##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062501_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1041964 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.123007128845142 32.0 32.0 32.0 32.0 32.0 2 31.21660057353229 32.0 32.0 32.0 32.0 32.0 3 31.365146972448184 32.0 32.0 32.0 32.0 32.0 4 31.5096807567248 32.0 32.0 32.0 32.0 32.0 5 31.39040216360642 32.0 32.0 32.0 32.0 32.0 6 34.96150730735419 36.0 36.0 36.0 36.0 36.0 7 34.975593206675086 36.0 36.0 36.0 36.0 36.0 8 34.9066052186064 36.0 36.0 36.0 32.0 36.0 9 35.05327247390505 36.0 36.0 36.0 36.0 36.0 10 34.90476254457928 36.0 36.0 36.0 32.0 36.0 11 35.06822308640222 36.0 36.0 36.0 36.0 36.0 12 34.95287553120837 36.0 36.0 36.0 32.0 36.0 13 35.009730662479704 36.0 36.0 36.0 36.0 36.0 14 34.9662617902346 36.0 36.0 36.0 32.0 36.0 15 34.934160873120376 36.0 36.0 36.0 32.0 36.0 16 34.93833184255886 36.0 36.0 36.0 32.0 36.0 17 34.90609272489261 36.0 36.0 36.0 32.0 36.0 18 34.92101550533416 36.0 36.0 36.0 32.0 36.0 19 34.88815064627953 36.0 36.0 36.0 32.0 36.0 20 34.87350330721599 36.0 36.0 36.0 32.0 36.0 21 34.84815022400006 36.0 36.0 36.0 32.0 36.0 22 34.83290113669954 36.0 36.0 36.0 32.0 36.0 23 34.78469601636909 36.0 36.0 36.0 32.0 36.0 24 34.76209734693329 36.0 36.0 36.0 32.0 36.0 25 34.73539872778714 36.0 36.0 36.0 32.0 36.0 26 34.68792779788937 36.0 36.0 36.0 32.0 36.0 27 34.665523952842904 36.0 36.0 36.0 32.0 36.0 28 34.641953080912586 36.0 36.0 36.0 32.0 36.0 29 34.59051464350016 36.0 36.0 36.0 32.0 36.0 30 34.589050101539016 36.0 36.0 36.0 32.0 36.0 31 34.57316375613745 36.0 36.0 36.0 32.0 36.0 32 34.522379851895074 36.0 36.0 36.0 32.0 36.0 33 34.47380139812892 36.0 36.0 36.0 32.0 36.0 34 34.43840958036938 36.0 36.0 36.0 32.0 36.0 35 34.38627342211439 36.0 36.0 36.0 32.0 36.0 36 34.35060136434656 36.0 36.0 36.0 32.0 36.0 37 34.31107312728655 36.0 36.0 36.0 32.0 36.0 38 34.24986275917402 36.0 36.0 36.0 32.0 36.0 39 34.184250127643566 36.0 36.0 36.0 32.0 36.0 40 34.14788322821134 36.0 36.0 36.0 32.0 36.0 41 34.10183173315009 36.0 36.0 36.0 32.0 36.0 42 34.01001282194011 36.0 36.0 36.0 32.0 36.0 43 34.010649120315094 36.0 36.0 36.0 32.0 36.0 44 33.979211373905436 36.0 36.0 36.0 32.0 36.0 45 33.83228787174989 36.0 36.0 36.0 32.0 36.0 46 33.89595705801736 36.0 36.0 36.0 32.0 36.0 47 33.80714400881413 36.0 36.0 36.0 32.0 36.0 48 33.77218598723181 36.0 36.0 36.0 32.0 36.0 49 33.769655189622675 36.0 36.0 36.0 32.0 36.0 50 33.15299185000634 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 1.0 19 1.0 20 8.0 21 27.0 22 118.0 23 317.0 24 926.0 25 2095.0 26 4629.0 27 8516.0 28 14923.0 29 22441.0 30 31701.0 31 44995.0 32 65905.0 33 101374.0 34 204758.0 35 539228.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.638602718504 18.372890596579268 12.34585913346125 25.64264755145548 2 15.673872879525877 21.17071766201982 36.545816637473905 26.6095928209804 3 18.365885797809703 25.05962326732626 29.0065156114588 27.567975323405243 4 12.34794325710222 16.09394959321972 35.96787985753813 35.59022729213993 5 14.16488477528974 37.000414601656104 33.295296190655336 15.539404432398815 6 33.742113435998625 35.583543353788336 16.946203412408515 13.728139797804525 7 29.434346517102817 31.061179715594506 21.256129056406035 18.248344710896642 8 28.549642789962032 32.141801444195764 19.996468208114678 19.312087557727523 9 27.4684154155038 14.327750286958091 18.90804288823798 39.29579140930013 10 15.813502193933763 26.910526659270378 31.605218606400985 25.67075254039487 11 37.07805643956989 21.45669140200621 21.82944900207685 19.635803156347052 12 24.07357643834144 24.430498558491465 28.898119320821063 22.59780568234603 13 29.729913893378274 19.529465509365007 25.553569988982343 25.187050608274376 14 23.75158834662234 19.639258170147915 25.429477409968097 31.179676073261646 15 25.31642168059549 26.830773424033843 23.601967054523957 24.25083784084671 16 25.83544153156923 25.700983911152402 24.389134365486715 24.074440191791656 17 23.651872809425278 