##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062502_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1879221 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.317726866611217 32.0 32.0 32.0 32.0 32.0 2 31.4323504260542 32.0 32.0 32.0 32.0 32.0 3 31.498520929683096 32.0 32.0 32.0 32.0 32.0 4 31.590398894009805 32.0 32.0 32.0 32.0 32.0 5 31.53643557623079 32.0 32.0 32.0 32.0 32.0 6 35.12090967480674 36.0 36.0 36.0 36.0 36.0 7 35.130360931471074 36.0 36.0 36.0 36.0 36.0 8 35.074163177188844 36.0 36.0 36.0 36.0 36.0 9 35.202844689368625 36.0 36.0 36.0 36.0 36.0 10 35.075906452726954 36.0 36.0 36.0 36.0 36.0 11 35.20647598127096 36.0 36.0 36.0 36.0 36.0 12 35.11413825196717 36.0 36.0 36.0 36.0 36.0 13 35.150016416376786 36.0 36.0 36.0 36.0 36.0 14 35.12387100825289 36.0 36.0 36.0 36.0 36.0 15 35.08210902283446 36.0 36.0 36.0 36.0 36.0 16 35.09162041079788 36.0 36.0 36.0 36.0 36.0 17 35.06937768362529 36.0 36.0 36.0 36.0 36.0 18 35.080747288371086 36.0 36.0 36.0 36.0 36.0 19 35.063288458355885 36.0 36.0 36.0 36.0 36.0 20 35.0591468486144 36.0 36.0 36.0 36.0 36.0 21 35.05246056743725 36.0 36.0 36.0 36.0 36.0 22 35.03442490265913 36.0 36.0 36.0 36.0 36.0 23 34.99728770591644 36.0 36.0 36.0 36.0 36.0 24 34.97146796465131 36.0 36.0 36.0 36.0 36.0 25 34.94484416681167 36.0 36.0 36.0 32.0 36.0 26 34.906354281907234 36.0 36.0 36.0 32.0 36.0 27 34.894216273658074 36.0 36.0 36.0 32.0 36.0 28 34.8764482729812 36.0 36.0 36.0 32.0 36.0 29 34.85928264956596 36.0 36.0 36.0 32.0 36.0 30 34.845780246176474 36.0 36.0 36.0 32.0 36.0 31 34.84802532538749 36.0 36.0 36.0 32.0 36.0 32 34.81408573020416 36.0 36.0 36.0 32.0 36.0 33 34.79431211124184 36.0 36.0 36.0 32.0 36.0 34 34.78564043292407 36.0 36.0 36.0 32.0 36.0 35 34.757275488087885 36.0 36.0 36.0 32.0 36.0 36 34.733176140539086 36.0 36.0 36.0 32.0 36.0 37 34.72605031552968 36.0 36.0 36.0 32.0 36.0 38 34.698732613141296 36.0 36.0 36.0 32.0 36.0 39 34.69662961407945 36.0 36.0 36.0 32.0 36.0 40 34.6905590135487 36.0 36.0 36.0 32.0 36.0 41 34.66107285944548 36.0 36.0 36.0 32.0 36.0 42 34.63521001521375 36.0 36.0 36.0 32.0 36.0 43 34.62768455652635 36.0 36.0 36.0 32.0 36.0 44 34.58908398746076 36.0 36.0 36.0 32.0 36.0 45 34.5648803413755 36.0 36.0 36.0 32.0 36.0 46 34.56381500632443 36.0 36.0 36.0 32.0 36.0 47 34.535305320662125 36.0 36.0 36.0 32.0 36.0 48 34.493577391908666 36.0 36.0 36.0 32.0 36.0 49 34.4854399775226 36.0 36.0 36.0 32.0 36.0 50 33.9585711313358 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 10.0 21 31.0 22 139.0 23 413.0 24 1095.0 25 2705.0 26 5735.0 27 10794.0 28 18015.0 29 28407.0 30 41683.0 31 59984.0 32 88541.0 33 145127.0 34 320675.0 35 1155864.