##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062504_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 700002 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.197565149813858 32.0 32.0 32.0 32.0 32.0 2 31.399168859517545 32.0 32.0 32.0 32.0 32.0 3 31.49780286342039 32.0 32.0 32.0 32.0 32.0 4 31.608701117996805 32.0 32.0 32.0 32.0 32.0 5 31.538168462375822 32.0 32.0 32.0 32.0 32.0 6 35.12840963311533 36.0 36.0 36.0 36.0 36.0 7 35.14120102513993 36.0 36.0 36.0 36.0 36.0 8 35.081545481298626 36.0 36.0 36.0 36.0 36.0 9 35.206172268079236 36.0 36.0 36.0 36.0 36.0 10 35.09319401944566 36.0 36.0 36.0 36.0 36.0 11 35.22787934891615 36.0 36.0 36.0 36.0 36.0 12 35.12872106079697 36.0 36.0 36.0 36.0 36.0 13 35.15529241345025 36.0 36.0 36.0 36.0 36.0 14 35.125945354441846 36.0 36.0 36.0 36.0 36.0 15 35.095168299519145 36.0 36.0 36.0 36.0 36.0 16 35.09923828789061 36.0 36.0 36.0 36.0 36.0 17 35.07366836094754 36.0 36.0 36.0 36.0 36.0 18 35.08052691278025 36.0 36.0 36.0 36.0 36.0 19 35.05826697638007 36.0 36.0 36.0 36.0 36.0 20 35.03734417901663 36.0 36.0 36.0 36.0 36.0 21 35.01384710329399 36.0 36.0 36.0 36.0 36.0 22 34.980741483595764 36.0 36.0 36.0 36.0 36.0 23 34.94390301741995 36.0 36.0 36.0 32.0 36.0 24 34.91055454127274 36.0 36.0 36.0 32.0 36.0 25 34.88636889608887 36.0 36.0 36.0 32.0 36.0 26 34.83282333479047 36.0 36.0 36.0 32.0 36.0 27 34.80124342501878 36.0 36.0 36.0 32.0 36.0 28 34.772286364896104 36.0 36.0 36.0 32.0 36.0 29 34.73032505621413 36.0 36.0 36.0 32.0 36.0 30 34.71151225282213 36.0 36.0 36.0 32.0 36.0 31 34.694395158870975 36.0 36.0 36.0 32.0 36.0 32 34.65104385416042 36.0 36.0 36.0 32.0 36.0 33 34.61910823111934 36.0 36.0 36.0 32.0 36.0 34 34.583771189225175 36.0 36.0 36.0 32.0 36.0 35 34.51489281459196 36.0 36.0 36.0 32.0 36.0 36 34.490797169150945 36.0 36.0 36.0 32.0 36.0 37 34.441253024991354 36.0 36.0 36.0 32.0 36.0 38 34.39126173925217 36.0 36.0 36.0 32.0 36.0 39 34.296707723692215 36.0 36.0 36.0 32.0 36.0 40 34.24434930185914 36.0 36.0 36.0 32.0 36.0 41 34.22344079016917 36.0 36.0 36.0 32.0 36.0 42 34.11568824089074 36.0 36.0 36.0 32.0 36.0 43 34.138931031625624 36.0 36.0 36.0 32.0 36.0 44 34.093828303347706 36.0 36.0 36.0 32.0 36.0 45 33.976070068371236 36.0 36.0 36.0 32.0 36.0 46 34.026388496032865 36.0 36.0 36.0 32.0 36.0 47 33.942903020277086 36.0 36.0 36.0 32.0 36.0 48 33.92161879537487 36.0 36.0 36.0 32.0 36.0 49 33.925383070334085 36.0 36.0 36.0 32.0 36.0 50 33.36362896106011 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 2.0 21 22.0 22 76.0 23 205.0 24 572.0 25 1425.0 26 3078.0 27 5816.0 28 9608.0 29 13909.0 30 19103.0 31 26273.0 32 38125.0 33 56391.0 34 118722.0 35 406672.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.60486854193784 17.82631618803768 11.767571915797113 25.80124335422736 2 15.403956707087099 20.848000502874385 37.37056699086826 26.37747579917026 3 18.66524951571152 24.966856953468305 28.802021725838433 27.565871804981747 4 12.0362685196164 16.036834233093952 36.0952341496655 35.831663097624144 5 13.607389693172307 37.49689286602038 33.78947488721461 15.106242553592706 6 33.8862396749705 35.393386838248105 17.201334860956745 13.519038625824646 7 29.37620178228062 30.942768734946473 21.3005105699698 18.380518912803108 8 28.23606218267948 33.062048394147446 20.07208550832712 18.629803914845958 9 27.25606498267148 14.222102222565077 18.806660552398423 39.71517224236502 10 15.550669855228985 27.094208302261997 32.35276470638656 25.002357136122466 11 37.1764652100994 21.18408233119334 22.12079394058874 19.51865851811852 12 24.092502592849733 24.054359844686157 29.468630089628316 22.38450747283579 13 30.271199225145075 19.683372333221904 25.401213139391032 24.644215302241992 14 23.39136173896646 19.853371847509006 25.478784346330443 31.276482067194095 15 25.124785357756117 27.563635532469906 23.5459327259065 23.765646383867477 