26.05157183933418 26.163763815256573 24.13279153598397 18 25.12908315450438 24.242392251555717 27.447781305304215 23.180743288635693 19 24.979653807617154 26.22086751557635 25.912123643427222 22.887355033379272 20 25.112383921133553 23.744966236837357 26.920507810250644 24.22214203177845 21 26.293902668422326 24.771873116537616 24.65152346914097 24.282700745899092 22 24.83003251551877 24.957580108333875 25.61556829218668 24.596819083960675 23 23.457528283126862 24.375794173311167 26.08928907332691 26.077388470235057 24 23.64669028872399 26.004353317389082 25.6790061844747 24.669950209412224 25 24.774176459071523 24.464856751288913 25.528905029348426 25.232061760291142 26 23.707632893266947 25.186954635668794 26.38833971231252 24.717072758751744 27 25.291468803144827 25.277936665758126 25.526505714208938 23.90408881688811 28 24.065226821656026 24.24719088183469 26.590170101846127 25.097412194663153 29 23.568184697359985 25.561055852217546 26.900641480895693 23.97011796952678 30 24.655938208997625 24.889055667950142 26.704473475091273 23.750532647960966 31 24.077799232986933 25.254999213024636 25.463355739737647 25.20384581425078 32 23.980770928746097 25.312294858555575 25.687547746371276 25.019386466327052 33 23.796887416455846 24.71217815586719 26.06529592193204 25.425638505744917 34 24.023862628651276 25.462396013681854 26.62059341781482 23.89314793985205 35 25.547619687436416 24.81055007658614 25.92018534229589 23.72164489368155 36 24.174539619411036 25.70443892495326 25.68677996552664 24.434241490109063 37 25.463835602765545 25.36143283261226 25.571037003197805 23.603694561424387 38 24.2522774299304 25.231485924657665 25.598005305365636 24.918231340046297 39 24.423492558284163 25.151060881182076 25.707414075726227 24.718032484807537 40 25.057103700319782 25.299914392435824 25.533799632232974 24.10918227501142 41 23.305123785466677 25.86240983373706 26.328932669458833 24.503533711337436 42 25.673631718562252 25.675743115885002 25.526313768997777 23.124311396554965 43 24.543074424836174 24.271567923651872 25.647335224633483 25.53802242687847 44 24.167533619203734 25.061326494965275 26.052435592784395 24.718704293046592 45 24.609967330925063 25.364312010779642 25.5369667282171 24.4887539300782 46 23.847103975860946 25.106649660304637 26.219165171891902 24.827081191942515 47 24.45585879728935 24.59981784381979 26.53731466472418 24.407008694166684 48 24.793850843215314 26.685470899186537 24.659393222798485 23.861285034799668 49 23.60657373959177 25.50433604232008 26.45072190593917 24.43836831214898 50 23.546974751526925 26.66886763842129 24.72388681374788 25.0602707963039 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 19.0 2 23.0 3 73.5 4 124.0 5 145.5 6 167.0 7 177.0 8 187.0 9 298.0 10 409.0 11 570.0 12 731.0 13 1397.0 14 2063.0 15 2910.5 16 3758.0 17 4522.5 18 5287.0 19 5816.0 20 6345.0 21 6990.0 22 7635.0 23 7964.0 24 8293.0 25 8515.0 26 8737.0 27 10073.5 28 11410.0 29 13210.5 30 15011.0 31 16571.5 32 18132.0 33 20755.5 34 23379.0 35 26327.0 36 29275.0 37 34325.5 38 39376.0 39 42711.5 40 46047.0 41 50890.0 42 55733.0 43 56864.5 44 57996.0 45 66033.0 46 74070.0 47 80494.0 48 86918.0 49 85377.5 50 83837.0 51 76055.5 52 68274.0 53 65321.0 54 62368.0 55 63310.0 56 64252.0 57 62827.5 58 61403.0 59 56308.5 60 51214.0 61 45087.0 62 38960.0 63 34403.0 64 29846.0 65 25676.0 66 21506.0 67 19424.0 68 17342.0 69 16229.0 70 15116.0 71 11986.0 72 8856.0 73 7990.5 74 7125.0 75 5227.5 76 3330.0 77 3039.0 78 2748.0 79 2323.5 80 1899.0 81 1525.5 82 1152.0 83 962.0 84 772.0 85 624.0 86 476.0 87 358.0 88 240.0 89 163.5 90 87.0 91 54.5 92 22.0 93 15.0 94 8.0 95 5.5 96 3.0 97 4.0 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01353213738670434 2 0.0037429316175990727 3 4.7986302789731697E-4 4 9.59726055794634E-5 5 0.0 6 1.919452111589268E-4 7 9.59726055794634E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 9.59726055794634E-5 47 9.59726055794634E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1041964.