##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062495_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1373043 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09688261766019 32.0 32.0 32.0 32.0 32.0 2 30.81372469762418 32.0 32.0 32.0 32.0 32.0 3 30.798154901193918 32.0 32.0 32.0 32.0 32.0 4 30.84900691384028 32.0 32.0 32.0 32.0 32.0 5 30.690166294864763 32.0 32.0 32.0 32.0 32.0 6 34.30451777548117 36.0 36.0 36.0 32.0 36.0 7 34.17372507634502 36.0 36.0 36.0 32.0 36.0 8 34.158280549116085 36.0 36.0 36.0 32.0 36.0 9 34.305394659890474 36.0 36.0 36.0 32.0 36.0 10 34.01244971934601 36.0 36.0 36.0 32.0 36.0 11 34.303785096315266 36.0 36.0 36.0 32.0 36.0 12 34.09774056602743 36.0 36.0 36.0 32.0 36.0 13 34.21367721185717 36.0 36.0 36.0 32.0 36.0 14 34.13250568263339 36.0 36.0 36.0 32.0 36.0 15 34.084767192287494 36.0 36.0 36.0 32.0 36.0 16 34.08135724809784 36.0 36.0 36.0 32.0 36.0 17 34.01032014292342 36.0 36.0 36.0 32.0 36.0 18 34.04068627129667 36.0 36.0 36.0 32.0 36.0 19 34.00251776528484 36.0 36.0 36.0 32.0 36.0 20 33.98679283897154 36.0 36.0 36.0 32.0 36.0 21 33.95882794639352 36.0 36.0 36.0 32.0 36.0 22 33.91929386042535 36.0 36.0 36.0 32.0 36.0 23 33.89613435267504 36.0 36.0 36.0 32.0 36.0 24 33.873065155279185 36.0 36.0 36.0 32.0 36.0 25 33.43844366126917 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 5.0 4 56.0 5 156.0 6 238.0 7 49.0 8 198.0 9 246.0 10 168.0 11 50.0 12 95.0 13 89.0 14 240.0 15 283.0 16 440.0 17 614.0 18 908.0 19 1351.0 20 2169.0 21 3162.0 22 4654.0 23 6852.0 24 9105.0 25 12632.0 26 16829.0 27 21353.0 28 28625.0 29 37810.0 30 48871.0 31 66181.0 32 95008.0 33 136368.0 34 305945.0 35 572292.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.73546068037715 17.535827054114787 10.813779440096436 25.914932825411626 2 17.035544219421205 20.28158899456225 36.81458185541962 25.86828493059693 3 19.519348915599817 24.096503130801743 28.2467728742996 28.13737507929883 4 12.735811260666047 15.0346660217626 35.88038874894924 36.34913396862211 5 14.757176298815553 36.41266295529672 33.15067914281489 15.679481603072846 6 33.75410687754892 35.42950160777561 16.957824763023417 13.85856675165204 7 29.803074142366754 30.495448549293414 20.88631212238264 18.815165185957188 8 28.202004827272997 32.303583131225 19.85757284830247 19.63683919319954 9 27.75101060359188 13.7766502272719 18.78129772801003 39.69104144112619 10 16.244583133721402 26.266159451834643 31.251389991767603 26.237867422676352 11 37.62955757555429 20.984571947749668 22.25123560046026 19.134634876235783 12 24.840890212605828 23.668214433392674 28.81004767277095 22.68084768123055 13 29.776116192363755 19.44047642485932 25.38207835750969 25.401329025267234 14 23.5352368618323 19.881532623374955 24.944361314560563 31.63886920023218 15 25.306495055684614 27.437851537834472 22.35689484452494 24.89875856195597 16 25.488313220421038 25.7021655740729 24.286642357640172 24.522878847865886 17 23.638930453830827 25.80176585374391 25.446713744432486 25.11258994799278 18 24.659494234902123 24.451220001327236 27.1223953870466 23.766890376724042 19 25.63426030251385 24.640052857152234 25.536976305439662 24.188710534894252 20 25.612421166383864 24.1636837073912 25.50377314877268 24.720121977452255 21 26.73375343388813 23.922322478831497 24.529210017947012 24.814714069333366 22 25.790703679228354 24.56859767438807 25.02235604240427 24.6183426039793 23 24.300656969654536 24.294822425653322 25.74798854095558 25.65653206373656 24 24.627022958772518 25.081443439564115 25.55956583919014 24.731967762473225 25 24.645014968040226 24.683009360038795 25.57248651782491 25.099489154096066 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 187.0 1 187.0 2 560.0 3 933.0 4 933.0 5 933.0 6 2609.0 7 4285.0 8 4285.0 9 4285.0 10 4409.5 11 4534.0 12 4534.0 13 4534.0 14 4275.0 15 4016.0 16 4016.0 17 4016.0 18 6893.5 19 9771.0 20 9771.0 21 9771.0 22 15580.5 23 21390.0 24 21390.0 25 21390.0 26 32231.5 27 43073.0 28 43073.0 29 43073.0 30 54265.5 31 65458.0 32 65458.0 33 65458.0 34 77211.5 35 88965.0 36 88965.0 37 88965.0 38 98963.5 