##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062500_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 730711 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.214403505626713 32.0 32.0 32.0 32.0 32.0 2 31.338031040999795 32.0 32.0 32.0 32.0 32.0 3 31.461488878640118 32.0 32.0 32.0 32.0 32.0 4 31.5879273748445 32.0 32.0 32.0 32.0 32.0 5 31.50343569482326 32.0 32.0 32.0 32.0 32.0 6 35.0906637507852 36.0 36.0 36.0 36.0 36.0 7 35.115201495529696 36.0 36.0 36.0 36.0 36.0 8 35.047084278189324 36.0 36.0 36.0 36.0 36.0 9 35.19261650638898 36.0 36.0 36.0 36.0 36.0 10 35.05371754359795 36.0 36.0 36.0 36.0 36.0 11 35.20101517563031 36.0 36.0 36.0 36.0 36.0 12 35.09861354215278 36.0 36.0 36.0 36.0 36.0 13 35.1544139885673 36.0 36.0 36.0 36.0 36.0 14 35.103656575581866 36.0 36.0 36.0 36.0 36.0 15 35.06141689395671 36.0 36.0 36.0 36.0 36.0 16 35.068441558974754 36.0 36.0 36.0 36.0 36.0 17 35.036201726811285 36.0 36.0 36.0 36.0 36.0 18 35.062742999626394 36.0 36.0 36.0 36.0 36.0 19 35.03798218447512 36.0 36.0 36.0 36.0 36.0 20 35.028847246038445 36.0 36.0 36.0 36.0 36.0 21 35.01131363836045 36.0 36.0 36.0 36.0 36.0 22 34.988501610075666 36.0 36.0 36.0 36.0 36.0 23 34.93399168754816 36.0 36.0 36.0 32.0 36.0 24 34.91056245218698 36.0 36.0 36.0 32.0 36.0 25 34.87163598194088 36.0 36.0 36.0 32.0 36.0 26 34.811252328211836 36.0 36.0 36.0 32.0 36.0 27 34.79667611408615 36.0 36.0 36.0 32.0 36.0 28 34.765832182627605 36.0 36.0 36.0 32.0 36.0 29 34.730342091469815 36.0 36.0 36.0 32.0 36.0 30 34.71688259790807 36.0 36.0 36.0 32.0 36.0 31 34.7103246016551 36.0 36.0 36.0 32.0 36.0 32 34.666788922022526 36.0 36.0 36.0 32.0 36.0 33 34.64350338232215 36.0 36.0 36.0 32.0 36.0 34 34.607420717629815 36.0 36.0 36.0 32.0 36.0 35 34.56595972963319 36.0 36.0 36.0 32.0 36.0 36 34.52993591173528 36.0 36.0 36.0 32.0 36.0 37 34.4982612825043 36.0 36.0 36.0 32.0 36.0 38 34.43815270332594 36.0 36.0 36.0 32.0 36.0 39 34.370629428050215 36.0 36.0 36.0 32.0 36.0 40 34.32519422863485 36.0 36.0 36.0 32.0 36.0 41 34.304938614582234 36.0 36.0 36.0 32.0 36.0 42 34.20179660631905 36.0 36.0 36.0 32.0 36.0 43 34.23992385498508 36.0 36.0 36.0 32.0 36.0 44 34.205176875673146 36.0 36.0 36.0 32.0 36.0 45 34.08964145879835 36.0 36.0 36.0 32.0 36.0 46 34.15687050010195 36.0 36.0 36.0 32.0 36.0 47 34.09734354621732 36.0 36.0 36.0 32.0 36.0 48 34.066891014368196 36.0 36.0 36.0 32.0 36.0 49 34.087048094253404 36.0 36.0 36.0 32.0 36.0 50 33.51735501449958 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 8.0 21 16.0 22 62.0 23 217.0 24 534.0 25 1335.0 26 2823.0 27 5433.0 28 8985.0 29 13339.0 30 18889.0 31 27046.0 32 40266.0 33 61265.0 34 131832.0 35 418661.