##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062491_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1643708 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27030835160503 32.0 32.0 32.0 32.0 32.0 2 31.385834345273004 32.0 32.0 32.0 32.0 32.0 3 31.469175181966627 32.0 32.0 32.0 32.0 32.0 4 31.572444740793376 32.0 32.0 32.0 32.0 32.0 5 31.50761753304115 32.0 32.0 32.0 32.0 32.0 6 35.09052155248986 36.0 36.0 36.0 36.0 36.0 7 35.1010380189182 36.0 36.0 36.0 36.0 36.0 8 35.04042993037693 36.0 36.0 36.0 36.0 36.0 9 35.187406765678574 36.0 36.0 36.0 36.0 36.0 10 35.040503544425164 36.0 36.0 36.0 36.0 36.0 11 35.184209117434484 36.0 36.0 36.0 36.0 36.0 12 35.083292166248505 36.0 36.0 36.0 36.0 36.0 13 35.142162111518594 36.0 36.0 36.0 36.0 36.0 14 35.10108729774388 36.0 36.0 36.0 36.0 36.0 15 35.05734534357684 36.0 36.0 36.0 36.0 36.0 16 35.07610354150494 36.0 36.0 36.0 36.0 36.0 17 35.0404743421581 36.0 36.0 36.0 36.0 36.0 18 35.05752420746264 36.0 36.0 36.0 36.0 36.0 19 35.04079800061812 36.0 36.0 36.0 36.0 36.0 20 35.03823428492165 36.0 36.0 36.0 36.0 36.0 21 35.03480119339932 36.0 36.0 36.0 36.0 36.0 22 35.01631189968048 36.0 36.0 36.0 36.0 36.0 23 34.97413409194334 36.0 36.0 36.0 32.0 36.0 24 34.950509457884245 36.0 36.0 36.0 32.0 36.0 25 34.92843862778547 36.0 36.0 36.0 32.0 36.0 26 34.88402319633414 36.0 36.0 36.0 32.0 36.0 27 34.870250068747005 36.0 36.0 36.0 32.0 36.0 28 34.85732928232995 36.0 36.0 36.0 32.0 36.0 29 34.833161364427255 36.0 36.0 36.0 32.0 36.0 30 34.81926838586902 36.0 36.0 36.0 32.0 36.0 31 34.82564117227634 36.0 36.0 36.0 32.0 36.0 32 34.78369759105632 36.0 36.0 36.0 32.0 36.0 33 34.76584831369075 36.0 36.0 36.0 32.0 36.0 34 34.759850289710826 36.0 36.0 36.0 32.0 36.0 35 34.737777634470355 36.0 36.0 36.0 32.0 36.0 36 34.70440248511293 36.0 36.0 36.0 32.0 36.0 37 34.70132590460106 36.0 36.0 36.0 32.0 36.0 38 34.67440080598257 36.0 36.0 36.0 32.0 36.0 39 34.666825251200336 36.0 36.0 36.0 32.0 36.0 40 34.66793797925179 36.0 36.0 36.0 32.0 36.0 41 34.63347017840152 36.0 36.0 36.0 32.0 36.0 42 34.60508679157125 36.0 36.0 36.0 32.0 36.0 43 34.603242181701376 36.0 36.0 36.0 32.0 36.0 44 34.56508820301416 36.0 36.0 36.0 32.0 36.0 45 34.53406809481976 36.0 36.0 36.0 32.0 36.0 46 34.53331674482329 36.0 36.0 36.0 32.0 36.0 47 34.51667510287715 36.0 36.0 36.0 32.0 36.0 48 34.47847245374483 36.0 36.0 36.0 32.0 36.0 49 34.45499261425995 36.0 36.0 36.0 32.0 36.0 50 33.92682520252989 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 4.0 21 28.0 22 126.0 23 397.0 24 988.0 25 2335.0 26 5012.0 27 9225.0 28 15753.0 29 24882.0 30 36928.0 31 53896.0 32 79314.0 33 133073.0 34 293514.0 35 988230.