##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062500_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 730711 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.084476626190106 32.0 32.0 32.0 32.0 32.0 2 30.67505894943418 32.0 32.0 32.0 32.0 32.0 3 30.672434108696873 32.0 32.0 32.0 32.0 32.0 4 30.741525719470488 32.0 32.0 32.0 32.0 32.0 5 30.496591675778795 32.0 32.0 32.0 32.0 32.0 6 34.14587709778558 36.0 36.0 36.0 32.0 36.0 7 33.9905653534708 36.0 36.0 36.0 32.0 36.0 8 33.9800837814129 36.0 36.0 36.0 32.0 36.0 9 34.18890368421989 36.0 36.0 36.0 32.0 36.0 10 33.787296208761056 36.0 36.0 36.0 32.0 36.0 11 34.18572048320061 36.0 36.0 36.0 32.0 36.0 12 33.91738046915949 36.0 36.0 36.0 32.0 36.0 13 34.07038487172083 36.0 36.0 36.0 32.0 36.0 14 33.95193995984733 36.0 36.0 36.0 32.0 36.0 15 33.87571009605713 36.0 36.0 36.0 32.0 36.0 16 33.8796008271396 36.0 36.0 36.0 32.0 36.0 17 33.76769612062772 36.0 36.0 36.0 32.0 36.0 18 33.80395669423343 36.0 36.0 36.0 32.0 36.0 19 33.80251973762541 36.0 36.0 36.0 32.0 36.0 20 33.786189067907834 36.0 36.0 36.0 32.0 36.0 21 33.733615615475884 36.0 36.0 36.0 32.0 36.0 22 33.69339725281267 36.0 36.0 36.0 27.0 36.0 23 33.63571918309701 36.0 36.0 36.0 27.0 36.0 24 33.603493036234575 36.0 36.0 36.0 27.0 36.0 25 33.07793642082848 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 36.0 5 69.0 6 108.0 7 38.0 8 105.0 9 122.0 10 86.0 11 30.0 12 45.0 13 47.0 14 146.0 15 179.0 16 276.0 17 394.0 18 553.0 19 829.0 20 1194.0 21 1789.0 22 2690.0 23 3814.0 24 5418.0 25 7365.0 26 10315.0 27 13003.0 28 17637.0 29 22976.0 30 29423.0 31 39661.0 32 55789.0 33 77824.0 34 163317.0 35 275429.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.110325798345556 16.642623686760576 10.658659031309709 25.588391483584168 2 16.77476128629632 19.68161469959093 36.48949550217809 27.05412851193466 3 19.74229132166368 23.68757441799992 27.730986628710635 28.839147631625767 4 12.426413725610965 14.73600646039926 35.333730264643684 37.50384954934609 5 14.46606832879743 36.70222377982334 33.38955299889933 15.44215489247989 6 35.40780170973872 34.389871906506535 16.521404592526874 13.680921791227869 7 30.691027407202505 30.097665718127864 20.4799478531892 18.731359021480433 8 29.09670411851641 32.075776647632566 19.447933345477907 19.379585888373125 9 27.20214351466269 14.150648752904047 18.119328891421556 40.527878841011706 10 15.874479521330892 26.406131612082916 31.493018495403895 26.226370371182302 11 38.461190661809134 20.829114505050946 21.146297318811886 19.56339751432803 12 24.27612440342182 23.565095020875955 28.616431917806157 23.54234865789607 13 29.862562118332768 18.84697961381476 25.281253725044767 26.0092045428077 14 23.822416358609125 19.37638557386393 24.44282461135424 32.35837345617271 15 25.645841896150156 26.725167831209756 22.597890121934512 25.031100150705576 16 26.450722826861323 25.487456022095817 23.679155843444143 24.382665307598725 17 24.256823413350872 25.64411377836238 25.37912419160364 24.71993861668311 18 25.726445834806366 23.985113444215152 26.48488735053838 23.8035533704401 19 25.517185622260257 25.77151337344659 24.590451472867368 24.120849531425783 20 25.19998026916152 23.916379610370747 25.728465297017628 25.1551748234501 21 26.59805369734473 24.534868743782493 23.67558516512879 25.191492393743985 22 25.332803387995366 24.668909797364435 24.741000637304957 25.257286177335242 23 23.998514490568933 24.16556578175619 25.113605841176568 26.722313886498313 24 24.297551691014554 25.726085925820364 24.629985652994304 25.34637673017078 25 25.217668934936377 24.474977321870487 24.470592426737994 25.836761316455142 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 104.0 1 104.0 2 250.5 3 397.0 4 397.0 5 397.0 6 1026.5 7 1656.0 8 1656.0 9 1656.0 10 1685.0 11 1714.0 12 1714.0 13 1714.0 14 1815.5 15 1917.0 16 1917.0 17 1917.0 18 3017.0 19 4117.0 20 4117.0 21 4117.0 22 6739.5 23 9362.0 24 9362.0 25 9362.0 26 14205.0 27 19048.0 28 19048.0 29 19048.0 30 24072.5 31 29097.0 32 29097.0 33 29097.0 34 35679.5 35 42262.0 36 42262.0 37 42262.0 38 48354.5 39 54447.0 40 54447.0 41 54447.0 42 63901.0 43 73355.0 44 73355.0 45 73355.0 46 89557.5 47 105760.0 48 105760.0 49 105760.0 50 102202.0 51 98644.0 52 98644.0 53 98644.0 54 90002.5 55 81361.0 56 81361.0 57 81361.0 58 75998.0 59 70635.0 60 70635.0 61 70635.0 62 63640.0 63 56645.0 64 56645.0 65 56645.0 66 47418.5 67 38192.0 68 38192.0 69 38192.0 70 28698.5 71 19205.0 72 19205.0 73 19205.0 74 14982.5 75 10760.0 76 10760.0 77 10760.0 78 8878.5 79 6997.0 80 6997.0 81 6997.0 82 4877.0 83 2757.0 84 2757.0 85 2757.0 86 2044.5 87 1332.0 88 1332.0 89 1332.0 90 906.0 91 480.0 92 480.0 93 480.0 94 279.5 95 79.0 96 79.0 97 79.0 98 233.5 99 388.0 100 388.