##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062498_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 876868 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.895958114562283 32.0 32.0 32.0 32.0 32.0 2 30.431771942869393 32.0 32.0 32.0 32.0 32.0 3 30.48957767873842 32.0 32.0 32.0 32.0 32.0 4 30.308331470643243 32.0 32.0 32.0 21.0 32.0 5 30.31330029149199 32.0 32.0 32.0 21.0 32.0 6 33.60368493319405 36.0 36.0 36.0 21.0 36.0 7 33.61209783000406 36.0 36.0 36.0 21.0 36.0 8 33.51273737894415 36.0 36.0 36.0 21.0 36.0 9 33.766646747286934 36.0 36.0 36.0 32.0 36.0 10 33.30363521077289 36.0 36.0 36.0 21.0 36.0 11 33.835783721153014 36.0 36.0 36.0 32.0 36.0 12 33.49787083118554 36.0 36.0 36.0 27.0 36.0 13 33.692441735814285 36.0 36.0 36.0 32.0 36.0 14 33.512056546709424 36.0 36.0 36.0 27.0 36.0 15 33.38694535551531 36.0 36.0 36.0 21.0 36.0 16 33.43471309250651 36.0 36.0 36.0 27.0 36.0 17 33.33463873695927 36.0 36.0 36.0 21.0 36.0 18 33.396466742998946 36.0 36.0 36.0 27.0 36.0 19 33.3336716586761 36.0 36.0 36.0 21.0 36.0 20 33.293040685713244 36.0 36.0 36.0 21.0 36.0 21 33.25778338358795 36.0 36.0 36.0 21.0 36.0 22 33.20239990511685 36.0 36.0 36.0 21.0 36.0 23 33.19303703636123 36.0 36.0 36.0 21.0 36.0 24 33.178528581268786 36.0 36.0 36.0 21.0 36.0 25 32.42433296687757 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 46.0 5 81.0 6 140.0 7 52.0 8 124.0 9 146.0 10 96.0 11 44.0 12 50.0 13 41.0 14 438.0 15 754.0 16 971.0 17 1167.0 18 1408.0 19 1667.0 20 2139.0 21 2780.0 22 3674.0 23 5015.0 24 6798.0 25 9140.0 26 12665.0 27 17304.0 28 23332.0 29 31144.0 30 42876.0 31 59873.0 32 89602.0 33 125366.0 34 227015.0 35 210917.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.810828504203364 17.817465160122584 11.07907531617923 26.292631019494824 2 16.55486469718811 20.13838202288196 37.40203547251063 25.904717807419303 3 18.917800017107176 23.865879736549484 28.751347190146266 28.464973056197074 4 12.36126144724941 15.410287440161783 36.501056756913975 35.72739435567483 5 14.188681225537003 36.68648233644657 34.148776094339475 14.976060343676952 6 33.701097702480524 35.86284480761968 16.962076153466132 13.47398133643366 7 29.6204452863778 30.770178822079448 21.121318285042623 18.48805760650013 8 27.53525427017526 33.28619447916132 19.953888384780885 19.224662865882543 9 26.856667336353006 14.494333540327295 18.904446412916425 39.744552710403276 10 15.243909400838948 26.848187719927203 32.495221828195895 25.412681051037957 11 36.807895316722636 21.346766210620178 22.756921474982903 19.088416997674287 12 23.98371662822299 24.029963231095987 29.2914563683285 22.694863772352527 13 28.946893682321186 19.76997766684783 25.763506076535574 25.519622574295408 14 22.72041688503121 20.169690658792984 25.593580482034735 31.51631197414107 15 24.653244358691868 27.732916240916538 22.808980425959437 24.804858974432157 16 25.178385907227913 26.16353278304849 24.394515418250734 24.26356589147287 17 23.23856500194104 26.272407572332213 26.01516293302277 24.47386449270398 18 24.224787613044672 25.11726957157212 27.054900886087513 23.6030419292957 19 24.746961482422044 25.63156861043487 25.853319874485585 23.7681500326575 20 24.80573157504139 24.99503339612947 25.913227150767824 24.286007878061312 21 25.750390795830448 24.843082200149126 24.880648840972075 24.525878163048358 22 24.759567341130573 25.348528852490094 25.37182692274748 24.52007688363185 23 23.582794146867315 24.96899630239511 26.031914966506868 25.41629458423071 24 23.978400450352208 25.71963291270772 25.787802352016936 24.514164284923133 25 24.06642794504531 25.237389469453376 25.927748648056127 24.76843393744519 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 87.0 1 87.0 2 260.5 3 434.0 4 434.0 5 434.0 6 1185.5 7 1937.0 8 1937.0 9 1937.0 10 2146.5 11 2356.0 12 2356.0 13 