39 108962.0 40 108962.0 41 108962.0 42 123528.5 43 138095.0 44 138095.0 45 138095.0 46 157880.0 47 177665.0 48 177665.0 49 177665.0 50 177376.5 51 177088.0 52 177088.0 53 177088.0 54 161669.5 55 146251.0 56 146251.0 57 146251.0 58 135247.0 59 124243.0 60 124243.0 61 124243.0 62 112639.5 63 101036.0 64 101036.0 65 101036.0 66 85262.5 67 69489.0 68 69489.0 69 69489.0 70 53507.5 71 37526.0 72 37526.0 73 37526.0 74 30303.0 75 23080.0 76 23080.0 77 23080.0 78 18968.5 79 14857.0 80 14857.0 81 14857.0 82 10774.5 83 6692.0 84 6692.0 85 6692.0 86 5064.5 87 3437.0 88 3437.0 89 3437.0 90 2313.0 91 1189.0 92 1189.0 93 1189.0 94 706.0 95 223.0 96 223.0 97 223.0 98 410.5 99 598.0 100 598.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009322359168649489 2 0.0035687156192486325 3 0.005243827032365337 4 0.016678283200161976 5 0.03670678922655736 6 0.04734010515329819 7 0.06940787724783565 8 0.09132998748036296 9 0.09744778568478919 10 0.11886007940028098 11 0.11980688150334694 12 0.1325522944292349 13 0.1210450073304332 14 0.12344842805360064 15 0.1142717307469613 16 0.11186831002379387 17 0.12344842805360064 18 0.1292020716030015 19 0.13109567580913342 20 0.11958838871033173 21 0.12993038091305226 22 0.1492305776293969 23 0.13830593797863577 24 0.13444589863536685 25 0.13022170463707256 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1373043.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.03971388432428 #Duplication Level Percentage of deduplicated Percentage of total 1 76.99618960022418 37.75871108178179 2 13.486816587785583 13.227792533507273 3 4.146484341298582 6.100272171693398 4 1.697625452276539 3.3300426584955223 5 0.8821170693427964 2.1629384346524687 6 0.5804067567963606 1.7077788773893265 7 0.3751840237924971 1.28792420265275 8 0.2645624391144602 1.0379253054969673 9 0.20621864627700137 0.9101613069933141 >10 1.130728067950562 10.29904541436586 >50 0.10877498638051698 3.729901555650749 >100 0.10807106972404959 11.125139677349472 >500 0.012652933788828426 4.105495206770974 >1k 0.004168025248084658 3.2168715732001516 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4495 0.3273750348678082 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2940 0.21412293715491795 No Hit TATCAACGCAGAGTACTTTTTTTTT 2875 0.20938892663958814 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2280 0.16605452269156903 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1828 0.1331349418772755 No Hit GTACATGGAAGCAGTGGTATCAACG 1786 0.1300760427750624 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1582 0.11521853285002728 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1548 0.11274228119585476 No Hit TCCATGTACTCTGCGTTGATACCAC 1546 0.11259661933384461 No Hit GAATAACGCCGCCGCATCGCCAGTC 1517 0.11048452233469745 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1490 0.10851808719756047 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1435 0.10451238599228138 No Hit GAATAGGACCGCGGTTCTATTTTGT 1416 0.10312859830318498 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 7.283093100507413E-5 0.0 8 0.0 0.0 0.0 7.283093100507413E-5 0.0 9 0.0 0.0 0.0 2.184927930152224E-4 0.0 10 0.0 0.0 0.0 2.184927930152224E-4 1.4566186201014827E-4 11 0.0 0.0 0.0 2.184927930152224E-4 1.4566186201014827E-4 12 0.0 0.0 0.0 2.184927930152224E-4 2.9132372402029653E-4 13 0.0 0.0 0.0 2.184927930152224E-4 2.9132372402029653E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 250 0.0 13.677899 5 CGCGTAT 50 0.0014978291 13.301839 7 ATAACGA 110 2.737579E-9 12.956808 12 CAAGACG 260 0.0 12.7851 4 AGTCCGG 60 4.0867133E-4 12.668418 10 TACACCG 75 1.4806179E-5 12.664722 5 TTAGAGT 165 0.0 12.663338 4 CGGTCCA 250 0.0 12.541733 10 GAACAGT 245 0.0 12.408521 6 AGGCCCG 295 0.0 12.238979 10 GGTCCAA 280 0.0 12.215974 11 GCGTTAT 140 5.2750693E-11 12.20618 1 TAATACC 55 0.0030741773 12.08773 4 GTTATTC 160 3.6379788E-12 11.871013 3 CGCCAGT 265 0.0 11.833118 18 CTATAGC 65 8.04008E-4 11.689234 4 GAGTACG 65 8.0671697E-4 11.684548 1 ATATACG 205 0.0 11.585699 6 TCGCCAG 280 0.0 11.538151 17 ATCGCCA 265 0.0 11.473702 16 >>END_MODULE