##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062496_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 569442 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.148519076569695 32.0 32.0 32.0 32.0 32.0 2 31.34167483255538 32.0 32.0 32.0 32.0 32.0 3 31.46688863835123 32.0 32.0 32.0 32.0 32.0 4 31.59319474151889 32.0 32.0 32.0 32.0 32.0 5 31.517027195043568 32.0 32.0 32.0 32.0 32.0 6 35.11139150255865 36.0 36.0 36.0 36.0 36.0 7 35.123427846909784 36.0 36.0 36.0 36.0 36.0 8 35.06660906641941 36.0 36.0 36.0 36.0 36.0 9 35.1894363253852 36.0 36.0 36.0 36.0 36.0 10 35.07422529423541 36.0 36.0 36.0 36.0 36.0 11 35.20817221069046 36.0 36.0 36.0 36.0 36.0 12 35.10062482219436 36.0 36.0 36.0 36.0 36.0 13 35.138577765602115 36.0 36.0 36.0 36.0 36.0 14 35.10044394336912 36.0 36.0 36.0 36.0 36.0 15 35.064619399341815 36.0 36.0 36.0 36.0 36.0 16 35.06993512947763 36.0 36.0 36.0 36.0 36.0 17 35.04442945901426 36.0 36.0 36.0 36.0 36.0 18 35.061470702898625 36.0 36.0 36.0 36.0 36.0 19 35.02921807664345 36.0 36.0 36.0 36.0 36.0 20 35.00937408902048 36.0 36.0 36.0 36.0 36.0 21 34.98067581948644 36.0 36.0 36.0 36.0 36.0 22 34.95618693387562 36.0 36.0 36.0 36.0 36.0 23 34.88728439419642 36.0 36.0 36.0 32.0 36.0 24 34.871295057266586 36.0 36.0 36.0 32.0 36.0 25 34.82566617846945 36.0 36.0 36.0 32.0 36.0 26 34.7716009707749 36.0 36.0 36.0 32.0 36.0 27 34.72914010557704 36.0 36.0 36.0 32.0 36.0 28 34.683330347954666 36.0 36.0 36.0 32.0 36.0 29 34.651620358175194 36.0 36.0 36.0 32.0 36.0 30 34.61287716747272 36.0 36.0 36.0 32.0 36.0 31 34.60633567597753 36.0 36.0 36.0 32.0 36.0 32 34.55201056472828 36.0 36.0 36.0 32.0 36.0 33 34.51513235764134 36.0 36.0 36.0 32.0 36.0 34 34.47867737188335 36.0 36.0 36.0 32.0 36.0 35 34.402249921853326 36.0 36.0 36.0 32.0 36.0 36 34.354427667787064 36.0 36.0 36.0 32.0 36.0 37 34.29706449471588 36.0 36.0 36.0 32.0 36.0 38 34.21685088209159 36.0 36.0 36.0 32.0 36.0 39 34.09895827845505 36.0 36.0 36.0 32.0 36.0 40 34.03067739998104 36.0 36.0 36.0 32.0 36.0 41 34.01173429427404 36.0 36.0 36.0 32.0 36.0 42 33.862481165772806 36.0 36.0 36.0 32.0 36.0 43 33.901394698669925 36.0 36.0 36.0 32.0 36.0 44 33.86658869560026 36.0 36.0 36.0 32.0 36.0 45 33.69839772970733 36.0 36.0 36.0 27.0 36.0 46 33.796205759322284 36.0 36.0 36.0 32.0 36.0 47 33.71120500419709 36.0 36.0 36.0 27.0 36.0 48 33.68354634888189 36.0 36.0 36.0 27.0 36.0 49 33.712667839744874 36.0 36.0 36.0 27.0 36.0 50 33.13762420053315 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 1.0 21 16.0 22 63.0 23 208.0 24 523.0 25 1346.0 26 2885.0 27 5540.0 28 8844.0 29 12618.0 30 17288.0 31 22949.0 32 33350.0 33 47273.0 34 98446.0 35 318091.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.774503174589235 17.34177548672644 11.256048404801842 25.627672933882483 2 15.270706705279261 21.03256488654185 37.2196474639851 26.477080944193798 3 19.379633954881832 25.23330020125106 28.401511665888123 26.985554177978987 4 11.887664877186142 15.703525750782788 36.29905924954209 36.109750122488975 5 13.396623361114916 37.72113753463917 33.93567738241998 14.946561721825926 6 34.08617955566795 35.34285498534523 17.079090122032387 13.49187533695444 7 29.093568791905057 30.769244277731534 21.318589074918957 18.81859785544445 8 28.222540662613575 33.23218167960916 20.176945149813328 18.368332507963935 9 27.157814140860705 13.909757271153165 18.28649801033292 40.64593057765321 10 15.132533251850056 27.38786390887922 32.7366088205647 24.74299401870603 11 37.76223039396462 21.01039262997812 21.60167321693869 19.625703759118576 12 23.501252102935858 