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.068934098439875 17.882715596017785 11.301128180892135 26.747222124650204 2 16.733080238024538 20.605981265838412 35.760142704032816 26.900795792104237 3 18.681221025027565 23.890968961392247 28.52983810200893 28.897971911571258 4 12.635242281372058 15.471259352284457 35.74621385468439 36.147284511659095 5 14.64107448835155 36.30506273879588 33.32925362650461 15.724609146347953 6 34.68096836024346 35.14860968764667 16.459878523939214 13.710543428170654 7 30.30592479858665 30.286501846510788 20.828588456912975 18.578984897989592 8 28.422149390625158 32.27794921406264 19.570875378680846 19.72902601663136 9 27.583025093908592 13.902622416416163 18.6127656087283 39.901586880946944 10 16.016849534993487 26.333358343696673 31.443082000467214 26.206710120842626 11 37.845894655285356 20.98720693308557 22.101658080662144 19.065240330966926 12 24.807247258305438 23.65842016452562 28.3270567964066 23.207275780762348 13 29.43187629342158 19.088068939204064 25.313733722643583 26.16632104473077 14 23.58328264743742 19.529262391171663 24.762015750143277 32.12543921124764 15 25.3130419466364 27.075314718173114 22.05988545253592 25.55175788265457 16 26.131412963137386 25.56053811659193 23.499205255794823 24.808843664475866 17 24.294055888051485 25.617795884571322 25.042610741365706 25.045537486011494 18 25.2721207351344 24.428579714679646 26.021633432150875 24.27766611803508 19 25.724276176138943 24.85082914675815 25.198047488826486 24.22684718827642 20 25.76381383562657 24.19449335655572 24.88403439510308 25.15765841271463 21 26.8557556562001 24.07891354981665 24.322259063729064 24.743071730254186 22 25.90972535960379 24.41080639264887 24.68054582191238 24.99892242583496 23 24.516488481131276 23.978127106923562 25.414254097841603 26.091130314103555 24 24.80251125333316 24.958426922645074 25.08438336949193 25.154678454529826 25 24.959650834042403 24.324121537594568 25.23061417470324 25.485613453659788 26 24.68192937392675 25.18761763517968 25.521745446650502 24.608707544243067 27 25.513869842876385 24.627013001663986 24.75994042212172 25.09917673333791 28 24.66548639037133 24.544638443269847 25.549363273398924 25.240511892959898 29 24.651225161915498 24.83263011641526 25.338158737051153 25.177985984618097 30 24.618073127109586 24.907395138730358 25.657759252371058 24.816772481788995 31 25.195759306648874 24.644945964311805 24.61690242925127 25.54239229978805 32 24.882544416010678 24.735515407714153 24.706567242490372 25.675372933784796 33 24.524789793217508 24.287883117525826 25.409518092869334 25.77780899638733 34 25.18868190595997 24.51702061652142 25.436444143610572 24.85785333390804 35 25.759397111888383 24.401600450399393 25.290692260250392 24.548310177461833 36 24.587901050488473 24.92325277335662 25.104444873700327 25.384401302454577 37 25.6419016177448 24.669903114109516 24.75871651072439 24.929478757421293 38 24.614933528307738 24.469447712642634 25.495936880228566 25.419681878821066 39 25.159361245963087 24.384412477297772 24.869932807264288 25.586293469474853 40 25.461348079869268 24.44433092222788 25.441765497512 24.652555500390854 41 24.388297065645816 24.76627283326442 25.86204602864698 24.98338407244278 42 25.587517380872182 24.908140128276557 25.260147688856183 24.244194801995082 43 24.669158124563317 24.00382924626747 25.62599076957952 25.70102185958969 44 24.397609434973322 24.54197776631913 25.282657015859233 25.777755782848317 45 24.391755945681748 