##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062495_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1373043 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23381933413593 32.0 32.0 32.0 32.0 32.0 2 31.38941970499103 32.0 32.0 32.0 32.0 32.0 3 31.478283637147563 32.0 32.0 32.0 32.0 32.0 4 31.58248357844583 32.0 32.0 32.0 32.0 32.0 5 31.51428105310613 32.0 32.0 32.0 32.0 32.0 6 35.09455057124941 36.0 36.0 36.0 36.0 36.0 7 35.10067710916555 36.0 36.0 36.0 36.0 36.0 8 35.043526677605875 36.0 36.0 36.0 36.0 36.0 9 35.16700642295981 36.0 36.0 36.0 36.0 36.0 10 35.03646499053562 36.0 36.0 36.0 36.0 36.0 11 35.17202811565261 36.0 36.0 36.0 36.0 36.0 12 35.076869406129305 36.0 36.0 36.0 36.0 36.0 13 35.12264364626599 36.0 36.0 36.0 36.0 36.0 14 35.085074538816336 36.0 36.0 36.0 36.0 36.0 15 35.04977629979542 36.0 36.0 36.0 36.0 36.0 16 35.06433374628471 36.0 36.0 36.0 36.0 36.0 17 35.03038506441532 36.0 36.0 36.0 36.0 36.0 18 35.055080576500515 36.0 36.0 36.0 36.0 36.0 19 35.024182054021615 36.0 36.0 36.0 36.0 36.0 20 35.005871629657626 36.0 36.0 36.0 36.0 36.0 21 34.991569091426854 36.0 36.0 36.0 36.0 36.0 22 34.98616867789283 36.0 36.0 36.0 36.0 36.0 23 34.94934608748597 36.0 36.0 36.0 32.0 36.0 24 34.93063217976422 36.0 36.0 36.0 32.0 36.0 25 34.90676548367385 36.0 36.0 36.0 32.0 36.0 26 34.858817968555975 36.0 36.0 36.0 32.0 36.0 27 34.84533914815486 36.0 36.0 36.0 32.0 36.0 28 34.82464933727494 36.0 36.0 36.0 32.0 36.0 29 34.79515790838306 36.0 36.0 36.0 32.0 36.0 30 34.78597829783918 36.0 36.0 36.0 32.0 36.0 31 34.783625130458404 36.0 36.0 36.0 32.0 36.0 32 34.7380162165351 36.0 36.0 36.0 32.0 36.0 33 34.71201703078491 36.0 36.0 36.0 32.0 36.0 34 34.69229295805011 36.0 36.0 36.0 32.0 36.0 35 34.65717388311946 36.0 36.0 36.0 32.0 36.0 36 34.62905677389565 36.0 36.0 36.0 32.0 36.0 37 34.61488897288723 36.0 36.0 36.0 32.0 36.0 38 34.57164123774711 36.0 36.0 36.0 32.0 36.0 39 34.54800905725458 36.0 36.0 36.0 32.0 36.0 40 34.54316798527067 36.0 36.0 36.0 32.0 36.0 41 34.50580935921162 36.0 36.0 36.0 32.0 36.0 42 34.46664525437295 36.0 36.0 36.0 32.0 36.0 43 34.459228880668704 36.0 36.0 36.0 32.0 36.0 44 34.410332378519826 36.0 36.0 36.0 32.0 36.0 45 34.3563093071375 36.0 36.0 36.0 32.0 36.0 46 34.34049261385113 36.0 36.0 36.0 32.0 36.0 47 34.312073984572955 36.0 36.0 36.0 32.0 36.0 48 34.264492809038025 36.0 36.0 36.0 32.0 36.0 49 34.241704739035846 36.0 36.0 36.0 32.0 36.0 50 33.711883021871856 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 7.0 21 39.0 22 120.0 23 419.0 24 954.0 25 2314.0 26 4686.0 27 8756.0 28 15298.0 29 23145.0 30 33623.0 31 47800.0 32 69912.0 33 113118.0 34 241179.0 35 811673.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.35541498613447 18.20335963182596 11.26491354713515 26.17631183490442 2 16.50162492552728 20.847772664834164 36.38085166199801 26.269750747640547 3 18.938801907892962 24.374796527104593 28.57294762762439 28.113453937378054 4 12.499763299301843 15.539510080536504 35.99620404911139 35.96452257105027 5 14.497652294939051 36.737014062924466 32.92839335694512 15.836940285191359 6 34.0364710029453 35.66170151401711 16.60517277041534 13.696654712622248 7 29.912100349369975 30.49613158509967 20.79075455029449 18.80101351523587 8 28.320307521323073 32.496141781430005 19.673819392400674 19.50973130484624 9 27.917261149140998 13.560172551041738 18.63714392047445 39.88542237934281 10 16.20510064142201 26.36530684035387 31.203756910744968 26.225835607479155 11 37.967274149462185 20.774149098025337 22.133319932442028 19.125256820070458 12 24.906357630460228 23.598459771471106 28.698591376963428 22.79659122110524 13 29.979833115204695 19.248705248124057 25.413188079324538 25.35827355734671 14 23.696927190189964 19.742717453131476 