##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062505_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1303392 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.173959177285113 32.0 32.0 32.0 32.0 32.0 2 31.34389270457391 32.0 32.0 32.0 32.0 32.0 3 31.452441015442783 32.0 32.0 32.0 32.0 32.0 4 31.580408656797033 32.0 32.0 32.0 32.0 32.0 5 31.48720645822592 32.0 32.0 32.0 32.0 32.0 6 35.07821975276816 36.0 36.0 36.0 36.0 36.0 7 35.095672675603346 36.0 36.0 36.0 36.0 36.0 8 35.03030861014952 36.0 36.0 36.0 36.0 36.0 9 35.17779225282954 36.0 36.0 36.0 36.0 36.0 10 35.03046665930127 36.0 36.0 36.0 36.0 36.0 11 35.18111205224522 36.0 36.0 36.0 36.0 36.0 12 35.07097787925659 36.0 36.0 36.0 36.0 36.0 13 35.12215971864182 36.0 36.0 36.0 36.0 36.0 14 35.07797040337826 36.0 36.0 36.0 36.0 36.0 15 35.04225743291351 36.0 36.0 36.0 36.0 36.0 16 35.04673114458275 36.0 36.0 36.0 36.0 36.0 17 35.02462958189094 36.0 36.0 36.0 36.0 36.0 18 35.02906032874223 36.0 36.0 36.0 36.0 36.0 19 34.994558045469056 36.0 36.0 36.0 36.0 36.0 20 34.988984894797575 36.0 36.0 36.0 36.0 36.0 21 34.9659879759888 36.0 36.0 36.0 36.0 36.0 22 34.94212945913432 36.0 36.0 36.0 32.0 36.0 23 34.8905049286784 36.0 36.0 36.0 32.0 36.0 24 34.86527460656502 36.0 36.0 36.0 32.0 36.0 25 34.83847376690972 36.0 36.0 36.0 32.0 36.0 26 34.78240544671135 36.0 36.0 36.0 32.0 36.0 27 34.75900880164985 36.0 36.0 36.0 32.0 36.0 28 34.727062925044805 36.0 36.0 36.0 32.0 36.0 29 34.695329570842844 36.0 36.0 36.0 32.0 36.0 30 34.67950624217426 36.0 36.0 36.0 32.0 36.0 31 34.67280910117601 36.0 36.0 36.0 32.0 36.0 32 34.616529793032335 36.0 36.0 36.0 32.0 36.0 33 34.58305789816111 36.0 36.0 36.0 32.0 36.0 34 34.55319428076895 36.0 36.0 36.0 32.0 36.0 35 34.49814330608136 36.0 36.0 36.0 32.0 36.0 36 34.45786378925143 36.0 36.0 36.0 32.0 36.0 37 34.42341674645847 36.0 36.0 36.0 32.0 36.0 38 34.36527383933613 36.0 36.0 36.0 32.0 36.0 39 34.28868828410793 36.0 36.0 36.0 32.0 36.0 40 34.2322317460902 36.0 36.0 36.0 32.0 36.0 41 34.210210742432054 36.0 36.0 36.0 32.0 36.0 42 34.102151156367384 36.0 36.0 36.0 32.0 36.0 43 34.123391888242374 36.0 36.0 36.0 32.0 36.0 44 34.09393873830743 36.0 36.0 36.0 32.0 36.0 45 33.97380910731384 36.0 36.0 36.0 32.0 36.0 46 34.03871130097469 36.0 36.0 36.0 32.0 36.0 47 33.94790285654661 36.0 36.0 36.0 32.0 36.0 48 33.93973110161793 36.0 36.0 36.0 32.0 36.0 49 33.93680335616607 36.0 36.0 36.0 32.0 36.0 50 33.36556615354398 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 2.0 21 27.0 22 119.0 23 457.0 24 1156.0 25 2633.0 26 5728.0 27 10792.0 28 18070.0 29 26385.0 30 35960.0 31 49862.0 32 73181.0 33 110418.0 34 232819.0 35 735781.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.65585388705283 17.658460525578743 11.811441125036543 25.874244462331887 2 15.988310088034948 20.576654242234984 36.044764782337154 27.39027088739291 3 18.588194856300653 24.601478769446537 28.43458666345451 28.375739710798303 4 12.448624317068811 15.694316892347565 35.11146710613639 36.745591684447234 5 14.32723232918416 36.79975019027277 33.26973005818664 15.603287422356434 6 35.13934869589569 34.497635004238965 16.59954656528961 13.76346973457574 7 30.193142201271762 30.436660651592153 21.048771206206574 18.321425940929515 8 29.021583683189707 32.17312980285286 19.57377366133903 19.231512852618398 9 27.431348358743957 14.078266553730574 18.34275490412708 40.14763018339839 10 15.880103606589577 26.8629084726621 31.62087844639218 25.63610947435614 11 37.769220618202354 20.90261410228082 21.353744690776068 19.974420588740763 12 24.30957072009035 23.867723601188285 28.673568657779086 23.149137020942277 13 30.32395472735754 19.046227075200708 25.110864574893814 25.518953622547937 14 23.9804295254229 19.155940806756526 24.925425351697726 31.938204316122853 15 25.798761999459867 26.367738945766124 23.05998502369203 24.773514031081977 16 26.27406029805308 25.24781493211559 23.951044658859345 