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010263975771543058 2 0.003284472246893779 3 0.005610973421776872 4 0.014506419090447522 5 0.03325528149979951 6 0.042013874158182925 7 0.06363664978356696 8 0.0845751603575148 9 0.09511284214963234 10 0.11687247078530363 11 0.11605135272358018 12 0.1264521815054105 13 0.11687247078530363 14 0.11892526593961224 15 0.11098779134295228 16 0.1093455552195054 17 0.11919897196018674 18 0.12658903451569772 19 0.1291892417111553 20 0.12166232614535706 21 0.1254942104333998 22 0.14725383906907108 23 0.13616874523580458 24 0.1289155356905808 25 0.12768385859799566 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 730711.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.36223762169897 #Duplication Level Percentage of deduplicated Percentage of total 1 79.58424143130229 40.87624719337208 2 12.256950702982977 12.590888290481239 3 3.5693475905470966 5.499890373003559 4 1.4550370586568677 2.9893583662044794 5 0.7442732496160673 1.911376975112726 6 0.4468049215128799 1.3769340329573458 7 0.33309679998021446 1.1976017894127917 8 0.2109942621385271 0.8669709943019256 9 0.1639657356489642 0.7579482368596899 >10 0.9892734398551885 9.589089818828093 >50 0.11740408836191496 4.201222754085254 >100 0.11473570402646903 11.805214719570658 >500 0.011473570402621107 4.103915239057011 >1k 0.0024014449679904642 2.2333412167531494 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 4056 0.5550758097250487 No Hit TCCATGTACTCTGCGTTGATACCAC 3150 0.4310869824048084 No Hit GAGTACATGGAAGCAGTGGTATCAA 1846 0.2526306569902465 No Hit CATGTACTCTGCGTTGATACCACTG 1500 0.2052795154308612 No Hit GTATCAACGCAGAGTACTTTTTTTT 1391 0.19036253730955194 No Hit GCTTCCATGTACTCTGCGTTGATAC 1197 0.16381305331382723 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1093 0.14958034024395417 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1062 0.1453378969250497 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1001 0.13698986329752802 No Hit GAATAGGACCGCGGTTCTATTTTGT 992 0.13575818620494287 No Hit CCCATGTACTCTGCGTTGATACCAC 982 0.13438965610207046 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 976 0.13356853804034702 No Hit GGGTAGGCACACGCTGAGCCAGTCA 974 0.13329483201977252 No Hit TATCAACGCAGAGTACTTTTTTTTT 964 0.13192630191690013 No Hit CATGGAAGCAGTGGTATCAACGCAG 935 0.12795756461857014 No Hit GCGTTGATACCACTGCTTCCATGTA 906 0.12398882732024014 No Hit GAATAACGCCGCCGCATCGCCAGTC 879 0.12029379604248465 No Hit GTACATGGGAAGCAGTGGTATCAAC 848 0.11605135272358018 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 831 0.11372485154869708 No Hit GTATCTGATCGTCTTCGAACCTCCG 818 0.11194576241496297 No Hit GAACTACGACGGTATCTGATCGTCT 813 0.11126149736352675 No Hit GTCCTATTCCATTATTCCTAGCTGC 798 0.10920870220921815 No Hit GTATCAACGCAGAGTACATGGAAGC 746 0.10209234567428163 No Hit GTACATGGGGAATAATTGCAATCCC 744 0.10181863965370713 No Hit GATTAAGAGGGACGGCCGGGGGCAT 741 0.10140808062284541 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.3685301028724077E-4 0.0 8 0.0 0.0 0.0 1.3685301028724077E-4 0.0 9 0.0 0.0 0.0 2.7370602057448154E-4 0.0 10 0.0 0.0 0.0 4.1055903086172237E-4 0.0 11 0.0 0.0 0.0 4.1055903086172237E-4 0.0 12 0.0 0.0 0.0 4.1055903086172237E-4 4.1055903086172237E-4 13 0.0 0.0 0.0 4.1055903086172237E-4 4.1055903086172237E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGCCA 120 0.0 15.839047 16 CAAGACG 225 0.0 15.194026 4 AAGACGG 230 0.0 14.865757 5 AATCGCT 45 6.7447935E-4 14.781084 15 CGCCAGT 140 0.0 14.256121 18 TCGCCAG 135 0.0 14.080118 17 CGCAAGA 225 0.0 13.923086 2 GTAAACG 70 7.2178227E-6 13.577257 17 GCATCGC 140 0.0 13.574465 14 GTATTAG 120 5.2750693E-11 13.449356 1 ATCGCTC 50 0.0014941479 13.3048 16 AAATCGC 50 0.0014956931 13.302977 14 TCGCGTA 50 0.0014972396 13.301152 9 GCAAGAC 245 0.0 13.17488 3 CATCGCC 145 0.0 13.1063795 15 CGCATCG 145 0.0 13.105482 13 CCGTCAA 80 1.985658E-6 13.06811 18 AAACGCT 80 1.985658E-6 13.06811 19 GCGCAAG 240 0.0 13.053787 1 CGACCCG 95 7.390372E-8 12.996671 5 >>END_MODULE