##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062490_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 922894 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23825163019805 32.0 32.0 32.0 32.0 32.0 2 31.38409828214291 32.0 32.0 32.0 32.0 32.0 3 31.48945382676667 32.0 32.0 32.0 32.0 32.0 4 31.596408688321734 32.0 32.0 32.0 32.0 32.0 5 31.540453183139125 32.0 32.0 32.0 32.0 32.0 6 35.12000294725071 36.0 36.0 36.0 36.0 36.0 7 35.12871359007644 36.0 36.0 36.0 36.0 36.0 8 35.06985634319868 36.0 36.0 36.0 36.0 36.0 9 35.2130970620678 36.0 36.0 36.0 36.0 36.0 10 35.087539847479775 36.0 36.0 36.0 36.0 36.0 11 35.21219988427707 36.0 36.0 36.0 36.0 36.0 12 35.122388920070996 36.0 36.0 36.0 36.0 36.0 13 35.171271023541166 36.0 36.0 36.0 36.0 36.0 14 35.14084391056828 36.0 36.0 36.0 36.0 36.0 15 35.08899288542346 36.0 36.0 36.0 36.0 36.0 16 35.10680424837522 36.0 36.0 36.0 36.0 36.0 17 35.08825390564897 36.0 36.0 36.0 36.0 36.0 18 35.09086959065721 36.0 36.0 36.0 36.0 36.0 19 35.073004050302636 36.0 36.0 36.0 36.0 36.0 20 35.06583746345734 36.0 36.0 36.0 36.0 36.0 21 35.05772277206266 36.0 36.0 36.0 36.0 36.0 22 35.03840636086051 36.0 36.0 36.0 36.0 36.0 23 35.006858859197266 36.0 36.0 36.0 36.0 36.0 24 34.976864081898896 36.0 36.0 36.0 36.0 36.0 25 34.954442221966985 36.0 36.0 36.0 32.0 36.0 26 34.90915858159225 36.0 36.0 36.0 32.0 36.0 27 34.888310033438295 36.0 36.0 36.0 32.0 36.0 28 34.8790066898257 36.0 36.0 36.0 32.0 36.0 29 34.85482298075402 36.0 36.0 36.0 32.0 36.0 30 34.82703755794273 36.0 36.0 36.0 32.0 36.0 31 34.83117021022999 36.0 36.0 36.0 32.0 36.0 32 34.78895301085498 36.0 36.0 36.0 32.0 36.0 33 34.767669959930394 36.0 36.0 36.0 32.0 36.0 34 34.75681064130875 36.0 36.0 36.0 32.0 36.0 35 34.70737376123368 36.0 36.0 36.0 32.0 36.0 36 34.68090809995514 36.0 36.0 36.0 32.0 36.0 37 34.656011416262324 36.0 36.0 36.0 32.0 36.0 38 34.62649014946462 36.0 36.0 36.0 32.0 36.0 39 34.60222734138482 36.0 36.0 36.0 32.0 36.0 40 34.5855840432379 36.0 36.0 36.0 32.0 36.0 41 34.560753455976524 36.0 36.0 36.0 32.0 36.0 42 34.49881134778209 36.0 36.0 36.0 32.0 36.0 43 34.50474810758332 36.0 36.0 36.0 32.0 36.0 44 34.46698645781639 36.0 36.0 36.0 32.0 36.0 45 34.40225312982856 36.0 36.0 36.0 32.0 36.0 46 34.40857671628594 36.0 36.0 36.0 32.0 36.0 47 34.361817283458336 36.0 36.0 36.0 32.0 36.0 48 34.328777736121374 36.0 36.0 36.0 32.0 36.0 49 34.3256777051319 36.0 36.0 36.0 32.0 36.0 50 33.801984843329784 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 13.0 21 19.0 22 81.0 23 227.0 24 601.0 25 1445.0 26 3081.0 27 5959.0 28 9746.0 29 15037.0 30 21383.0 31 30498.0 32 44606.0 33 71981.0 34 157618.0 35 560596.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.87760078287642 18.472047171988976 11.463547587594054 26.186804457540553 2 15.834443121247354 20.730043593263904 37.29808451870241 26.13742876678633 3 18.405118703204064 24.673471377954034 29.069553251200038 27.851856667641865 4 11.874845594067345 16.16061250937271 37.14963397667332 34.814907919886615 5 13.598744817931422 37.41513109847935 34.43851623263343 14.5476078509558 6 33.322028278529096 36.52890753079183 16.99799868023418 13.151065510444896 7 29.343564916447612 31.35376327075482 21.05583089715612 18.24684091564145 8 27.420050406655587 33.72705857877503 19.797831603629454 19.055059410939933 9 27.041350360929854 14.506974798839304 19.07943924220983 39.37223559802101 10 15.256464989478749 27.117740498908866 32.91526437489029 24.710530136722095 11 36.56357068092327 21.741933526493835 22.857337895793016 18.83715789678988 12 23.907837736511453 24.721257262480847 29.3797554215327 21.991149579475 13 28.759424159220888 20.147492561442593 25.951842790179587 25.141240489156935 14 22.63076799719144 20.616668869881046 25.918902929263815 30.833660203663694 15 24.78280279208663 27.729728441186097 23.225094106148703 24.26237466057857 16 25.108517337852447 26.538042288713548 24.49187013893253 23.86157023450147 17 23.089108825065498 26.429904192680848 26.175595463834416 24.305391518419235 18 23.7520235259954 25.47313125884446 27.58269096992721 23.192154245232928 19 24.595565687933828 26.25642814884483 26.123585157125305 23.02442100609604 20 24.35881043760172 