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.61982701865182 17.078725812655097 11.145648981178457 26.155798187514627 2 16.311613164579136 20.22395331523167 36.02166725059122 27.442766269597968 3 19.186460254985576 23.84386102246041 28.090153659190815 28.879525063363204 4 12.245247075439163 15.233307969804628 35.34654061540314 37.17490433935306 5 14.388314942569636 36.69125002908126 33.33711959995128 15.583315428397821 6 35.63019873930144 34.61405818482399 16.20213875347951 13.553604322395055 7 30.71583704090947 30.097398287421427 20.354011367011037 18.832753304658066 8 29.02843942406779 32.2953944856448 19.23688024403629 19.439285846251117 9 27.23662296037695 13.793688612871573 17.96264186525179 41.007046561499685 10 15.759582105647787 26.45368688852364 31.47455012994193 26.312180875886636 11 38.65495387369288 20.67712132429921 21.03458138716948 19.633343414838425 12 24.260891104691183 23.51476849260515 28.67303215635183 23.55130824635184 13 30.033761637637863 18.6629187188916 25.307953486398866 25.995366157071675 14 23.791758985426522 19.258366166651385 24.40951347386313 32.54036137405896 15 25.786117904342483 26.62297406224896 22.521489343940353 25.069418689468204 16 26.657050461810485 25.29016259506152 23.635472847678493 24.4173140954495 17 24.327127961670207 25.5660582638006 25.389381027519768 24.71743274700942 18 25.974290793487437 23.748923993206617 26.443559765762387 23.83322544754356 19 25.554699463946758 25.5671530878829 24.586874975195393 24.29127247297495 20 25.218451617671008 23.75070308234035 25.796655586134598 25.23418971385404 21 26.749699949774946 24.20368654639112 23.757956291885574 25.28865721194836 22 25.378706492717367 24.4977836654984 24.81624062043681 25.30726922134743 23 24.14265010380301 23.85033207382946 25.1509830835994 26.85603473876813 24 24.404313059472212 25.593155159837472 24.775458423371212 25.227073357319103 25 25.441522024439212 24.07709751187542 24.560736050230528 25.92064441345484 26 24.35449856372766 24.919564643203675 25.440837759387776 25.285099033680897 27 25.833058486871007 24.60466586653273 24.861949525872745 24.700326120723513 28 24.85086443203948 23.896862097327123 25.65651810360047 25.59575536703293 29 24.18685362612579 24.9053319301338 25.773527427396058 25.134287016344352 30 24.91983834922425 24.54239774685204 25.81896262681142 24.71880127711229 31 24.749182645396058 24.70935841940247 24.66775510427515 25.873703830926313 32 24.673913489738077 24.841147868309086 24.802965878438947 25.681972763513894 33 24.31672713288838 24.15195610850254 25.313290753800068 26.218026004809015 34 24.844979752597126 24.95651495598123 25.82388933518176 24.374615956239882 35 26.161095152529523 24.18042153464229 25.417572747638946 24.240910565189246 36 24.540208098687444 25.337240030600334 24.922985968460857 25.19956590225137 37 26.10224835810601 24.696357383425184 24.965273548639612 24.236120709829194 38 24.86824476434596 24.488067101768003 24.984432970079826 25.65925516380621 39 25.331902763199132 24.47232900558497 24.822125299879158 25.373642931336736 40 25.79515020302144 24.801871054356646 24.81062964701503 24.59234909560688 41 24.01606106928731 25.149340847475955 25.77393798642692 25.060660096809816 42 26.400587920532192 25.34681974132044 24.789006871389645 23.46358546675772 43 25.24910669197535 23.56773060758631 25.136750370529526 26.046412329908815 44 24.655164627328723 24.622730463890647 25.413467157330327 25.308637751450302 45 24.91628017095678 24.83786339606219 25.03972158623587 25.206134846745154 46 24.465109277278263 