24.840505720189377 25.46768049101197 25.300057843116907 46 24.313451492348683 24.355011310549752 25.606116157829394 25.725421039272167 47 24.422686008024606 24.277732250614616 25.983333510711894 25.316248230648885 48 25.024198856866754 24.98013804656291 25.18453124991685 24.81113184665348 49 24.15468962937302 24.93410833531554 25.423779321325167 25.487422713986273 50 23.993292965542636 25.26536261567958 25.351089627031627 25.390254791746152 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 33.0 1 34.5 2 36.0 3 145.0 4 254.0 5 280.0 6 306.0 7 303.0 8 300.0 9 383.0 10 466.0 11 712.5 12 959.0 13 1628.0 14 2297.0 15 3010.5 16 3724.0 17 4320.5 18 4917.0 19 5361.5 20 5806.0 21 6936.0 22 8066.0 23 8825.0 24 9584.0 25 11423.5 26 13263.0 27 16161.5 28 19060.0 29 22116.0 30 25172.0 31 27344.0 32 29516.0 33 34238.5 34 38961.0 35 45119.0 36 51277.0 37 60463.5 38 69650.0 39 75361.0 40 81072.0 41 88847.5 42 96623.0 43 98598.0 44 100573.0 45 109824.0 46 119075.0 47 126447.5 48 133820.0 49 138155.0 50 142490.0 51 136821.5 52 131153.0 53 129309.0 54 127465.0 55 128989.5 56 130514.0 57 127888.0 58 125262.0 59 115110.5 60 104959.0 61 92581.5 62 80204.0 63 71318.5 64 62433.0 65 53522.0 66 44611.0 67 39737.0 68 34863.0 69 32350.0 70 29837.0 71 23307.5 72 16778.0 73 14969.0 74 13160.0 75 9709.0 76 6258.0 77 5688.5 78 5119.0 79 4455.0 80 3791.0 81 2936.0 82 2081.0 83 1869.0 84 1657.0 85 1360.5 86 1064.0 87 773.0 88 482.0 89 322.0 90 162.0 91 105.0 92 48.0 93 29.5 94 11.0 95 9.5 96 8.0 97 4.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014208014916819257 2 0.004629577894244477 3 6.917760071859563E-4 4 5.3213539014304335E-5 5 5.3213539014304335E-5 6 1.59640617042913E-4 7 5.3213539014304335E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.0642707802860867E-4 47 5.3213539014304335E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1879221.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.10053879143643 #Duplication Level Percentage of deduplicated Percentage of total 1 81.32028949737281 46.434323449755766 2 11.813361114316686 13.490985691305731 3 3.0865425179277017 5.287297223290458 4 1.2367274959812629 2.824712254348566 5 0.6253978506325425 1.7855277115062234 6 0.4086551004296435 1.4000655848640722 7 0.2732473517989782 1.0921799707738382 8 0.18306065470862568 0.8362289612300504 9 0.14223470663500756 0.7309510545330746 >10 0.7511098983154496 7.907567514500184 >50 0.07283227751726089 2.941089493325435 >100 0.07353791466921947 8.995898768223459 >500 0.009916429407552442 3.8048217737773595 >1k 0.003087190287256893 2.4683505485659123 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2093 0.11137593715693896 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2063 0.10977953098650983 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2021 0.10754456234790906 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1924 0.10238284906352152 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 5.3213539014304335E-5 0.0 5.3213539014304335E-5 0.0 6 0.0 5.3213539014304335E-5 0.0 5.3213539014304335E-5 5.3213539014304335E-5 