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.626316055281166 18.272016297393353 11.366616508047384 26.73505113927809 2 16.74733078331296 20.581304866555897 35.8157803956689 26.855583954462244 3 18.55319185180273 23.72749058374972 28.843323694516215 28.87599386993133 4 12.655008045847643 15.727396339367466 35.915021247729975 35.702574367054915 5 14.606852311967819 36.36862508426071 33.39181898488053 15.632703618890947 6 34.3815572296908 35.469833017075494 16.47909200030906 13.669517752924651 7 30.232699623473042 30.52429660517355 20.696450158087785 18.546553613265623 8 28.263674730350363 32.45742702318601 19.528297926576936 19.750600319886697 9 27.54029304475004 13.874118760753126 18.65167049135248 39.93391770314435 10 16.16083878645112 26.28380466603557 31.420118415192967 26.13523813232034 11 37.75123075388086 20.946056112156175 22.154969130770187 19.14774400319278 12 24.59275005049559 23.737123625364116 28.43735018628613 23.23277613785417 13 29.41191501166874 19.222270622275975 25.287520654520147 26.07829371153514 14 23.45045470363349 19.758253899111033 24.730548248229002 32.06074314902647 15 25.35541592545635 27.16960676713869 21.94313101840473 25.53184628900024 16 26.06040732295517 25.687895903651984 23.454774205637495 24.796922567755345 17 24.22449729514001 25.663621519150603 24.97511723493467 25.13676395077471 18 25.266592363120456 24.56914488461454 26.02621633526149 24.138046417003505 19 25.777510360721006 24.945732453696156 25.06436666366532 24.212390521917516 20 25.801845583278784 24.30535107208823 24.746122790665982 25.146680553967006 21 26.91773721366569 24.13397026722508 24.22540986598593 24.722882653123303 22 25.964404869964735 24.418327342812713 24.702988608682322 24.914279178540227 23 24.721240025600654 24.038758708967773 25.31441107544649 25.92559018998508 24 24.883860150343004 25.024700250896142 24.87394354715071 25.217496051610137 25 24.889335575418507 24.457142022792368 25.156536319102905 25.496986082686217 26 24.537995799740585 25.277725727440643 25.566341466975885 24.617937005842887 27 25.468878900631985 24.692767815208054 24.701163466990486 25.137189817169475 28 24.534528030526104 24.645131617051202 25.528743548124122 25.29159680429857 29 24.687535742358133 24.784146575912512 25.288494063422455 25.2398236183069 30 24.50051955700161 24.998053182195378 25.595361219876033 24.906066040926977 31 25.188719650935564 24.727019640958126 24.51396476746478 25.570295940641525 32 24.844680442024984 24.724525280645953 24.674881426628087 25.755912850700973 33 24.499241957817325 24.409992529086676 25.247671727581782 25.843093785514213 34 25.231853832919228 24.498998605591748 25.516819289070806 24.752328272418215 35 25.70736408169821 24.46468594178528 25.21421079656484 24.613739179951672 36 24.5488249737788 24.84206440560002 24.9693376195772 25.63977300104398 37 25.529169414518883 24.678045005560598 24.709072414321763 25.083713165598752 38 24.60826375487617 24.379330148663875 25.473076726523203 25.539329369936752 39 25.202347375567925 24.278764841443856 24.896453628016655 25.622434154971565 40 25.46455939862798 24.396729832792687 25.600897483007927 24.537813285571403 41 24.412182699116876 24.625298410666616 26.030596675321892 24.931922214894616 42 25.43998082384463 24.941899656143303 25.313133476262205 