##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062498_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 876868 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.982024660496222 32.0 32.0 32.0 32.0 32.0 2 30.8886240574408 32.0 32.0 32.0 32.0 32.0 3 31.19891819521296 32.0 32.0 32.0 32.0 32.0 4 31.424424200677866 32.0 32.0 32.0 32.0 32.0 5 31.26745302599707 32.0 32.0 32.0 32.0 32.0 6 34.849035430646346 36.0 36.0 36.0 32.0 36.0 7 34.875192161191876 36.0 36.0 36.0 32.0 36.0 8 34.78253169234138 36.0 36.0 36.0 32.0 36.0 9 34.99660154093889 36.0 36.0 36.0 32.0 36.0 10 34.784774903406216 36.0 36.0 36.0 32.0 36.0 11 35.01814070076682 36.0 36.0 36.0 36.0 36.0 12 34.881312808769394 36.0 36.0 36.0 32.0 36.0 13 34.955404918414175 36.0 36.0 36.0 32.0 36.0 14 34.90228061692296 36.0 36.0 36.0 32.0 36.0 15 34.853420355173185 36.0 36.0 36.0 32.0 36.0 16 34.87196134423881 36.0 36.0 36.0 32.0 36.0 17 34.83993143779907 36.0 36.0 36.0 32.0 36.0 18 34.8581645127887 36.0 36.0 36.0 32.0 36.0 19 34.845540035672414 36.0 36.0 36.0 32.0 36.0 20 34.83132923085345 36.0 36.0 36.0 32.0 36.0 21 34.82985466455612 36.0 36.0 36.0 32.0 36.0 22 34.80583280493757 36.0 36.0 36.0 32.0 36.0 23 34.76105069406113 36.0 36.0 36.0 32.0 36.0 24 34.74250286246048 36.0 36.0 36.0 32.0 36.0 25 34.717104512879935 36.0 36.0 36.0 32.0 36.0 26 34.661846480884236 36.0 36.0 36.0 32.0 36.0 27 34.633332497023495 36.0 36.0 36.0 32.0 36.0 28 34.62205942057413 36.0 36.0 36.0 32.0 36.0 29 34.59699407436467 36.0 36.0 36.0 32.0 36.0 30 34.58663333591829 36.0 36.0 36.0 32.0 36.0 31 34.576399184369826 36.0 36.0 36.0 32.0 36.0 32 34.54752596742041 36.0 36.0 36.0 32.0 36.0 33 34.52046830309693 36.0 36.0 36.0 32.0 36.0 34 34.50641373616097 36.0 36.0 36.0 32.0 36.0 35 34.478931834666106 36.0 36.0 36.0 32.0 36.0 36 34.4319270403299 36.0 36.0 36.0 32.0 36.0 37 34.43671681484556 36.0 36.0 36.0 32.0 36.0 38 34.39417449376645 36.0 36.0 36.0 32.0 36.0 39 34.384710127408 36.0 36.0 36.0 32.0 36.0 40 34.36400803769781 36.0 36.0 36.0 32.0 36.0 41 34.331582404649275 36.0 36.0 36.0 32.0 36.0 42 34.306586624212535 36.0 36.0 36.0 32.0 36.0 43 34.289022977232605 36.0 36.0 36.0 32.0 36.0 44 34.25616968574518 36.0 36.0 36.0 32.0 36.0 45 34.194648453359 36.0 36.0 36.0 32.0 36.0 46 34.20273518933294 36.0 36.0 36.0 32.0 36.0 47 34.17967812715255 36.0 36.0 36.0 32.0 36.0 48 34.128766245318566 36.0 36.0 36.0 32.0 36.0 49 34.12993631880739 36.0 36.0 36.0 32.0 36.0 50 33.49497073675855 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 4.0 21 17.0 22 63.0 23 204.0 24 520.0 25 1300.0 26 2842.0 27 5376.0 28 9450.0 29 15466.0 30 23558.0 31 35960.0 32 56815.0 33 97424.0 34 202541.0 35 425327.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.546168532995125 18.364078899044898 11.724222882730398 26.365529685229582 2 16.25474580504478 20.80296341239492 36.63037292419143 26.311917858368865 3 18.62453171240727 24.121044858672658 29.06536353942739 28.18905988949268 4 12.436563853542046 16.02240251075991 36.73628581790148 34.80474781779656 5 14.506402331935936 36.52830300569755 33.72548661828234 15.239808044084171 6 34.003028969078514 36.36062978835991 16.459299368432575 13.177041874129 7 29.84668159859865 30.87728141521871 20.798227327260204 18.477809658922435 8 27.71762682638664 33.496945948535014 19.515594137315993 19.269833087762354 9 27.161670855818663 14.172942791845522 18.538023967119337 40.12736238521647 10 15.239922086334545 26.953999917889583 32.32949543146745 25.476582564308426 11 37.32716896955984 21.29510941213501 22.545924814225174 18.831796804079975 12 24.07922287048906 23.977155056405298 29.167788082128666 22.775833990976977 13 29.189798236450642 19.73546759603498 25.560403618332522 25.514330549181864 14 22.927396141722586 20.130053782325273 25.275640119151344 31.666909956800794 15 24.86246504605026 