7 0.0 5.3213539014304335E-5 0.0 5.3213539014304335E-5 5.3213539014304335E-5 8 0.0 5.3213539014304335E-5 0.0 5.3213539014304335E-5 5.3213539014304335E-5 9 0.0 5.3213539014304335E-5 0.0 5.3213539014304335E-5 5.3213539014304335E-5 10 0.0 5.3213539014304335E-5 0.0 1.0642707802860867E-4 5.3213539014304335E-5 11 0.0 5.3213539014304335E-5 0.0 1.0642707802860867E-4 5.3213539014304335E-5 12 0.0 5.3213539014304335E-5 0.0 1.0642707802860867E-4 2.1285415605721734E-4 13 0.0 5.3213539014304335E-5 0.0 1.0642707802860867E-4 2.6606769507152165E-4 14 0.0 5.3213539014304335E-5 0.0 1.0642707802860867E-4 2.6606769507152165E-4 15 0.0 5.3213539014304335E-5 0.0 1.59640617042913E-4 2.6606769507152165E-4 16 0.0 5.3213539014304335E-5 0.0 1.59640617042913E-4 2.6606769507152165E-4 17 0.0 5.3213539014304335E-5 0.0 1.59640617042913E-4 2.6606769507152165E-4 18 0.0 5.3213539014304335E-5 0.0 2.1285415605721734E-4 2.6606769507152165E-4 19 0.0 5.3213539014304335E-5 0.0 3.19281234085826E-4 2.6606769507152165E-4 20 0.0 5.3213539014304335E-5 0.0 4.78921851128739E-4 3.19281234085826E-4 21 0.0 5.3213539014304335E-5 0.0 6.917760071859563E-4 3.19281234085826E-4 22 0.0 5.3213539014304335E-5 0.0 0.0011706978583146952 4.257083121144347E-4 23 0.0 5.3213539014304335E-5 0.0 0.001756046787472043 4.257083121144347E-4 24 0.0 5.3213539014304335E-5 0.0 0.0026606769507152165 4.257083121144347E-4 25 0.0 5.3213539014304335E-5 0.0 0.0031395988018439553 4.257083121144347E-4 26 0.0 5.3213539014304335E-5 0.0 0.004310296660158651 4.78921851128739E-4 27 0.0 5.3213539014304335E-5 0.0 0.006066343447630694 4.78921851128739E-4 28 0.0 5.3213539014304335E-5 0.0 0.014048374299776343 4.78921851128739E-4 29 0.0 5.3213539014304335E-5 0.0 0.03176848279153969 4.78921851128739E-4 30 0.0 5.3213539014304335E-5 0.0 0.0663572831508375 4.78921851128739E-4 31 0.0 5.3213539014304335E-5 0.0 0.13239528506758919 4.78921851128739E-4 32 0.0 5.3213539014304335E-5 0.0 0.20955491663833045 4.78921851128739E-4 33 0.0 5.3213539014304335E-5 0.0 0.29017342824500153 4.78921851128739E-4 34 0.0 5.3213539014304335E-5 0.0 0.3831906944420055 5.321353901430433E-4 35 0.0 1.59640617042913E-4 0.0 0.49073525678991453 5.321353901430433E-4 36 0.0 1.59640617042913E-4 0.0 0.6510676498400135 5.321353901430433E-4 37 0.0 1.59640617042913E-4 0.0 0.8658374933017458 5.321353901430433E-4 38 0.0 1.59640617042913E-4 0.0 1.1555319996956186 5.853489291573476E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 345 0.0 19.76801 4 GTATCAA 3455 0.0 18.851456 1 TATCGAG 60 0.0074138255 18.333235 10 CGCAATA 585 0.0 17.675116 36 GTCGATA 115 4.275653E-6 17.217299 36 ATACGAA 610 0.0 16.950727 40 CGTCGTA 650 0.0 16.922983 10 AACGCAG 4105 0.0 15.863496 6 CGAATGC 640 0.0 15.812415 43 TAGCGGC 675 0.0 15.644359 30 CGGTTAA 85 0.0029808707 15.529328 44 CCGTCGT 710 0.0 15.492874 9 CTAGCGG 655 0.0 15.450298 29 TACGAAT 670 0.0 15.432753 41 CAATACG 675 0.0 15.318435 38 TCTAGCG 665 0.0 15.217961 28 ACCGTCG 725 0.0 15.172332 8 TCGATAT 145 2.2872246E-6 15.172331 37 ATACCGT 785 0.0 15.133677 6 GAGCGTT 175 6.415212E-8 15.085632 7 >>END_MODULE