24.47441529471336 25.58580011221962 25.47467531578875 47 25.247190749831326 24.089414282801272 25.90572743533353 24.75766753203387 48 25.781601755003003 25.772980015354907 23.96706769160448 24.47835053803761 49 24.32863334478337 25.085841050702673 25.629421207563592 24.95610439695037 50 24.36968924786954 26.068993076606212 24.013871421122715 25.547446254401535 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 16.0 1 13.0 2 10.0 3 57.5 4 105.0 5 110.0 6 115.0 7 103.5 8 92.0 9 127.5 10 163.0 11 250.5 12 338.0 13 600.5 14 863.0 15 1180.5 16 1498.0 17 1814.0 18 2130.0 19 2236.0 20 2342.0 21 2756.5 22 3171.0 23 3415.0 24 3659.0 25 4096.5 26 4534.0 27 5678.0 28 6822.0 29 7796.5 30 8771.0 31 9558.5 32 10346.0 33 11906.5 34 13467.0 35 15592.5 36 17718.0 37 21447.0 38 25176.0 39 27166.5 40 29157.0 41 32345.5 42 35534.0 43 36800.0 44 38066.0 45 43791.5 46 49517.0 47 54519.0 48 59521.0 49 59558.0 50 59595.0 51 55124.5 52 50654.0 53 49630.5 54 48607.0 55 50220.0 56 51833.0 57 50489.5 58 49146.0 59 45495.0 60 41844.0 61 36968.0 62 32092.0 63 28123.0 64 24154.0 65 20705.5 66 17257.0 67 15091.5 68 12926.0 69 12176.5 70 11427.0 71 8680.0 72 5933.0 73 5462.0 74 4991.0 75 3520.0 76 2049.0 77 1945.5 78 1842.0 79 1565.0 80 1288.0 81 1020.5 82 753.0 83 664.5 84 576.0 85 462.5 86 349.0 87 268.0 88 187.0 89 116.5 90 46.0 91 32.5 92 19.0 93 10.5 94 2.0 95 4.0 96 6.0 97 4.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015327537152170969 2 0.003147619236606538 3 4.1055903086172237E-4 4 4.1055903086172237E-4 5 0.0 6 6.842650514362039E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.3685301028724077E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 730711.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.72930101693545 #Duplication Level Percentage of deduplicated Percentage of total 1 79.74794675307734 43.6454938333171 2 12.360294606875662 13.529405683954037 3 3.474604773586464 5.7048807170548335 4 1.4501765632549173 3.174685986323332 5 0.7537094636692381 2.0624996058233354 6 0.4427803848189975 1.4539836579092058 7 0.2832510233458229 1.0851491364033987 8 0.21204112690878324 0.9283890130048809 9 0.14977541414136508 0.7377393352931046 >10 0.9194682111451804 9.598154566585995 >50 0.09845507667978724 3.7718621531509067 >100 0.0987059924793031 10.661813182328682 >500 0.007283648299909319 2.623528523497841 >1k 0.0015069617172226177 1.022414605353502 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1703 0.23306067651917106 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1459 0.1996685420090843 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1111 0.1520436944291245 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1081 0.14793810412050729 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1076 0.14725383906907108 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1008 0.1379478343695387 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 991 0.1356213331946556 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 850 0.11632505874415466 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 803 0.10989296726065434 