16 25.469070088371176 25.70935511612824 25.159213830817627 23.662360964682957 17 23.36750466427239 26.178210919397372 26.604781129196773 23.849503287133466 18 24.82878620346799 24.367501807137693 28.178490918597376 22.62522107079694 19 24.8833574761215 26.224353644703875 25.8229262202108 23.069362658963833 20 24.93078591204025 24.083788332033336 27.260064971242937 23.72536078468347 21 25.88278319204802 24.85350041857023 24.664500958568688 24.599215430813054 22 24.586644038159893 25.57321264796386 25.52049851286139 24.319644801014853 23 23.15821954794415 24.914643101019713 26.089639743886444 25.837497607149697 24 23.665360956111552 26.177210922254506 26.010211399396 24.147216722237935 25 24.62935820183371 24.833500475712928 25.631355338984747 24.90578598346862 26 23.233790760597827 25.746926437353036 26.596209725115074 24.423073076934067 27 24.924500215713667 25.64735529327059 25.822211936537325 23.605932554478414 28 23.68450375856069 24.774500644283872 26.428067348379003 25.112928248776434 29 23.283933474475788 25.756926408781688 26.845637583892618 24.113502532849907 30 24.282502049994143 25.28821346224725 26.788780603483993 23.640503884274615 31 23.894931728766487 25.294927728777918 25.70235513612818 25.10778540632741 32 23.509932828763347 25.787783463475815 25.920640226742208 24.781643481018627 33 23.284504901414568 25.126499638572465 26.441638738175033 25.147356721837937 34 23.580932625906783 25.880497484292903 27.058779832057624 23.47979005774269 35 25.018357090408312 25.327927634492475 26.40721026511353 23.246505009985686 36 23.701075139785317 26.055925554498415 26.20849654715272 24.034502758563548 37 24.924928785917754 25.799497715720815 25.781640623883934 23.4939328744775 38 23.911788823460505 25.665069528372776 25.690926597352583 24.73221505081414 39 24.231787909177402 25.326927637349606 26.041068454090134 24.40021599938286 40 25.058071262653534 25.337784749186433 25.816497667149523 23.78764632101051 41 23.311361967537238 25.793783446333013 26.77249493572876 24.122359650401 42 25.423641646738155 26.13592532592764 25.907783120619655 22.532649906714553 43 24.092074022645647 24.684215187956607 26.092782592049733 25.130928197348005 44 23.597646863866103 25.58021262796392 26.561781252053567 24.260359256116413 45 24.08393118876803 25.760212113679675 25.797640578169776 24.35821611938252 46 23.39479030059914 25.249213573675505 26.58735260756398 24.768643518161376 47 24.254930700198 24.920785940611598 26.882923191648022 23.941360167542378 48 24.24935928754489 26.823780503484272 25.079785486327182 23.84707472264365 49 23.370076085496898 25.629783914903097 26.783494904300277 24.216645095299725 50 23.218076519781373 27.25577926920209 24.749643572446935 24.776500638569605 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 16.0 1 15.0 2 14.0 3 64.5 4 115.0 5 131.5 6 148.0 7 160.0 8 172.0 9 222.0 10 272.0 11 374.5 12 477.0 13 864.0 14 1251.0 15 1828.5 16 2406.0 17 2769.0 18 3132.0 19 3554.0 20 3976.0 21 4342.5 22 4709.0 23 5002.5 24 5296.0 25 5510.0 26 5724.0 27 6867.0 28 8010.0 29 9527.5 30 11045.0 31 12547.5 32 14050.0 33 16407.5 34 18765.0 35 21371.5 36 23978.0 37 26820.0 38 29662.0 39 31191.5 40 32721.0 41 34886.5 42 37052.0 43 38120.5 44 39189.0 45 44187.5 46 49186.0 47 52957.0 48 56728.0 49 56124.0 50 55520.0 51 50746.5 52 45973.0 53 43663.0 54 41353.0 55 41776.0 56 42199.0 57 41033.0 58 39867.0 59 36366.0 60 32865.0 61 29117.5 62 25370.0 63 22184.5 64 18999.0 65 16590.0 66 14181.0 67 12547.5 68 10914.0 69 10041.0 70 9168.0 71 7145.5 72 5123.0 73 4610.0 74 4097.0 75 3031.0 76 1965.0 77 1774.5 78 1584.0 79 1346.0 80 1108.0 81 894.0 82 680.0 83 563.0 84 446.0 85 376.0 86 306.0 87 214.0 88 122.0 89 84.0 90 46.0 91 28.5 92 11.0 93 8.0 94 5.0 95 3.5 96 2.0 97 2.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01728566489810029 2 0.003714275102071137 3 8.571404081702625E-4 4 1.4285673469504372E-4 5 0.0 6 5.714269387801749E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 700002.