24.304986043749864 43 24.500641233114397 23.98710719908889 25.749464016723167 25.762787551073547 44 24.20758431546236 24.44564363013382 25.461274143582678 25.885497910821144 45 24.24037602785896 24.742350831169528 25.726649745575248 25.29062339539626 46 24.16928574818124 24.277395105937437 25.79183868648043 25.761480459400893 47 24.28606540821119 24.150457380507973 26.225278455784117 25.338198755496716 48 24.791082114341474 24.822413713384616 25.382793050833847 25.00371112144006 49 23.849795705806628 24.92376991533776 25.74721300863657 25.47922137021904 50 23.654459097637233 25.218180612481422 25.543968602676753 25.583391687204593 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 13.5 2 19.0 3 60.5 4 102.0 5 131.0 6 160.0 7 183.0 8 206.0 9 268.5 10 331.0 11 475.5 12 620.0 13 1072.0 14 1524.0 15 2143.0 16 2762.0 17 3407.0 18 4052.0 19 4416.5 20 4781.0 21 5848.0 22 6915.0 23 7546.5 24 8178.0 25 9983.0 26 11788.0 27 15007.0 28 18226.0 29 20698.0 30 23170.0 31 25000.5 32 26831.0 33 31094.5 34 35358.0 35 40900.5 36 46443.0 37 55179.5 38 63916.0 39 68282.5 40 72649.0 41 78970.0 42 85291.0 43 86203.0 44 87115.0 45 94304.5 46 101494.0 47 108235.5 48 114977.0 49 118865.0 50 122753.0 51 118581.0 52 114409.0 53 112482.0 54 110555.0 55 112447.0 56 114339.0 57 112168.5 58 109998.0 59 100867.0 60 91736.0 61 80979.0 62 70222.0 63 62199.5 64 54177.0 65 46660.0 66 39143.0 67 34692.0 68 30241.0 69 27535.0 70 24829.0 71 19546.0 72 14263.0 73 12757.0 74 11251.0 75 8549.5 76 5848.0 77 5184.5 78 4521.0 79 4002.5 80 3484.0 81 2773.0 82 2062.0 83 1779.5 84 1497.0 85 1194.0 86 891.0 87 645.5 88 400.0 89 261.0 90 122.0 91 79.0 92 36.0 93 21.5 94 7.0 95 4.5 96 2.0 97 2.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015513704380583413 2 0.0037111214400611303 3 4.258663947611133E-4 4 1.8251416918333427E-4 5 0.0 6 4.258663947611133E-4 7 6.0838056394444754E-5 8 6.0838056394444754E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.2167611278888951E-4 47 0.0 48 0.0 49 0.0 50 6.0838056394444754E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1643708.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.762392269127474 #Duplication Level Percentage of deduplicated Percentage of total 1 82.15275903968556 46.6318713460174 2 11.160518036564877 12.669954054363355 3 2.870742468664419 4.888506303299194 4 1.1541482644008023 2.620488660826039 5 0.6316643657947725 1.7927390256836249 6 0.41148073404873675 1.4013978502357745 7 0.2724569178097114 1.0825714511606581 8 0.2008884291648451 0.9122326254867011 9 0.15445344806932865 0.7890432485967488 >10 0.8205993997388268 8.568251517373962 >50 0.07568156371918197 3.033571444848602 >100 0.08276820187533968 10.075431635696024 >500 0.009256047453399209 3.568534406417301 >1k 0.002583083010250942 1.9654064299947098 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1861 0.11321962295006169 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1836 0.11169867154020058 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1749 