SRR4062506_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062506_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	550403
Sequences flagged as poor quality	0
Sequence length	25
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGAAGCAGTGGTATCAACG	1869	0.3395693700797416	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1614	0.2932396807430192	No Hit
TCCATGTACTCTGCGTTGATACCAC	1567	0.2847004831005645	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1342	0.24382134545051534	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1180	0.21438836634247996	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	986	0.17914146543532647	No Hit
GAGTACATGGAAGCAGTGGTATCAA	871	0.1582476839697458	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	761	0.13826232778527733	No Hit
CATGTACTCTGCGTTGATACCACTG	694	0.1260894290183738	No Hit
GGTATCAACGCAGAGTACTTTTTTT	639	0.11609675092613958	No Hit
GTCTTGCGCCGGTCCAAGAATTTCA	590	0.10719418317123998	No Hit
GAATAGGACCGCGGTTCTATTTTGT	584	0.10610407283390534	No Hit
GAATAACGCCGCCGCATCGCCAGTC	573	0.10410553721545848	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCGGC	35	0.0021767588	16.275667	2
CGGTCCA	100	4.0017767E-11	15.201673	10
GTACCGG	50	8.736773E-5	15.192004	1
GTGTTAA	45	6.7795056E-4	14.770004	1
ACGAACG	60	2.5574593E-5	14.252864	15
CGAACGA	60	2.5596537E-5	14.251569	16
AATTCCG	60	2.56185E-5	14.250274	5
GCCTTAT	40	0.005291813	14.242503	1
GGTTCTA	95	4.8548827E-9	14.004087	13
CGGTTCT	100	9.977157E-9	13.303884	12
TCGGAAT	50	0.0014982102	13.2990465	19
ACAATAC	50	0.0015043808	13.291796	3
TAACGAA	65	5.4251188E-5	13.157687	13
TCACTAC	65	5.429751E-5	13.15649	17
GATAACG	65	5.434387E-5	13.155294	11
CCGATAA	65	5.434387E-5	13.155294	9
CGATAAC	65	5.434387E-5	13.155294	10
AGCCTGT	60	4.0807677E-4	12.668061	6
GGTTAAT	90	5.4181874E-7	12.660004	1
CTATTTT	130	1.9645086E-10	12.425574	17