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.44093277766412 #Duplication Level Percentage of deduplicated Percentage of total 1 80.93762369066614 44.87257354218096 2 11.85502764907394 13.145075819393155 3 3.1731627808545944 5.277693132778358 4 1.307502582769037 2.8995665119168157 5 0.6778902769364531 1.8791434637133004 6 0.40613698602010956 1.3509968004278405 7 0.27090407514964504 1.0513422233696716 8 0.20335354483385465 0.9019288167386754 9 0.13609527823072318 0.6790724254572318 >10 0.8337041191998046 8.794597285167061 >50 0.09271044268890062 3.611233003151519 >100 0.09547330439623078 10.724649177397923 >500 0.00833221534454407 3.110242514013486 >1k 0.0020830538361360177 1.7018852842940306 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3465 0.3325450783328407 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2901 0.27841652878602335 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1265 0.12140534605802121 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1227 0.1177583870460016 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1200 0.11516712669535607 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1162 0.11152016768333646 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1154 0.11075238683870077 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1099 0.10547389353183027 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1075 0.10317055099792316 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1049 0.10067526325285711 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1048 0.10057929064727764 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 9.59726055794634E-5 0.0 8 0.0 0.0 0.0 9.59726055794634E-5 0.0 9 0.0 0.0 0.0 9.59726055794634E-5 0.0 10 0.0 0.0 0.0 9.59726055794634E-5 0.0 11 0.0 0.0 0.0 9.59726055794634E-5 0.0 12 0.0 0.0 0.0 9.59726055794634E-5 0.0 13 0.0 0.0 0.0 9.59726055794634E-5 0.0 14 0.0 0.0 0.0 9.59726055794634E-5 0.0 15 0.0 0.0 0.0 9.59726055794634E-5 9.59726055794634E-5 16 0.0 0.0 0.0 1.919452111589268E-4 9.59726055794634E-5 17 0.0 0.0 0.0 2.879178167383902E-4 9.59726055794634E-5 18 0.0 0.0 0.0 2.879178167383902E-4 1.919452111589268E-4 19 0.0 0.0 0.0 2.879178167383902E-4 1.919452111589268E-4 20 0.0 0.0 0.0 8.637534502151706E-4 2.879178167383902E-4 21 0.0 0.0 0.0 0.0013436164781124875 2.879178167383902E-4 22 0.0 0.0 0.0 0.0019194521115892679 4.7986302789731697E-4 23 0.0 0.0 0.0 0.0027832055618044384 4.7986302789731697E-4 24 0.0 0.0 0.0 0.005278493306870487 4.7986302789731697E-4 25 0.0 0.0 0.0 0.006910027601721365 4.7986302789731697E-4 26 0.0 0.0 0.0 0.009213370135628486 6.718082390562437E-4 27 0.0 0.0 0.0 0.011516712669535608 6.718082390562437E-4 28 0.0 0.0 0.0 0.01775493203220073 6.718082390562437E-4 29 0.0 0.0 0.0 0.02965553512405419 6.718082390562437E-4 30 0.0 0.0 0.0 0.05364868651892004 6.718082390562437E-4 31 0.0 0.0 0.0 0.09971553719706247 7.677808446357072E-4 32 0.0 0.0 0.0 0.15662729230568426 8.637534502151706E-4 33 0.0 0.0 0.0 0.2131551569919882 8.637534502151706E-4 34 0.0 0.0 0.0 0.28513461117658573 0.0010556986613740973 35 0.0 0.0 0.0 0.3621046408513154 0.0010556986613740973 36 0.0 0.0 0.0 0.4743925893792876 0.0010556986613740973 37 0.0 0.0 0.0 0.628140703517588 0.0010556986613740973 38 9.59726055794634E-5 0.0 0.0 0.8292033122065637 0.0010556986613740973 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGCG 30 0.0057448987 29.333078 37 CGTAATG 40 7.031834E-4 27.49976 42 TAACGCT 45 0.0013981556 24.444231 43 ACCGTAT 55 1.5935067E-4 23.999792 8 ATTCGTT 55 0.00448343 19.999826 40 CGCAATA 370 0.0 19.62145 36 ATACGAA 385 0.0 18.85698 40 CTTGCGT 70 8.122774E-4 18.856977 10 CGAATGC 400 0.0 18.699837 43 TAGCGGC 380 0.0 18.526154 30 CGATTAA 60 0.007411805 18.333174 41 CTAGCGG 385 0.0 18.285555 29 AATACGA 400 0.0 18.149843 39 TCTAGCG 390 0.0 18.051126 28 GAGCGTT 135 5.523907E-8 17.92577 7 CAATACG 405 0.0 17.92577 38 CGGTCCA 420 0.0 17.809368 10 TACGAAT 415 0.0 17.493824 41 CGAGCCG 390 0.0 17.487028 15 CCCCTAG 90 2.2102821E-4 17.115889 1 >>END_MODULE