24.527080110971987 17 24.329288502614716 25.530462055927917 25.683524219881665 24.456725221575702 18 25.773520168913112 23.656121872775035 26.894978640347645 23.675379317964204 19 25.280422160025534 26.03836758243107 25.187280572536892 23.493929685006506 20 25.423356902604894 23.35782327956593 26.320477646019004 24.89834217181017 21 26.419526895976038 24.534138616778375 24.126663352237856 24.919671135007736 22 25.226179077361223 24.50621148510962 24.861285016326633 25.406324421202527 23 23.88207078146866 24.114387689965874 25.42865078195969 26.574890746605778 24 24.26775674547642 25.58800422282782 25.088691659915053 25.055547371780705 25 25.315944857725075 24.09321217254671 24.768757211951584 25.82208575777663 26 24.364274140089858 24.854226510520242 25.658435835113302 25.123063514276595 27 25.875791780216545 24.953122314698877 24.862666028332228 24.308419876752353 28 24.68067933515013 23.858363408705898 25.780041614495104 25.680915641648866 29 24.144156170975425 25.111555080896615 26.23493162456115 24.509357123566815 30 25.071045395399082 24.511428641575215 26.144168446637693 24.273357516388007 31 24.501991726203627 24.753719525668412 25.003912867349193 25.740375880778764 32 24.390896982642214 24.939388917532103 24.925885689032924 25.743828410792762 33 24.004060175296456 24.479511919668067 25.602044511551398 25.91438339348408 34 24.58485244653949 24.98964240995802 26.024404016596698 24.401101126905797 35 25.904332694998892 24.449436547101715 25.52348027301073 24.122750484888662 36 24.64316184233139 25.312492327711077 25.16886707912892 24.87547875082861 37 25.765464265547127 25.027313348555154 25.16740934423412 24.0398130416636 38 24.702775527239694 24.797835186958338 25.036443372369938 25.462945913432026 39 24.907472195624955 24.65259875770298 25.25241830546758 25.187510741204488 40 25.50537367115956 24.848318848051854 25.076646166310674 24.569661314477916 41 23.854603987135107 25.299065822101102 25.802598143919862 25.043732046843925 42 26.121458471434533 25.273747268665144 25.038975227713532 23.565819032186784 43 25.050483661093516 23.880075986349464 24.99424578331001 26.075194569247014 44 24.594289361911077 24.676459576244138 25.73439149542118 24.994859566423607 45 24.878547666396603 24.89619393091257 25.200093295033266 25.02516510765756 46 24.26081218975134 24.693913563860395 25.94449857678822 25.100775669600043 47 24.961638555400064 24.21297660258771 26.21521384203678 24.61017099997545 48 25.229324715818418 26.31587427266701 24.24259163781886 24.21220937369571 49 23.986797525226486 25.14554332081216 25.958192163217202 24.90946699074415 50 23.860588372492696 26.438247280940807 24.279188455967198 25.421975890599295 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 20.0 1 20.0 2 20.0 3 111.0 4 202.0 5 222.5 6 243.0 7 229.5 8 216.0 9 322.0 10 428.0 11 667.0 12 906.0 13 1570.5 14 2235.0 15 3154.5 16 4074.0 17 4838.5 18 5603.0 19 6130.0 20 6657.0 21 7244.5 22 7832.0 23 8176.5 24 8521.0 25 8592.0 26 8663.0 27 10118.5 28 11574.0 29 13084.5 30 14595.0 31 16382.0 32 18169.0 33 20887.0 34 23605.0 35 26897.5 36 30190.0 37 36466.5 38 42743.0 39 46781.5 40 50820.0 41 56782.5 42 62745.0 43 66377.0 44 70009.0 45 81152.5 46 92296.0 47 100943.0 48 109590.0 49 109212.5 50 108835.0 51 100921.5 52 93008.0 53 90578.0 54 88148.0 55 88983.0 56 89818.0 57 87518.0 58 85218.0 59 78165.0 60 71112.0 61 63055.0 62 54998.0 63 48157.5 64 41317.0 65 35369.0 66 29421.0 67 25408.0 68 21395.0 69 19730.5 70 18066.0 71 13968.5 72 9871.0 73 9056.0 74 8241.0 75 5968.0 76 3695.0 77 3378.0 78 3061.0 79 2579.5 80 2098.0 81 1680.5 82 1263.0 83 1086.0 84 909.0 85 729.5 86 550.0 87 409.5 88 269.0 89 184.5 90 100.0 91 62.5 92 25.0 93 16.0 94 7.0 95 8.0 96 9.0 97 4.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013886842945176893 2 0.003529252903194127 3 8.439517811985957E-4 4 2.30168667599617E-4 5 0.0 6 5.370602243991063E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.5344577839974466E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1303392.