23.920434390157382 30.037475282820726 22.540838224086034 13 30.552014076938477 19.407946726795704 25.497592379908752 24.542446816357067 14 23.35409049560798 19.723343202643992 25.468967866788894 31.453598434959133 15 25.45948489925225 27.2154143881203 23.89180987703752 23.43329083558993 16 25.488460633391984 25.62543683114347 25.509885115604398 23.376217419860144 17 23.41572978459615 26.009321405867496 26.883334913827923 23.69161389570843 18 24.98744384853945 24.212825889203817 28.28277506752224 22.516955194734496 19 24.563344467039663 26.705968298790744 25.531836429346622 23.198850804822968 20 24.416358470221724 24.28991890306651 27.65672359959399 23.636999027117774 21 25.589261066096284 25.14847868615241 24.40792916574471 24.854331082006595 22 24.187537975772774 25.64159299805775 25.698315192767655 24.472553833401822 23 23.174265333431677 24.949160757373008 25.735720231384406 26.14085367781091 24 23.362695410594934 26.705968298790744 25.840384095307336 24.090952195306986 25 24.981297480691627 24.714018284566293 25.376421128051675 24.92826310669041 26 22.922966693710688 25.700071297867034 26.69595849972429 24.681003508697987 27 24.859072565774916 25.73730072597385 26.015467773715322 23.388158934535912 28 23.70267735783451 24.800594265965632 26.29381043196673 25.20291794423313 29 23.151787188159638 25.76399352348439 26.87297389374159 24.211245394614377 30 24.310114111709357 25.288089041552958 26.82854443472733 23.573252412010355 31 23.574832906599795 25.422431081655372 25.85987686191043 25.1428591498344 32 23.512139954552 25.850745115393664 26.02442390972215 24.612691020332182 33 23.063279491150986 25.194488639756113 26.54370418760822 25.198527681484684 34 23.62312579683269 26.04567278142462 27.144116521085554 23.187084900657133 35 24.874877511669318 25.591368392215536 26.418669504532506 23.115084591582637 36 23.466832442988046 26.65995834518704 25.97349686184019 23.89971234998472 37 24.9672486398966 25.88973064859986 26.08026805188237 23.06275265962117 38 24.102015657433064 25.754159334927877 25.458782457212497 24.68504255042656 39 24.157859799593286 25.325494080169708 26.291878716357413 24.22476740387959 40 25.294059798890846 25.66126137517078 25.446314111006917 23.598364714931456 41 22.906986137306344 25.74432514637136 27.206458252113475 24.142230464208822 42 25.564499984195056 26.398825516909536 25.856189041201738 22.18048545769367 43 24.169625703759117 24.573529876616057 26.03478492980848 25.222059489816345 44 23.507574081293615 25.739934883622915 26.734944032930485 24.017547002152984 45 24.107459583241138 25.884989164831534 25.864442735168815 24.14310851675851 46 23.278051144804916 25.113356584164848 26.94725713944528 24.661335131584956 47 24.485900232157093 24.88681902634509 26.997130524267615 23.6301502172302 48 24.336455688200026 27.018028174950214 24.73052567250045 23.914990464349312 49 23.066967311859678 25.94610162228989 27.1183017761247 23.86862928972573 50 23.214831361227304 27.37890777287239 24.470446507282567 24.935814358617733 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 13.0 2 12.0 3 66.5 4 121.0 5 145.5 6 170.0 7 154.5 8 139.0 9 199.5 10 260.0 11 352.0 12 444.0 13 746.5 14 1049.0 15 1478.0 16 1907.0 17 2237.0 18 2567.0 19 2778.5 20 2990.0 21 3357.5 22 3725.0 23 4037.5 24 4350.0 25 4587.0 26 4824.0 27 6135.0 28 7446.0 29 8510.5 30 9575.0 31 10367.5 32 11160.0 33 12768.0 34 14376.0 35 16690.5 36 19005.0 37 21196.0 38 23387.0 39 24505.0 40 25623.0 41 27016.0 42 28409.0 43 29692.0 44 30975.0 45 35895.0 46 40815.0 47 44658.0 48 48501.0 49 47685.5 50 46870.0 51 42674.5 52 38479.0 53 36655.0 54 34831.0 55 34948.5 56 35066.0 57 33805.5 58 32545.0 59 29688.5 60 26832.0 61 23783.0 62 20734.0 63 17929.0 64 15124.0 65 13002.0 66 10880.0 67 9414.5 68 7949.0 69 7435.5 70 6922.0 71 5349.0 72 3776.0 73 3435.0 74 3094.0 75 2187.5 76 1281.0 77 1216.5 78 1152.0 79 975.5 80 799.0 81 645.0 82 491.0 83 425.0 84 359.0 85 308.0 86 257.0 87 182.0 88 107.0 89 73.5 90 40.0 91 21.5 92 3.0 93 4.0 94 5.0 95 2.