##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062494_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 756605 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20854474924168 32.0 32.0 32.0 32.0 32.0 2 31.33422723878378 32.0 32.0 32.0 32.0 32.0 3 31.455864024160558 32.0 32.0 32.0 32.0 32.0 4 31.573270068265476 32.0 32.0 32.0 32.0 32.0 5 31.504709855208464 32.0 32.0 32.0 32.0 32.0 6 35.08191196198809 36.0 36.0 36.0 36.0 36.0 7 35.0900086570932 36.0 36.0 36.0 36.0 36.0 8 35.02953720897958 36.0 36.0 36.0 36.0 36.0 9 35.17067294030571 36.0 36.0 36.0 36.0 36.0 10 35.03991646896333 36.0 36.0 36.0 36.0 36.0 11 35.176969488702824 36.0 36.0 36.0 36.0 36.0 12 35.07904653022383 36.0 36.0 36.0 36.0 36.0 13 35.12757118972251 36.0 36.0 36.0 36.0 36.0 14 35.09129598667733 36.0 36.0 36.0 36.0 36.0 15 35.04725186854435 36.0 36.0 36.0 36.0 36.0 16 35.061482543731536 36.0 36.0 36.0 36.0 36.0 17 35.03220042162027 36.0 36.0 36.0 36.0 36.0 18 35.03547293501893 36.0 36.0 36.0 36.0 36.0 19 35.0228362223353 36.0 36.0 36.0 36.0 36.0 20 35.01868478268052 36.0 36.0 36.0 36.0 36.0 21 35.010518037813654 36.0 36.0 36.0 36.0 36.0 22 34.98903390804978 36.0 36.0 36.0 36.0 36.0 23 34.95324905333695 36.0 36.0 36.0 32.0 36.0 24 34.92706498106674 36.0 36.0 36.0 32.0 36.0 25 34.90417853437395 36.0 36.0 36.0 32.0 36.0 26 34.8496150567337 36.0 36.0 36.0 32.0 36.0 27 34.8333793723277 36.0 36.0 36.0 32.0 36.0 28 34.82003026678386 36.0 36.0 36.0 32.0 36.0 29 34.793600359500665 36.0 36.0 36.0 32.0 36.0 30 34.77509797053945 36.0 36.0 36.0 32.0 36.0 31 34.77462612591775 36.0 36.0 36.0 32.0 36.0 32 34.72693413339854 36.0 36.0 36.0 32.0 36.0 33 34.700808215647534 36.0 36.0 36.0 32.0 36.0 34 34.68545013580402 36.0 36.0 36.0 32.0 36.0 35 34.64427144943531 36.0 36.0 36.0 32.0 36.0 36 34.619639045472866 36.0 36.0 36.0 32.0 36.0 37 34.59041904296165 36.0 36.0 36.0 32.0 36.0 38 34.558796201452544 36.0 36.0 36.0 32.0 36.0 39 34.53949154446508 36.0 36.0 36.0 32.0 36.0 40 34.52153765835541 36.0 36.0 36.0 32.0 36.0 41 34.48898170115186 36.0 36.0 36.0 32.0 36.0 42 34.43200613265839 36.0 36.0 36.0 32.0 36.0 43 34.44274224991904 36.0 36.0 36.0 32.0 36.0 44 34.39865583759029 36.0 36.0 36.0 32.0 36.0 45 34.336101400334385 36.0 36.0 36.0 32.0 36.0 46 34.35049464383661 36.0 36.0 36.0 32.0 36.0 47 34.315715597967234 36.0 36.0 36.0 32.0 36.0 48 34.27770765458859 36.0 36.0 36.0 32.0 36.0 49 34.25465203111267 36.0 36.0 36.0 32.0 36.0 50 33.72479827651152 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 19.0 22 60.0 23 180.0 24 551.0 25 1268.0 26 2677.0 27 5019.0 28 8417.0 29 12640.0 30 18151.0 31 26047.0 32 39035.0 33 63117.0 34 136014.0 35 443400.