0.10640576063388388 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.0838056394444754E-5 2 0.0 0.0 0.0 0.0 6.0838056394444754E-5 3 0.0 0.0 0.0 0.0 6.0838056394444754E-5 4 0.0 0.0 0.0 0.0 6.0838056394444754E-5 5 0.0 0.0 0.0 0.0 6.0838056394444754E-5 6 0.0 0.0 0.0 0.0 1.2167611278888951E-4 7 0.0 0.0 0.0 0.0 1.2167611278888951E-4 8 0.0 0.0 0.0 0.0 1.2167611278888951E-4 9 0.0 0.0 0.0 6.0838056394444754E-5 1.2167611278888951E-4 10 0.0 0.0 0.0 6.0838056394444754E-5 1.2167611278888951E-4 11 0.0 0.0 0.0 6.0838056394444754E-5 1.2167611278888951E-4 12 0.0 0.0 0.0 1.2167611278888951E-4 3.6502833836666855E-4 13 0.0 0.0 0.0 1.2167611278888951E-4 3.6502833836666855E-4 14 0.0 0.0 0.0 1.2167611278888951E-4 3.6502833836666855E-4 15 0.0 0.0 0.0 1.2167611278888951E-4 4.258663947611133E-4 16 0.0 0.0 0.0 1.2167611278888951E-4 4.258663947611133E-4 17 0.0 0.0 0.0 1.2167611278888951E-4 4.258663947611133E-4 18 0.0 0.0 0.0 2.4335222557777901E-4 4.8670445115555803E-4 19 0.0 0.0 0.0 2.4335222557777901E-4 4.8670445115555803E-4 20 0.0 0.0 0.0 6.692186203388923E-4 4.8670445115555803E-4 21 0.0 0.0 0.0 7.300566767333371E-4 5.475425075500028E-4 22 0.0 0.0 0.0 0.0010342469587055609 5.475425075500028E-4 23 0.0 0.0 0.0 0.0013384372406777846 6.083805639444475E-4 24 0.0 0.0 0.0 0.002311846142988901 6.083805639444475E-4 25 0.0 0.0 0.0 0.002981064763327793 6.692186203388923E-4 26 0.0 0.0 0.0 0.0038327975528500194 6.692186203388923E-4 27 0.0 0.0 0.0 0.006205481752233365 7.300566767333371E-4 28 6.0838056394444754E-5 0.0 0.0 0.017034655790444532 7.300566767333371E-4 29 6.0838056394444754E-5 0.0 0.0 0.0360161293855113 7.300566767333371E-4 30 6.0838056394444754E-5 0.0 0.0 0.07537835187271705 7.300566767333371E-4 31 6.0838056394444754E-5 0.0 0.0 0.16450610449057862 7.300566767333371E-4 32 6.0838056394444754E-5 0.0 0.0 0.27060767484249026 7.300566767333371E-4 33 6.0838056394444754E-5 0.0 0.0 0.38303640305942416 7.300566767333371E-4 34 6.0838056394444754E-5 0.0 0.0 0.5131690056871415 7.908947331277818E-4 35 6.0838056394444754E-5 0.0 0.0 0.6569293329472145 7.908947331277818E-4 36 6.0838056394444754E-5 0.0 0.0 0.857269052654121 7.908947331277818E-4 37 6.0838056394444754E-5 0.0 0.0 1.1328046100645612 7.908947331277818E-4 38 1.2167611278888951E-4 0.0 0.0 1.5002056326306132 7.908947331277818E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAACGG 230 0.0 20.086914 35 GTATCAA 2545 0.0 20.056799 1 TAACGGC 245 0.0 18.857105 36 GTAAGAC 110 2.797724E-6 17.999962 3 TATACCG 90 2.2160164E-4 17.111076 5 ATACCGG 130 7.320905E-7 16.923042 6 CGTCTTA 315 0.0 16.76187 15 GTATAAA 225 1.8189894E-12 16.623705 1 TAGGACG 385 0.0 16.571394 4 AACGCAG 3125 0.0 16.191965 6 TAATACT 410 0.0 16.097527 4 CAACGGA 220 1.8189894E-11 15.999966 14 TACCGTC 595 0.0 15.899127 7 ATACCGT 605 0.0 15.636332 6 CGTATTG 655 0.0 15.450351 27 GCATTCG 705 0.0 15.290748 22 ACCGTCG 605 0.0 15.272696 8 GGCGTTA 520 0.0 15.230738 42 CGTCGTA 585 0.0 15.042705 10 TGTAGGA 630 0.0 15.0158415 2 >>END_MODULE