2356.0 14 2741.5 15 3127.0 16 3127.0 17 3127.0 18 4965.0 19 6803.0 20 6803.0 21 6803.0 22 11008.5 23 15214.0 24 15214.0 25 15214.0 26 22000.0 27 28786.0 28 28786.0 29 28786.0 30 35954.0 31 43122.0 32 43122.0 33 43122.0 34 51942.0 35 60762.0 36 60762.0 37 60762.0 38 67998.5 39 75235.0 40 75235.0 41 75235.0 42 83916.0 43 92597.0 44 92597.0 45 92597.0 46 105501.0 47 118405.0 48 118405.0 49 118405.0 50 116500.5 51 114596.0 52 114596.0 53 114596.0 54 105575.0 55 96554.0 56 96554.0 57 96554.0 58 87089.5 59 77625.0 60 77625.0 61 77625.0 62 68218.5 63 58812.0 64 58812.0 65 58812.0 66 48419.0 67 38026.0 68 38026.0 69 38026.0 70 28703.5 71 19381.0 72 19381.0 73 19381.0 74 15213.0 75 11045.0 76 11045.0 77 11045.0 78 9051.5 79 7058.0 80 7058.0 81 7058.0 82 4949.5 83 2841.0 84 2841.0 85 2841.0 86 2025.0 87 1209.0 88 1209.0 89 1209.0 90 811.0 91 413.0 92 413.0 93 413.0 94 241.0 95 69.0 96 69.0 97 69.0 98 221.5 99 374.0 100 374.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008096999776477189 2 0.0022808450074583634 3 0.004903816766035481 4 0.014711450298106443 5 0.03295821035777335 6 0.04573094239954018 7 0.0659164207155467 8 0.08359296952334902 9 0.09533932131175958 10 0.11518267287664735 11 0.11484054612552859 12 0.1286396584206517 13 0.11860394038783488 14 0.11848989813746195 15 0.10982268710912019 16 0.1092524758572556 17 0.11951627839081823 18 0.12635881341319333 19 0.12681498241468497 20 0.11609501087963069 21 0.1244200951568537 22 0.14357919321950396 23 0.1329732639348226 24 0.12647285566356622 25 0.12453413740722663 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 876868.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.88029266615793 #Duplication Level Percentage of deduplicated Percentage of total 1 83.19164899765309 48.98348640362099 2 10.524673883182926 12.39391756915359 3 2.6975453612371862 4.764967810496467 4 1.1152611647490693 2.626676151185015 5 0.595646269211457 1.7535913328337842 6 0.36394904648174087 1.285765582344841 7 0.2449993410487633 1.0097943032776917 8 0.18077157652574447 0.8515106665246878 9 0.12998145289250415 0.6888011388734759 >10 0.7622742462936197 8.622820075913658 >50 0.09894516406259088 4.138416954363101 >100 0.08792641596147519 10.051375464449922 >500 0.005604101221118847 2.19817657512566 >1k 7.729794787750135E-4 0.630699971837131 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1642 0.18725737511233162 No Hit GTACATGGAAGCAGTGGTATCAACG 1510 0.17220379806310643 No Hit TCCATGTACTCTGCGTTGATACCAC 1310 0.14939534798852278 No Hit TATCAACGCAGAGTACTTTTTTTTT 1081 0.12327967265312453 No Hit GCGCAAGACGGACCAGAGCGAAAGC 969 0.1105069406113577 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 897 0.10229589858450759 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.1404225037291816E-4 0.0 8 0.0 0.0 0.0 1.1404225037291816E-4 0.0 9 0.0 0.0 0.0 1.1404225037291816E-4 0.0 10 0.0 0.0 0.0 1.1404225037291816E-4 0.0 11 0.0 0.0 0.0 1.1404225037291816E-4 0.0 12 0.0 0.0 0.0 1.1404225037291816E-4 3.421267511187545E-4 13 0.0 0.0 0.0 1.1404225037291816E-4 3.421267511187545E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATT 50 8.741016E-5 15.193057 2 CCCTTAA 65 3.3941087E-6 14.604538 1 CTCGTAG 60 2.5643523E-5 14.250813 10 CAAGACG 160 0.0 14.247559 4 CGCATCG 115 2.5465852E-11 14.04428 13 GCGTTAT 55 1.9709859E-4 13.807928 1 GCATCGC 120 5.0931703E-11 13.459101 14 GCCGTTT 85 2.690722E-7 13.413298 15 TATTCCC 85 2.6963426E-7 13.410998 5 GAACCGC 65 5.444265E-5 13.154597 6 ACGCCCC 80 1.9888867E-6 13.066978 17 AAGACGG 175 0.0 13.027827 5 CCGTCGT 90 5.392194E-7 12.667391 9 AACCGCG 60 4.086885E-4 12.667389 7 CGCAAGA 195 0.0 12.660881 2 CTAGGAC 90 5.425918E-7 12.660881 3 CGCGGTC 70 1.0892701E-4 12.214984 10 TTAACCT 55 0.0030705428 12.088839 4 GTGCTAG 55 0.0030837026 12.081937 1 TAGGACA 175 0.0 11.940811 4 >>END_MODULE