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.16665036338689 17.496503607431123 11.081647706392912 26.255198322789074 2 16.435556930185957 20.479613834597597 36.11035109910953 26.974478136106917 3 18.954111876669476 24.133327870304164 28.259544991349472 28.653015261676895 4 12.225533799010051 15.256441604271714 35.78379735793445 36.73422723878378 5 14.350024120908532 36.6697285902155 33.350427237462085 15.629820051413882 6 34.979421148767784 35.09612715800381 16.315447223242867 13.609004469985543 7 30.42525492165661 30.28991349515269 20.67974702784148 18.605084555349226 8 28.52518817612889 32.45471547240634 19.45308318078786 19.567013170676905 9 27.34584096060692 13.766628557834009 18.214391921808605 40.67313855975046 10 15.686388538272944 26.389595627837508 31.725140595158635 26.198875238730913 11 38.08988838297394 20.845883915649512 21.647491095089247 19.416736606287298 12 24.474990252509564 23.714223405872286 28.6421580613398 23.16862828027835 13 29.697926923559848 19.181342972885457 25.361846670323352 25.758883433231343 14 23.4674632073539 19.523000773190766 24.91471771928549 32.094818300169834 15 25.436786698475427 26.87637538742144 22.377594649784232 25.309243264318898 16 26.072256990107125 25.642045717382256 23.573595204895554 24.71210208761507 17 24.03658447935184 25.598826336067038 25.345193330734002 25.019395853847122 18 25.272764520456516 24.48820718869159 26.24288763621705 23.99614065463485 19 25.553888753048152 25.211966614019204 25.131739811394322 24.10240482153832 20 25.255714672781703 24.240389635278646 25.51185889598932 24.99203679595033 21 26.726098823031837 24.20391089141626 24.29920500128865 24.770785284263255 22 25.418679495906055 24.439965371627203 25.095525406255575 25.045829726211167 23 24.43956886354174 24.07491359427971 25.418150818458773 26.067366723719775 24 24.483581261027883 25.232320695739517 25.307260723891595 24.976837319341 25 25.116672504146813 24.306077808103304 25.276333093225663 25.300916594524224 26 24.53750636065054 25.123941819046923 25.778576668142556 24.55997515215998 27 25.3889413894965 24.8736130477594 25.072527937298855 24.664917625445245 28 24.58416214537308 24.357095181765914 25.849419446078205 25.2093232267828 29 24.428863145234303 24.865682886050188 25.7364146417219 24.96903932699361 30 24.603723210922475 24.96269519762624 25.925548998486658 24.508032592964625 31 24.836737795811555 24.803034608547392 24.90269030735985 25.457537288281202 32 24.619583534340904 24.901104275018007 24.962563028264416 25.516749162376666 33 24.24831979698786 24.51107248828649 25.47921306361972 25.761394651105928 34 24.81175778642753 24.732984846782667 25.951322024041605 24.5039353427482 35 25.699010712326775 24.39965371627203 25.464145756372215 24.43718981502898 36 24.523232069573954 25.247520172348846 25.126188698197872 25.103059059879328 37 25.638873652698567 24.78096232512341 25.104645092221173 24.475518929956845 38 24.57279558025654 24.658705665439694 25.37664963884722 25.391849115456544 39 25.00908664362514 24.558653458541777 25.08019376028443 25.352066137548658 40 25.469829038930484 24.703643248458576 25.381936413320027 24.44459129929091 41 24.096060692170948 25.183946709313314 25.904269731233605 24.815722867282137 42 25.688172824657517 25.1655751680203 25.265891713641857 23.880360293680322 43 24.66571064161617 24.212237561210937 25.499434975978218 25.622616821194676 