27.716258319382163 22.469060337473827 24.952216297093745 16 25.423096748883527 26.117043842402733 24.215959528686188 24.243899880027552 17 23.624194291501116 26.2982569782453 25.64365446110475 24.433894269148833 18 24.45715888822491 25.175282938823173 26.67106109471437 23.696497078237545 19 25.118261813636718 25.756442246723566 25.548543224293734 23.57675271534598 20 25.12978008092438 25.032273956855537 25.52539264746803 24.31255331475205 21 26.047135942924132 24.89576538315915 24.562876054320604 24.49422261959611 22 24.978217930178772 25.493574859613986 24.975138789418704 24.553068420788534 23 23.899720368402086 25.009807633532073 25.696570065277786 25.39390193278806 24 24.33330900431992 25.725080627871012 25.419447396871593 24.522162970937472 25 24.4369734099089 25.19900372690074 25.60738902548616 24.756633837704193 26 23.94442493054827 25.801374893370493 26.003343718780936 24.2508564573003 27 24.829392793442114 25.636127672580137 25.252945711327136 24.281533822650616 28 23.943284508044542 25.255682725336083 25.959209367886615 24.841823398732764 29 23.960618930101223 25.637040010583124 25.717325754845653 24.68501530447 30 24.20273062764293 25.554131294562012 25.973122522432114 24.27001555536295 31 24.430358959387274 25.388085778019043 25.154527249255302 25.02702801333838 32 24.041931054617113 25.585720997915306 25.38021686274331 24.99213108472427 33 23.9358717617703 25.178362079583245 25.845395202014444 25.040370956632014 34 24.344941313857955 25.355697778913132 26.218883571985753 24.08047733524316 35 25.254428260581978 25.393445763786566 25.401428721312673 23.950697254318783 36 23.987304816688486 25.744923979435903 25.555499801566484 24.712271402309128 37 25.089751251043484 25.430851621908886 25.132631137183704 24.346765989863925 38 24.237969683008163 25.459704311253233 25.563596801342964 24.738729204395646 39 24.628222263784284 25.30540514649868 25.108454180104644 24.957918409612393 40 24.9987455352459 25.466204719524487 25.520830957453118 24.014218787776496 41 23.99289288695676 25.565649561849675 26.140080376978066 24.301377174215503 42 25.159431066021337 26.011782845308527 25.331292737333328 23.497493351336804 43 24.212652303425372 25.035353097615605 25.839236920494308 24.91275767846472 44 24.130541883156873 25.34851311713964 25.70592152980836 24.815023469895124 45 24.192352782858993 25.761232021239227 25.55812277332506 24.488292422576716 46 24.197142557374658 25.40063042556006 25.460616649256217 24.941610367809066 47 24.479967338299495 25.038204153874926 25.898424848437852 24.583403659387727 48 24.83201576520069 26.008589662298085 24.925530410506486 24.233864161994738 49 24.135445699922908 25.441913720195057 25.66520844642523 24.757432133456803 50 23.819662708640298 26.05203975969017 25.15829064351761 24.97000688815192 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 23.0 2 22.0 3 57.0 4 92.0 5 100.5 6 109.0 7 107.5 8 106.0 9 164.5 10 223.0 11 295.0 12 367.0 13 589.0 14 811.0 15 1109.0 16 1407.0 17 1706.5 18 2006.0 19 2265.5 20 2525.0 21 3312.5 22 4100.0 23 4532.5 24 4965.0 25 6296.5 26 7628.0 27 9582.5 28 11537.0 29 13024.0 30 14511.0 31 15435.5 32 16360.0 33 19178.0 34 21996.0 35 25333.0 36 28670.0 37 33279.5 38 37889.0 39 40033.0 40 42177.0 41 45530.0 42 48883.0 43 48997.5 44 49112.0 45 53996.0 46 58880.0 47 62051.5 48 65223.0 49 65411.0 50 65599.0 51 62725.5 52 59852.0 53 58219.0 54 56586.0 55 56779.0 56 56972.0 57 55349.0 58 53726.0 59 48772.5 60 43819.0 61 38738.5 62 33658.0 63 29572.0 64 25486.0 65 21664.0 66 17842.0 67 15673.0 68 13504.0 69 12400.5 70 11297.0 71 8860.5 72 6424.0 73 5690.5 74 4957.0 75 3625.5 76 2294.0 77 2027.5 78 1761.0 79 1542.0 80 1323.0 81 1080.0 82 837.0 83 734.0 84 631.0 85 509.5 86 388.0 87 280.5 88 173.0 89 120.5 90 68.0 91 46.5 92 25.0 93 17.5 94 10.0 95 9.5 96 9.0 97 6.