAGAGTACATGGAAGC 1296 1.4071661237785016 No Hit ACTCTGCGTTGATACCACTGCTTCC 1159 1.2584147665580891 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1043 1.1324647122692726 No Hit CAGTGGTATCAACGCAGAGTACATG 982 1.0662323561346363 No Hit GTATCAACGCAGAGTACTTTTTTTT 900 0.9771986970684038 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 893 0.9695982627578719 No Hit TATCAACGCAGAGTACATGGAAGCA 869 0.9435396308360479 No Hit TATCAACGCAGAGTACTTTTTTTTT 674 0.7318132464712269 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 671 0.7285559174809989 No Hit GTATCAACGCAGAGTACATGGGAAG 610 0.6623235613463626 No Hit GGTATCAACGCAGAGTACATGGAAG 610 0.6623235613463626 No Hit AAGCAGTGGTATCAACGCAGAGTAC 580 0.6297502714440825 No Hit ATACCACTGCTTCCATGTACTCTGC 539 0.5852334419109664 No Hit GAGTACATGGGAAGCAGTGGTATCA 532 0.5776330076004343 No Hit GTACATGGGGTGGTATCAACGCAAA 530 0.5754614549402822 No Hit GCGTTGATACCACTGCTTCCCATGT 513 0.5570032573289903 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 478 0.5190010857763301 No Hit CCACTGCTTCCATGTACTCTGCGTT 456 0.495114006514658 No Hit GTACTCTGCGTTGATACCACTGCTT 452 0.49077090119435396 No Hit GTGGTATCAACGCAGAGTACATGGA 440 0.47774158523344196 No Hit GCTTCCCATGTACTCTGCGTTGATA 439 0.47665580890336584 No Hit GAAGCAGTGGTATCAACGCAGAGTA 426 0.46254071661237783 No Hit ACATGGAAGCAGTGGTATCAACGCA 419 0.4549402823018458 No Hit CTGCTTCCATGTACTCTGCGTTGAT 392 0.4256243213897937 No Hit AAAAAGTACTCTGCGTTGATACCAC 380 0.4125950054288816 No Hit TATCAACGCAGAGTACATGGGAAGC 363 0.3941368078175896 No Hit TGGAAGCAGTGGTATCAACGCAGAG 360 0.39087947882736157 No Hit GTTGATACCACTGCTTCCATGTACT 353 0.38327904451682954 No Hit GGTATCAACGCAGAGTACTTTTTTT 340 0.3691639522258415 No Hit ACGCAGAGTACATGGGAAGCAGTGG 334 0.36264929424538545 No Hit GTACATGGGTGGTATCAACGCAAAA 333 0.36156351791530944 No Hit GATACCACTGCTTCCATGTACTCTG 325 0.3528773072747014 No Hit GGTATCAACGCAGAGTACATGGGAA 318 0.3452768729641694 No Hit CCCCATGTACTCTGCGTTGATACCA 309 0.3355048859934854 No Hit GCAGTGGTATCAACGCAGAGTACAT 286 0.31053203040173727 No Hit CTTCCATGTACTCTGCGTTGATACC 275 0.2985884907709012 No Hit GCAGAGTACATGGAAGCAGTGGTAT 267 0.2899022801302932 No Hit GTACATGGGAGTGGTATCAACGCAA 241 0.26167209554831705 No Hit CCATGTACTCTGCGTTGATACCACT 237 0.25732899022801303 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 213 0.23127035830618892 No Hit TCCATGTACTCTGCGTTGATACCAA 212 0.2301845819761129 No Hit CTGCTTCCCATGTACTCTGCGTTGA 194 0.21064060803474483 No Hit GTGGTATCAACGCAGAGTACATGGG 192 0.20846905537459282 No Hit CACTGCTTCCATGTACTCTGCGTTG 187 0.20304017372421282 No Hit TGATACCACTGCTTCCATGTACTCT 186 0.20195439739413681 No Hit ATCAACGCAGAGTACATGGAAGCAG 183 0.19869706840390877 No Hit GTATCAACGCAGAGTACATGGGGTG 174 0.18892508143322476 No Hit AAAGTACTCTGCGTTGATACCACTG 172 0.18675352877307275 No Hit GATACCACTGCTTCCCATGTACTCT 170 0.18458197611292074 No Hit GTACATGGAAGCAGTGGTATCAACC 160 0.17372421281216072 No Hit CTGCGTTGATACCACTGCTTCCATG 148 0.16069489685124863 No Hit CTCTGCGTTGATACCACTGCTTCCA 135 0.1465798045602606 No Hit TCCATGTACTCTGCGTTGATACAAC 125 0.13572204125950055 No Hit TATCAACGCAGAGTACATGGGGTGG 122 0.13246471226927253 No Hit ATACCACTGCTTCCCATGTACTCTG 121 0.13137893593919653 No Hit GTATCAACGCAGAGTACATGGAATC 119 0.12920738327904452 No Hit GAGTACATGGGGTGGTATCAACGCA 114 0.1237785016286645 No Hit CATGGGAAGCAGTGGTATCAACGCA 113 0.12269272529858849 No Hit TACCACTGCTTCCATGTACTCTGCG 108 0.11726384364820848 No Hit GTATCAACGCAGAGTACATGGGAGT 108 0.11726384364820848 No Hit GCAGAGTACATGGGAAGCAGTGGTA 106 0.11509229098805646 No Hit GTACATGGAAGCAGTGGTATCAAAG 104 0.11292073832790445 No Hit ATCAACGCAGAGTACTTTTTTTTTT 104 0.11292073832790445 No Hit AGTGGTATCAACGCAGAGTACATGG 101 0.10966340933767645 No Hit GTATCAACGCAGAGTACATGGGCAG 99 0.10749185667752444 No Hit TCCATGTACTCTGCGTTGATACAAA 95 0.1031487513572204 No Hit TACCACTGCTTCCCATGTACTCTGC 94 0.1020629750271444 No Hit ACGCAGAGTACATGGGGTGGTATCA 93 0.10097719869706841 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0010857763300760044 0.0 10 0.0 0.0 0.0 0.0010857763300760044 0.0 11 0.0 0.0 0.0 0.0010857763300760044 0.0 12 0.0 0.0 0.0 0.0010857763300760044 0.0 13 0.0 0.0 0.0 0.0010857763300760044 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGCAA 35 0.0021498122 16.285248 17 ATATGGC 40 0.005230314 14.249593 15 AAAAAGT 55 1.9292734E-4 13.817786 1 AAAAGTA 65 5.3460324E-5 13.15347 2 TGGGTGG 120 1.21001E-7 11.089043 6 CATGGGT 170 1.2732926E-10 10.617343 4 ATGGGTG 145 1.3622412E-8 10.482459 5 GGGAAGC 360 0.0 10.291372 7 TGGGGTG 175 2.3719622E-9 9.776462 6 GGGGTGG 175 2.39379E-9 9.771149 7 AAAGTAC 90 0.0010929859 9.499728 3 ATGGGAG 100 2.692905E-4 9.499727 5 AGTACTC 100 2.692905E-4 9.499727 5 TCCATGT 1420 0.0 9.29903 1 ACATGGA 1685 0.0 9.246027 3 TACATGG 2790 0.0 9.159236 2 ATGGGGT 210 6.1118044E-10 9.047359 5 TGATACC 1985 0.0 9.045081 17 AAGTACT 95 0.0017902353 8.9997425 4 GATACCA 1990 0.0 8.974618 18 >>END_MODULE