24.89623413105052 31.66412122562804 15 25.55229515754423 27.34116848489086 22.23841496588235 24.868121391682564 16 25.802105250891632 25.552222326613222 24.101284519130136 24.54438790336501 17 23.89204125435256 25.7743566661787 25.253615509492423 25.07998656997632 18 24.90970785328646 24.46289009157033 26.980946700139764 23.646455355003447 19 25.810699300750233 24.64875462749528 25.344508511386753 24.19603756036774 20 25.799410506444442 24.0648690536276 25.346839101178915 24.788881338749043 21 26.968492610937894 23.885195146838083 24.334489160208385 24.811823082015643 22 25.927447283151366 24.508190930655484 24.951148653028348 24.613213133164802 23 24.447741257921273 24.21774117780725 25.615949391242665 25.71856817302881 24 24.861275284168087 25.004606556386072 25.374514854960843 24.759603304485 25 24.88144945205649 24.507462621345436 25.488568092914786 25.12251983368329 26 24.13209200294528 25.403938551086892 26.07500274936764 24.38896669660018 27 25.257694041628703 24.837313907867415 25.255946099284582 24.649045951219296 28 24.25838083730808 24.731490565117042 25.81273856681837 25.1973900307565 29 24.33485331486341 24.760331613795053 25.587545328150686 25.317269743190856 30 24.133330128772368 25.169714276974574 25.9451451993856 24.75181039486746 31 24.960762335921018 24.805486791018197 24.849622335207272 25.384128537853513 32 24.454004717987708 25.1701512625606 24.93942287313653 25.43642114631516 33 24.298583511222883 24.51023019672363 25.72366633819917 25.46751995385432 34 24.914951680318826 24.724644457602565 25.982288974198188 24.37811488788042 35 25.543701107685628 24.702649516439035 25.59031290352888 24.163336472346458 36 24.241047075728876 25.350917633315202 25.21909364819601 25.188941642759914 37 25.252158890872316 25.01808027862201 24.928425402554762 24.80133542795091 38 24.52749112737183 24.931265808863962 25.402263439673778 25.138979624090435 39 25.082462821630497 24.336528426276526 25.219821957506067 25.361186794586914 40 25.45899873492673 24.639796422981654 25.633865800269913 24.267339041821707 41 24.216138897325138 24.90941652956244 26.353144074876024 24.5213004982364 42 25.426661801560474 25.462640281476983 25.507504134976106 23.603193781986434 43 24.36871969778077 24.28219655174674 25.917178121879648 25.431905628592844 44 23.84295320685514 25.06017655674294 25.62133888013704 25.47553135626488 45 24.07433707465826 25.201177239168764 25.606918355798037 25.11756733037494 46 23.931640738798578 24.634679251879042 25.76712987239993 25.66655013692245 47 24.38954934404822 24.51154115348172 26.052789315411097 25.04612018705896 48 24.713428494227784 25.386604789507683 25.034612899960162 24.86535381630437 49 23.90150927538322 25.240505941911508 25.616896193345728 25.241088589359546 50 23.75930507537648 25.93440399813261 25.046884980128052 25.259405946362858 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 22.5 2 26.0 3 93.5 4 161.0 5 181.0 6 201.0 7 207.5 8 214.0 9 324.0 10 434.0 11 616.5 12 799.0 13 1363.0 14 1927.0 15 2842.0 16 3757.0 17 4533.0 18 5309.0 19 5884.0 20 6459.0 21 7285.0 22 8111.0 23 8527.5 24 8944.0 25 9709.5 26 10475.0 27 12780.0 28 15085.0 29 17325.5 30 19566.0 31 22182.5 32 24799.0 33 29069.0 34 33339.0 35 38412.5 36 43486.0 37 49618.5 38 55751.0 39 58383.0 40 61015.0 41 64721.0 42 68427.0 43 69387.5 44 70348.0 45 77008.0 46 83668.0 47 89332.5 48 94997.0 49 97693.0 50 100389.0 51 95942.0 52 91495.0 53 89326.5 54 87158.0 55 89120.0 56 91082.0 57 89008.0 58 86934.0 59 79945.5 60 72957.0 61 65043.5 62 57130.0 63 50388.0 64 43646.0 65 38619.0 66 33592.0 67 29656.5 68 25721.0 69 23782.0 70 21843.0 71 17595.0 72 13347.0 73 12271.0 74 11195.0 75 8364.0 76 5533.0 77 4995.5 78 4458.0 79 3978.5 80 3499.0 81 2834.0 82 2169.0 83 1953.0 84 1737.0 85 1396.5 86 1056.0 87 798.5 88 541.0 89 355.0 90 169.0 91 107.5 92 46.0 93 28.5 94 11.0 95 10.0 96 9.0 97 7.