44 24.37031211794794 24.85695970817005 25.45383654615024 25.318891627731777 45 24.431374363108887 25.07556783262072 25.298537546011456 25.194520258258933 46 24.329403927819477 24.872357101412497 25.38107831980576 25.417160650962263 47 24.6404662935085 24.495212164868065 25.878893213764115 24.985428327859317 48 25.34334295966852 25.48978661256534 24.50076327806451 24.666107149701627 49 24.17364410755943 25.32047766007362 25.51741000918577 24.988468223181183 50 24.184481995228683 25.68420774380291 24.749109508924736 25.382200752043673 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 23.5 2 23.0 3 95.5 4 168.0 5 176.5 6 185.0 7 165.0 8 145.0 9 196.0 10 247.0 11 344.0 12 441.0 13 762.0 14 1083.0 15 1478.0 16 1873.0 17 2226.0 18 2579.0 19 2781.5 20 2984.0 21 3534.5 22 4085.0 23 4242.5 24 4400.0 25 4978.5 26 5557.0 27 7007.5 28 8458.0 29 9356.0 30 10254.0 31 10894.0 32 11534.0 33 13394.0 34 15254.0 35 17420.5 36 19587.0 37 23565.5 38 27544.0 39 29626.0 40 31708.0 41 34858.0 42 38008.0 43 38900.0 44 39792.0 45 44334.0 46 48876.0 47 52245.5 48 55615.0 49 56321.0 50 57027.0 51 54608.5 52 52190.0 53 51798.0 54 51406.0 55 52287.5 56 53169.0 57 52037.5 58 50906.0 59 46723.5 60 42541.0 61 37770.5 62 33000.0 63 28734.5 64 24469.0 65 21364.0 66 18259.0 67 15771.0 68 13283.0 69 12189.0 70 11095.0 71 8595.5 72 6096.0 73 5558.0 74 5020.0 75 3672.5 76 2325.0 77 2165.0 78 2005.0 79 1691.5 80 1378.0 81 1100.5 82 823.0 83 684.5 84 546.0 85 457.0 86 368.0 87 280.0 88 192.0 89 121.0 90 50.0 91 33.0 92 16.0 93 11.5 94 7.0 95 6.0 96 5.0 97 4.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014670799162046246 2 0.005022435749168985 3 5.286774472809459E-4 4 0.0 5 0.0 6 3.9650808546070937E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.6433872364047293E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 756605.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.233139727037646 #Duplication Level Percentage of deduplicated Percentage of total 1 80.6443685926668 47.76819153048158 2 12.247917896429978 14.509652642490437 3 3.3745631129194127 5.99657905155788 4 1.2718104934507823 3.0133331465953157 5 0.652538187179835 1.9325942809225505 6 0.3957320477421385 1.4064271007026092 7 0.2424646983241272 1.005336174829494 8 0.17137904298002232 0.8121055039297321 9 0.12418072009150523 0.6620052550125852 >10 0.7021717194335373 7.91194313102872 >50 0.08666099236774033 3.699878670635828 >100 0.08083821092420751 9.230544538983562 >500 0.005374285489991496 2.0514089728297455 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 894 0.11815940946729138 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 799 0.10560332009436893 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 784 0.10362077966706539 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 783 0.10348861030524514 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 773 0.10216691668704278 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3216936182023644E-4 2 0.0 0.0 0.0 0.0 1.3216936182023644E-4 3 