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 801 0.10961926124007987 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 736 0.10072381557140922 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 732 0.10017640353026025 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 732 0.10017640353026025 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3685301028724077E-4 2 0.0 0.0 0.0 0.0 1.3685301028724077E-4 3 0.0 0.0 0.0 0.0 1.3685301028724077E-4 4 0.0 0.0 0.0 0.0 1.3685301028724077E-4 5 0.0 0.0 0.0 0.0 2.7370602057448154E-4 6 0.0 0.0 0.0 0.0 4.1055903086172237E-4 7 0.0 0.0 0.0 0.0 4.1055903086172237E-4 8 0.0 0.0 0.0 0.0 4.1055903086172237E-4 9 0.0 0.0 0.0 1.3685301028724077E-4 4.1055903086172237E-4 10 0.0 0.0 0.0 1.3685301028724077E-4 4.1055903086172237E-4 11 0.0 0.0 0.0 1.3685301028724077E-4 4.1055903086172237E-4 12 0.0 0.0 0.0 1.3685301028724077E-4 4.1055903086172237E-4 13 0.0 0.0 0.0 1.3685301028724077E-4 4.1055903086172237E-4 14 0.0 0.0 0.0 1.3685301028724077E-4 5.474120411489631E-4 15 0.0 0.0 0.0 1.3685301028724077E-4 5.474120411489631E-4 16 0.0 0.0 0.0 1.3685301028724077E-4 5.474120411489631E-4 17 0.0 0.0 0.0 1.3685301028724077E-4 5.474120411489631E-4 18 0.0 0.0 0.0 2.7370602057448154E-4 5.474120411489631E-4 19 0.0 0.0 0.0 4.1055903086172237E-4 5.474120411489631E-4 20 0.0 0.0 0.0 6.842650514362039E-4 5.474120411489631E-4 21 0.0 0.0 0.0 9.579710720106855E-4 6.842650514362039E-4 22 0.0 0.0 0.0 0.002600207195457575 6.842650514362039E-4 23 0.0 0.0 0.0 0.005063561380627909 6.842650514362039E-4 24 0.0 0.0 0.0 0.008211180617234448 6.842650514362039E-4 25 0.0 0.0 0.0 0.010674534802404781 6.842650514362039E-4 26 0.0 0.0 0.0 0.01423271306987304 6.842650514362039E-4 27 0.0 0.0 0.0 0.017927744347628543 6.842650514362039E-4 28 0.0 0.0 0.0 0.022170187666533007 6.842650514362039E-4 29 0.0 0.0 0.0 0.031749898386639865 6.842650514362039E-4 30 0.0 0.0 0.0 0.04488778737421498 6.842650514362039E-4 31 0.0 0.0 0.0 0.07184783040080141 6.842650514362039E-4 32 0.0 0.0 0.0 0.10893499618864366 6.842650514362039E-4 33 0.0 0.0 0.0 0.1460221619764859 6.842650514362039E-4 34 0.0 0.0 0.0 0.19090994935070088 8.211180617234447E-4 35 0.0 0.0 0.0 0.2419561221878417 8.211180617234447E-4 36 0.0 0.0 0.0 0.31530933570180275 8.211180617234447E-4 37 0.0 0.0 0.0 0.4208230066332654 8.211180617234447E-4 38 0.0 0.0 0.0 0.5442644219123566 8.211180617234447E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTGTC 35 3.216861E-4 31.42818 31 CTACGCT 60 9.747031E-6 25.666346 33 ATTTCGT 55 1.5929117E-4 23.9997 42 TACGCTC 65 1.8122926E-5 23.692013 34 CGAGCCG 355 0.0 22.30958 15 CCTAAGC 80 3.612693E-6 21.999727 3 GATTTCG 50 0.002579657 21.999725 41 CGCAATA 260 0.0 21.153582 36 TTAACGG 105 7.7367076E-8 20.952122 35 CGCGCCA 75 5.4693628E-5 20.53308 10 GCTACGC 75 5.4693628E-5 20.53308 32 TAGCGGC 290 0.0 20.482504 30 CTAGCGG 290 0.0 20.482504 29 TAGTACT 65 4.9300096E-4 20.30744 4 TCTAGCG 295 0.0 20.135344 28 GATATAT 110 1.2586315E-7 20.007965 1 TCTAATG 55 0.0044787177 20.00249 2 TAGACCC 55 0.004482267 19.99975 4 AACGGAC 100 1.1223256E-6 19.799753 15 CGCCGGT 315 0.0 19.555313 7 >>END_MODULE