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015585819235085865 2 0.004151363067289225 3 7.283093100507413E-4 4 7.283093100507413E-5 5 0.0 6 5.09816517035519E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.184927930152224E-4 47 0.0 48 0.0 49 0.0 50 1.4566186201014827E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1373043.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.87263716888048 #Duplication Level Percentage of deduplicated Percentage of total 1 78.14226693267243 42.09729994017668 2 13.215139195984335 14.238687980830298 3 3.875282161039207 6.263150093661007 4 1.5773101397773739 3.3989542745209045 5 0.809038979127425 2.179253168900661 6 0.495459151836452 1.6015014671331862 7 0.3208638876123849 1.2100048658556914 8 0.24115664083504507 1.0393395370057927 9 0.18244464118834738 0.8845896562331782 >10 0.9573396345842901 9.420061059880867 >50 0.08696883847382991 3.259212480341041 >100 0.08587655097198835 9.784997355837325 >500 0.008818262291243188 3.24234182459097 >1k 0.002034983605671505 1.380606295032424 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1537 0.11194114095479893 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1489 0.10844525626655538 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1463 0.10655165206042345 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1422 0.10356558388921543 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1409 0.10261878178614944 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1376 0.10021536106298201 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 2.9132372402029653E-4 13 0.0 0.0 0.0 0.0 2.9132372402029653E-4 14 0.0 0.0 0.0 0.0 2.9132372402029653E-4 15 0.0 0.0 0.0 0.0 2.9132372402029653E-4 16 0.0 0.0 0.0 0.0 2.9132372402029653E-4 17 0.0 0.0 0.0 7.283093100507413E-5 2.9132372402029653E-4 18 0.0 0.0 0.0 2.9132372402029653E-4 2.9132372402029653E-4 19 0.0 0.0 0.0 3.6415465502537064E-4 2.9132372402029653E-4 20 0.0 0.0 0.0 5.826474480405931E-4 5.09816517035519E-4 21 0.0 0.0 0.0 7.283093100507413E-4 5.09816517035519E-4 22 0.0 0.0 0.0 0.0013837876890964084 5.09816517035519E-4 23 0.0 0.0 0.0 0.002184927930152224 5.09816517035519E-4 24 0.0 0.0 0.0 0.0039328702742740035 5.09816517035519E-4 25 0.0 0.0 0.0 0.005243827032365337 5.09816517035519E-4 26 0.0 0.0 0.0 0.0068461075144769686 5.09816517035519E-4 27 0.0 0.0 0.0 0.009613682892669785 5.09816517035519E-4 28 0.0 0.0 0.0 0.017770747165238087 5.09816517035519E-4 29 0.0 0.0 0.0 0.03685245108856751 5.09816517035519E-4 30 0.0 0.0 0.0 0.07924005293352065 5.09816517035519E-4 31 0.0 0.0 0.0 0.15971823169412758 5.09816517035519E-4 32 0.0 0.0 0.0 0.25155803569152607 5.09816517035519E-4 33 0.0 0.0 0.0 0.34609258413611227 5.09816517035519E-4 34 0.0 0.0 0.0 0.45504765691970317 5.09816517035519E-4 35 0.0 0.0 0.0 0.5752915240090806 5.09816517035519E-4 36 0.0 0.0 0.0 0.74666270466402 5.09816517035519E-4 37 0.0 0.0 0.0 0.9877330862908154 5.09816517035519E-4 38 0.0 0.0 0.0 1.297774359579416 5.09816517035519E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTTACG 65 4.9304566E-4 20.309021 2 TAGGACG 600 0.0 20.166517 4 GATATAC 465 0.0 19.875164 1 GTAGGAC 795 0.0 19.094893 3 GTCCTAA 450 0.0 19.070692 1 TGTAGGA 755 0.0 18.941637 2 TCCTACA 790 0.0 18.10245 2 TAGGACC 805 0.0 18.037134 4 ATACACT 535 0.0 17.68211 4 TTTACGG 75 0.0012907409 17.60051 3 CGAATGC 515 0.0 17.514433 43 ATACGAA 490 0.0 17.510075 40 ATAATAC 140 8.371717E-8 17.286215 3 CGCAATA 510 0.0 17.254772 36 AATCCCG 310 0.0 17.03213 19 CGTCTTA 195 4.9112714E-11 16.92295 15 AGGACGT 625 0.0 16.895874 5 CTACGAC 475 0.0 16.67356 4 GACGGTA 450 0.0 16.622099 8 CGACGGT 480 0.0 16.499876 7 >>END_MODULE