0.0 0.0 0.0 0.0 1.3216936182023644E-4 4 0.0 0.0 0.0 0.0 1.3216936182023644E-4 5 0.0 0.0 0.0 0.0 1.3216936182023644E-4 6 0.0 0.0 0.0 0.0 1.3216936182023644E-4 7 0.0 0.0 0.0 0.0 1.3216936182023644E-4 8 0.0 0.0 0.0 0.0 1.3216936182023644E-4 9 0.0 0.0 0.0 0.0 1.3216936182023644E-4 10 1.3216936182023644E-4 0.0 0.0 0.0 1.3216936182023644E-4 11 1.3216936182023644E-4 0.0 0.0 0.0 1.3216936182023644E-4 12 1.3216936182023644E-4 0.0 0.0 0.0 3.9650808546070937E-4 13 1.3216936182023644E-4 0.0 0.0 0.0 3.9650808546070937E-4 14 1.3216936182023644E-4 0.0 0.0 0.0 3.9650808546070937E-4 15 1.3216936182023644E-4 0.0 0.0 0.0 3.9650808546070937E-4 16 1.3216936182023644E-4 0.0 0.0 0.0 3.9650808546070937E-4 17 1.3216936182023644E-4 0.0 0.0 0.0 3.9650808546070937E-4 18 1.3216936182023644E-4 0.0 0.0 5.286774472809458E-4 6.608468091011823E-4 19 1.3216936182023644E-4 0.0 0.0 6.608468091011823E-4 6.608468091011823E-4 20 1.3216936182023644E-4 0.0 0.0 7.930161709214187E-4 9.251855327416552E-4 21 1.3216936182023644E-4 0.0 0.0 0.0013216936182023646 9.251855327416552E-4 22 1.3216936182023644E-4 0.0 0.0 0.0025112178745844926 9.251855327416552E-4 23 1.3216936182023644E-4 0.0 0.0 0.004229419578247566 9.251855327416552E-4 24 1.3216936182023644E-4 0.0 0.0 0.0077979923473939505 9.251855327416552E-4 25 1.3216936182023644E-4 0.0 0.0 0.01004487149833797 9.251855327416552E-4 26 1.3216936182023644E-4 0.0 0.0 0.012952597458383171 9.251855327416552E-4 27 1.3216936182023644E-4 0.0 0.0 0.015728154056608136 9.251855327416552E-4 28 1.3216936182023644E-4 0.0 0.0 0.023922654489462798 9.251855327416552E-4 29 1.3216936182023644E-4 0.0 0.0 0.037536098756947155 9.251855327416552E-4 30 1.3216936182023644E-4 0.0 0.0 0.06106224516094924 9.251855327416552E-4 31 1.3216936182023644E-4 0.0 0.0 0.11062575584353791 9.251855327416552E-4 32 1.3216936182023644E-4 0.0 0.0 0.1642865167425539 9.251855327416552E-4 33 1.3216936182023644E-4 0.0 0.0 0.21120664018873786 9.251855327416552E-4 34 1.3216936182023644E-4 0.0 0.0 0.2729297321587883 9.251855327416552E-4 35 1.3216936182023644E-4 0.0 0.0 0.3349171628524792 9.251855327416552E-4 36 1.3216936182023644E-4 0.0 0.0 0.42003423186471145 9.251855327416552E-4 37 1.3216936182023644E-4 0.0 0.0 0.5465203111266778 9.251855327416552E-4 38 1.3216936182023644E-4 0.0 0.0 0.705387884034602 0.0010573548945618915 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGACCGT 60 9.747253E-6 25.666475 6 CCGGTAG 55 1.5929315E-4 23.99982 4 CGTCGTA 195 0.0 21.435736 10 GTATAGA 145 1.2732926E-11 21.24543 1 CCGTCGT 190 0.0 20.841948 9 TTAACGG 75 5.469483E-5 20.533178 35 ACCGTCG 210 0.0 19.904612 8 ATACCGT 200 0.0 19.79985 6 CTAGCGG 245 0.0 19.754953 29 TACCGTC 195 0.0 19.179342 7 AATACGA 245 0.0 18.857002 39 GTAAACG 175 9.094947E-12 18.857 27 TAGAACA 225 0.0 18.57764 4 TCTAGCG 250 0.0 18.47986 28 CGCAATA 250 0.0 18.47986 36 GTATAGT 60 0.0074014547 18.336832 1 CGGGATT 60 0.0074099246 18.333197 44 CGGTCCA 265 0.0 18.264015 10 CCCGTTT 110 2.7938222E-6 17.999865 22 GCAATAC 270 0.0 17.92579 37 >>END_MODULE