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.011632309538037651 2 0.004675732265289645 3 3.421267511187545E-4 4 2.2808450074583632E-4 5 0.0 6 2.2808450074583632E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 876868.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.4548125568541 #Duplication Level Percentage of deduplicated Percentage of total 1 83.95567517792931 52.434359563217036 2 10.253047745545768 12.807043501690728 3 2.549482471837411 4.776823496867717 4 1.0393374303048064 2.596464975720364 5 0.5477257274655603 1.7104053820714065 6 0.32645630587007024 1.223326043467096 7 0.23135131085498364 1.0114301927961344 8 0.15628414985380648 0.7808557827781426 9 0.11234512138827381 0.6314844148183495 >10 0.66846811657933 7.9760851852002155 >50 0.07973229444926232 3.488700642616391 >100 0.07587866648357988 8.798262950257097 >500 0.004215481437864991 1.7647578684993472 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 997 0.1137001236217994 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 979 0.11164736311508687 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 887 0.10115547608077839 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1404225037291816E-4 2 0.0 0.0 0.0 0.0 1.1404225037291816E-4 3 0.0 0.0 0.0 0.0 1.1404225037291816E-4 4 0.0 0.0 0.0 0.0 1.1404225037291816E-4 5 0.0 0.0 0.0 0.0 2.2808450074583632E-4 6 0.0 0.0 0.0 0.0 2.2808450074583632E-4 7 0.0 0.0 0.0 0.0 2.2808450074583632E-4 8 0.0 0.0 0.0 0.0 2.2808450074583632E-4 9 0.0 0.0 0.0 0.0 2.2808450074583632E-4 10 0.0 0.0 0.0 0.0 2.2808450074583632E-4 11 0.0 0.0 0.0 0.0 2.2808450074583632E-4 12 0.0 0.0 0.0 0.0 2.2808450074583632E-4 13 0.0 0.0 0.0 0.0 2.2808450074583632E-4 14 0.0 0.0 0.0 0.0 2.2808450074583632E-4 15 0.0 0.0 0.0 1.1404225037291816E-4 2.2808450074583632E-4 16 0.0 0.0 0.0 1.1404225037291816E-4 2.2808450074583632E-4 17 0.0 0.0 0.0 1.1404225037291816E-4 2.2808450074583632E-4 18 0.0 0.0 0.0 1.1404225037291816E-4 2.2808450074583632E-4 19 0.0 0.0 0.0 1.1404225037291816E-4 2.2808450074583632E-4 20 0.0 0.0 0.0 2.2808450074583632E-4 2.2808450074583632E-4 21 0.0 0.0 0.0 3.421267511187545E-4 2.2808450074583632E-4 22 0.0 0.0 0.0 3.421267511187545E-4 2.2808450074583632E-4 23 0.0 0.0 0.0 5.702112518645908E-4 2.2808450074583632E-4 24 0.0 0.0 0.0 0.001368507004475018 2.2808450074583632E-4 25 0.0 0.0 0.0 0.0019387182563396087 2.2808450074583632E-4 26 0.0 0.0 0.0 0.002737014008950036 2.2808450074583632E-4 27 0.0 0.0 0.0 0.003421267511187545 3.421267511187545E-4 28 0.0 0.0 0.0 0.005930197019391744 3.421267511187545E-4 29 0.0 0.0 0.0 0.00992167578244388 3.421267511187545E-4 30 0.0 0.0 0.0 0.017448464307056478 3.421267511187545E-4 31 0.0 0.0 0.0 0.03637947786896089 3.421267511187545E-4 32 0.0 0.0 0.0 0.06021430819690079 3.421267511187545E-4 33 0.0 0.0 0.0 0.08655806803304489 3.421267511187545E-4 34 0.0 0.0 0.0 0.11472650387515566 4.5616900149167265E-4 35 0.0 0.0 0.0 0.1488251367366582 4.5616900149167265E-4 36 0.0 0.0 0.0 0.20037223390521722 4.5616900149167265E-4 37 1.1404225037291816E-4 0.0 0.0 0.2832809499263287 4.5616900149167265E-4 38 1.1404225037291816E-4 0.0 0.0 0.3936738482873135 4.5616900149167265E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAATA 30 0.00573958 29.338125 2 GTATTCG 45 0.0013965784 24.448437 1 CGTCGTA 160 0.0 23.374819 10 CCGTCGT 175 0.0 22.628397 9 ACTATAC 50 0.002579995 21.999828 3 GTCGTAG 180 0.0 21.999828 11 ATACCGT 195 0.0 21.43573 6 GATATAC 175 0.0 21.37492 1 TCAATAC 95 6.862392E-7 20.841942 3 ACCGTCG 180 0.0 20.777617 8 CTATACT 85 6.1106875E-6 20.70572 4 TACCGTC 195 0.0 20.307533 7 TCTAGCG 290 0.0 19.723984 28 CTAGCGG 290 0.0 19.723984 29 CGCAATA 280 0.0 19.642704 36 CAATACG 290 0.0 18.965368 38 GCTTATA 70 8.1119814E-4 18.860222 2 TAGCGGC 305 0.0 18.753952 30 CGGTCCA 305 0.0 18.753952 10 CGGCTAA 130 3.5843186E-8 18.61524 9 >>END_MODULE