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.93865225918981 #Duplication Level Percentage of deduplicated Percentage of total 1 80.62145724459798 47.51720033168498 2 12.311517902028022 14.512485448208393 3 3.29349882387549 5.823431456893443 4 1.2624539242941861 2.976293313488983 5 0.6650530007298691 1.9598663771974227 6 0.4050501015656383 1.4323864250235998 7 0.24821432252327066 1.02405923486646 8 0.15657811544372863 0.7382802478029759 9 0.1332402470663731 0.7067700529896148 >10 0.7312115661176503 8.212821470709358 >50 0.08574069481081356 3.6258416653374717 >100 0.08086885809189416 9.171684879157697 >500 0.004628037059357312 1.7432891319861445 >1k 4.8716179572182237E-4 0.5555899646534118 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2027 0.28957060122685363 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1843 0.2632849620429656 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 852 0.12171393796017727 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 834 0.11914251673566646 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 767 0.10957111551109854 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 755 0.107856834694758 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 729 0.10414255959268687 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 718 0.10257113551104141 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 716 0.10228542204165131 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 1.4285673469504372E-4 0.0 12 0.0 0.0 0.0 2.8571346939008745E-4 2.8571346939008745E-4 13 0.0 0.0 0.0 2.8571346939008745E-4 2.8571346939008745E-4 14 0.0 0.0 0.0 4.285702040851312E-4 2.8571346939008745E-4 15 0.0 0.0 0.0 4.285702040851312E-4 2.8571346939008745E-4 16 0.0 0.0 0.0 4.285702040851312E-4 2.8571346939008745E-4 17 0.0 0.0 0.0 5.714269387801749E-4 2.8571346939008745E-4 18 0.0 0.0 0.0 9.99997142865306E-4 2.8571346939008745E-4 19 0.0 0.0 0.0 9.99997142865306E-4 2.8571346939008745E-4 20 0.0 0.0 0.0 0.0017142808163405248 2.8571346939008745E-4 21 0.0 0.0 0.0 0.0018571375510355685 2.8571346939008745E-4 22 0.0 0.0 0.0 0.003285704897986006 2.8571346939008745E-4 23 0.0 0.0 0.0 0.005285699183716618 2.8571346939008745E-4 24 0.0 0.0 0.0 0.008142833877617493 2.8571346939008745E-4 25 0.0 0.0 0.0 0.00999997142865306 2.8571346939008745E-4 26 0.0 0.0 0.0 0.013714246530724198 2.8571346939008745E-4 27 0.0 0.0 0.0 0.018285662040965597 2.8571346939008745E-4 28 0.0 0.0 0.0 0.025857068979802916 2.8571346939008745E-4 29 0.0 0.0 0.0 0.03871417510235685 2.8571346939008745E-4 30 0.0 0.0 0.0 0.0637141036739895 2.8571346939008745E-4 31 0.0 0.0 0.0 0.1149996714295102 2.8571346939008745E-4 32 0.0 0.0 0.0 0.1708566546952723 2.8571346939008745E-4 33 0.0 0.0 0.0 0.22914220245085015 2.8571346939008745E-4 34 0.0 0.0 0.0 0.2985705755126414 2.8571346939008745E-4 35 0.0 0.0 0.0 0.3742846449010146 2.8571346939008745E-4 36 0.0 0.0 0.0 0.4787129179630915 2.8571346939008745E-4 37 0.0 0.0 0.0 0.6462838677603778 2.8571346939008745E-4 38 0.0 0.0 0.0 0.8337119036802751 2.8571346939008745E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGCGT 30 0.005743564 29.333143 43 TCCTATA 85 8.223651E-9 25.882183 2 GTCCTAC 365 0.0 22.307598 1 TAGTACG 70 3.2130207E-5 21.999859 2 GAAGTAT 60 2.8712305E-4 21.999857 6 ATCACGG 155 1.8189894E-12 21.290184 35 GTCCTAT 240 0.0 21.089224 1 GCATAAG 65 4.920037E-4 20.313364 1 TCGCAAT 55 0.004474521 20.005585 1 TCACGGA 165 3.6379788E-12 19.99987 36 AATCACG 165 3.6379788E-12 19.99987 34 ATAATAC 55 0.004481928 19.999868 3 AATACGA 220 0.0 19.999868 39 CTATTCC 200 0.0 19.799871 4 TCTAGAC 80 8.982136E-5 19.249874 3 CCAGTAC 80 8.982136E-5 19.249874 3 TGCGTAG 80 8.982136E-5 19.249874 13 CAATACG 230 0.0 19.130312 38 TCCTACA 430 0.0 18.930109 2 CTAGACA 130 3.5810444E-8 18.615263 4 >>END_MODULE