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.0627634438584 #Duplication Level Percentage of deduplicated Percentage of total 1 79.48561279948899 44.56183107567875 2 12.760785958020385 14.308098490444134 3 3.643586696424856 6.128086171465686 4 1.4643875438877234 3.28390449852441 5 0.7441320143833589 2.085904854668804 6 0.440588773616638 1.4820374514773558 7 0.268234180128714 1.0526564571679375 8 0.18684640172702371 0.8380100496286612 9 0.1361061495593802 0.6867438179401749 >10 0.6969387274155845 7.193997810393913 >50 0.07777521809613316 3.020037181852397 >100 0.08290644028614041 9.647794435044888 >500 0.009349302200382058 3.482807422525797 >1k 0.002749794764818252 2.2280902831872047 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3592 0.2755886180059414 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3127 0.23991247452800077 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1494 0.11462399646460927 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1440 0.11048096044781615 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1432 0.10986717733421718 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1401 0.10748876776902114 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1329 0.10196471974663034 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1312 0.1006604306302325 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 7.672288919987233E-5 6 0.0 0.0 0.0 0.0 7.672288919987233E-5 7 0.0 0.0 0.0 0.0 7.672288919987233E-5 8 0.0 0.0 0.0 0.0 7.672288919987233E-5 9 0.0 0.0 0.0 0.0 7.672288919987233E-5 10 0.0 0.0 0.0 7.672288919987233E-5 7.672288919987233E-5 11 0.0 0.0 0.0 7.672288919987233E-5 7.672288919987233E-5 12 0.0 0.0 0.0 7.672288919987233E-5 1.5344577839974466E-4 13 0.0 0.0 0.0 1.5344577839974466E-4 1.5344577839974466E-4 14 0.0 0.0 0.0 1.5344577839974466E-4 1.5344577839974466E-4 15 0.0 0.0 0.0 1.5344577839974466E-4 3.0689155679948933E-4 16 0.0 0.0 0.0 2.30168667599617E-4 3.836144459993617E-4 17 0.0 0.0 0.0 3.0689155679948933E-4 3.836144459993617E-4 18 0.0 0.0 0.0 3.0689155679948933E-4 3.836144459993617E-4 19 0.0 0.0 0.0 3.836144459993617E-4 3.836144459993617E-4 20 0.0 0.0 0.0 6.137831135989787E-4 5.370602243991063E-4 21 0.0 0.0 0.0 0.0010741204487982126 5.370602243991063E-4 22 0.0 0.0 0.0 0.0019947951191966805 6.137831135989787E-4 23 0.0 0.0 0.0 0.0030689155679948935 6.137831135989787E-4 24 0.0 0.0 0.0 0.005293879354791191 6.90506002798851E-4 25 0.0 0.0 0.0 0.0064447226927892756 6.90506002798851E-4 26 0.0 0.0 0.0 0.008976578036385062 6.90506002798851E-4 27 0.0 0.0 0.0 0.01281272249637868 6.90506002798851E-4 28 0.0 0.0 0.0 0.020254842748766298 7.672288919987234E-4 29 0.0 0.0 0.0 0.030535709901549187 7.672288919987234E-4 30 0.0 0.0 0.0 0.05270862488031229 7.672288919987234E-4 31 0.0 0.0 0.0 0.09713117772703837 7.672288919987234E-4 32 0.0 0.0 0.0 0.15881638064373574 8.439517811985956E-4 33 0.0 0.0 0.0 0.2119086199700474 8.439517811985956E-4 34 0.0 0.0 0.0 0.2796549311335347 9.20674670398468E-4 35 0.0 0.0 0.0 0.34908914585941914 9.20674670398468E-4 36 0.0 0.0 0.0 0.4539693353956446 9.20674670398468E-4 37 0.0 0.0 0.0 0.6103305835849844 9.20674670398468E-4 38 0.0 0.0 0.0 0.7910897105398836 9.973975595983402E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACTAAG 55 0.0044838646 19.999949 2 GTATTAG 315 0.0 18.859262 1 CGCAATA 410 0.0 18.78044 36 TTAACGG 130 3.5879566E-8 18.615337 35 TATGCGT 95 1.5973015E-5 18.526268 39 TATTAGA 215 0.0 17.395304 2 GGTAAAC 165 1.6589183E-9 17.333288 35 CGAGCCG 495 0.0 17.333288 15 CGCGGTT 590 0.0 17.152498 10 CGAATGC 475 0.0 17.136797 43 GTCCTAT 445 0.0 16.810879 1 TAGGACC 790 0.0 16.708817 4 CTATTCC 475 0.0 16.673641 4 ATACGAA 490 0.0 16.6122 40 CAATACG 465 0.0 16.559097 38 TACGAAT 505 0.0 16.554413 41 GTTTTCG 615 0.0 16.455242 28 TAACGGC 135 1.0856329E-6 16.296253 36 GACCGCG 685 0.0 16.058352 7 CGCTAGA 510 0.0 15.960742 37 >>END_MODULE