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013522009265210503 2 0.004390262748444969 3 7.02442039751195E-4 4 5.268315298133962E-4 5 0.0 6 5.268315298133962E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 569442.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.77921657924907 #Duplication Level Percentage of deduplicated Percentage of total 1 80.73049306379407 48.26005629410111 2 12.234103582953178 14.626902554766504 3 3.3948264903866487 6.088202040533866 4 1.25703480479221 3.0057822337331044 5 0.6280769688428339 1.8772974574447023 6 0.35234903140735824 1.2637889435993461 7 0.23987851121327805 1.0037824632168464 8 0.1618363723764367 0.7739561243752808 9 0.12238490172671833 0.6584466191716448 >10 0.7041886981300147 8.00732470258193 >50 0.09686393095841848 4.044841006950816 >100 0.07471515827636362 8.73563421232872 >500 0.0026578514801867377 1.0313355105475264 >1k 5.906336622637195E-4 0.6226498366486007 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1858 0.3262843274644301 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1669 0.2930939410861861 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 860 0.15102503854650692 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 716 0.12573712511546392 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 686 0.12046880981732995 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 669 0.11748343114838737 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 662 0.11625415757882279 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 619 0.10870290565149743 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 585 0.10273214831361228 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 1.7561050993779875E-4 0.0 19 0.0 0.0 0.0 3.512210198755975E-4 0.0 20 0.0 0.0 0.0 0.0010536630596267925 0.0 21 0.0 0.0 0.0 0.00140488407950239 0.0 22 0.0 0.0 0.0 0.0038634312186315726 0.0 23 0.0 0.0 0.0 0.007902472947200943 0.0 24 0.0 0.0 0.0 0.012292735695645913 0.0 25 0.0 0.0 0.0 0.014575672324837297 0.0 26 0.0 0.0 0.0 0.018263493033531072 0.0 27 0.0 0.0 0.0 0.02265375578197604 0.0 28 0.0 0.0 0.0 0.03090744974905258 0.0 29 0.0 0.0 0.0 0.0424977434049473 0.0 30 0.0 0.0 0.0 0.06831248836580371 0.0 31 0.0 0.0 0.0 0.11449805247944479 0.0 32 0.0 0.0 0.0 0.1699909736197892 0.0 33 0.0 0.0 0.0 0.21986435844212404 0.0 34 0.0 0.0 0.0 0.2816792579402292 0.0 35 0.0 0.0 0.0 0.3510454093656597 0.0 36 0.0 0.0 0.0 0.4513190105401428 0.0 37 0.0 0.0 0.0 0.5928610815500086 0.0 38 0.0 0.0 0.0 0.7568812978319126 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTACCC 40 7.027779E-4 27.499834 3 GATATAC 255 0.0 25.889019 1 GCTCTAA 55 1.5893966E-4 24.00618 1 GTATAGA 55 1.5893966E-4 24.00618 1 GTAATAG 55 1.59224E-4 23.999857 3 AATCCCG 180 0.0 23.222084 19 TAGGACG 210 0.0 23.047482 4 TTAACGA 165 0.0 22.66653 12 CTAGACA 130 6.730261E-11 21.999868 4 TATTGGG 50 0.0025788671 21.999868 2 CGCAATA 170 0.0 21.999868 36 GTTATGA 50 0.0025788671 21.999868 34 ATACACT 310 0.0 21.999866 4 TACGCTA 165 0.0 21.333204 9 TGTAGGA 330 0.0 21.333204 2 TGGTCGG 165 0.0 21.333204 37 GACGTGG 125 9.931682E-10 21.119873 7 CGAATGT 220 0.0 20.999874 33 ATCCCGT 200 0.0 20.899874 20 ACGCTAT 170 0.0 20.70576 10 >>END_MODULE