25.484075094214504 26.437922448298508 23.719192019885273 21 25.489817898913635 25.133222233539282 25.2544712610549 24.122488606492187 22 24.295314521494344 25.86006626979913 25.721155408963543 24.123463799742982 23 23.647136074132025 25.302689149566472 26.239199734747437 24.810975041554066 24 23.622214468833906 26.48332311186333 25.969721333110847 23.924741086191915 25 24.08998216479899 25.496319187252276 26.288826235732383 24.124872412216355 26 23.227911331095445 26.01382173900795 26.92562742850208 23.832639501394524 27 24.26584201435918 26.223379933123415 25.817374476375406 23.693403576142007 28 23.471492934183125 25.558839910108855 26.631335776373017 24.338331379335003 29 23.55861019792089 25.97903984639623 26.55657096047867 23.905778995204216 30 24.05541698179856 25.708477896703197 26.774472474628723 23.46163264686952 31 23.735553595537514 25.629162178971796 26.12618567246076 24.509098553029926 32 23.19291272887244 26.06399001402111 26.20604316422038 24.537054092886073 33 23.421324659169958 25.606516024592207 26.468478503490108 24.503680812747728 34 23.65818826430771 25.7732740704783 27.133885364949823 23.43465230026417 35 24.609110038639322 25.776199650230687 26.162917951574073 23.45177235955592 36 23.494355798174006 25.8417543076453 26.371934371661315 24.29195552251938 37 24.540738156277968 25.771757103199285 25.72494782716108 23.962556913361666 38 23.56771200159498 25.954768369931973 26.294135621208937 24.183384007264106 39 23.70608108840235 25.970804881167286 25.678571970345455 24.644542060084905 40 24.2979150368298 25.886829906793196 26.453633895116884 23.361621161260125 41 23.450038682665614 25.839803921143705 26.863431770062434 23.846725626128247 42 24.20635522606063 26.345929218306765 26.0065619670298 23.44115358860281 43 23.44180371743667 25.739684080728665 26.242125314499827 24.576386887334838 44 23.443429039521334 25.839803921143705 26.480072467694015 24.236694571640946 45 23.486987671390214 26.10993245161416 26.53999267521514 23.863087201780488 46 23.648219622188464 25.707611058258045 26.137346217442094 24.5068231021114 47 23.900036190505087 25.64411514215067 26.430771031126 24.025077636218246 48 23.99831399922418 26.599696173124975 25.59037115855125 23.811618669099595 49 23.09615188743236 25.942849341311135 26.590811079062167 24.370187692194335 50 22.832007610849793 26.756406213938128 25.87017129829785 24.541414876914224 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 51.0 1 42.0 2 33.0 3 132.0 4 231.0 5 224.5 6 218.0 7 199.5 8 181.0 9 261.0 10 341.0 11 480.0 12 619.0 13 1114.0 14 1609.0 15 2080.5 16 2552.0 17 3038.0 18 3524.0 19 3938.5 20 4353.0 21 5323.0 22 6293.0 23 6431.0 24 6569.0 25 8178.5 26 9788.0 27 12644.5 28 15501.0 29 17096.5 30 18692.0 31 19118.5 32 19545.0 33 22286.0 34 25027.0 35 28750.0 36 32473.0 37 38143.0 38 43813.0 39 45537.0 40 47261.0 41 50615.5 42 53970.0 43 53146.0 44 52322.0 45 56391.0 46 60460.0 47 63363.0 48 66266.0 49 65102.5 50 63939.0 51 61677.5 52 59416.0 53 58064.5 54 56713.0 55 56885.0 56 57057.0 57 55513.5 58 53970.0 59 48673.5 60 43377.0 61 38627.5 62 33878.0 63 29149.5 64 24421.0 65 21039.0 66 17657.0 67 15340.0 68 13023.0 69 11768.5 70 10514.0 71 8175.0 72 5836.0 73 5169.0 74 4502.0 75 3395.0 76 2288.0 77 2019.5 78 1751.0 79 1466.5 80 1182.0 81 955.5 82 729.0 83 601.0 84 473.0 85 371.5 86 270.0 87 204.5 88 139.0 89 92.5 90 46.0 91 29.5 92 13.0 93 9.0 94 5.0 95 4.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015494737207089873 2 0.00487596625397933 3 4.3341922257594047E-4 4 2.1670961128797024E-4 5 0.0 6 3.2506441693195534E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 1.0835480564398512E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 922894.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.60068857787382 #Duplication Level Percentage of deduplicated Percentage of total 1 81.24891229370809 47.61242206614572 2 12.10045648562727 14.181901643287143 3 3.136895304122542 5.514726744548396 4 1.1751714590431586 2.7546342678797497 5 0.5923628762063644 1.7356436216831388 6 0.35353181596559186 1.2430324709861909 7 0.22100521192856634 0.9065740318819046 8 0.1568400634003417 0.7352748569485928 9 0.1203525792330287 0.6347469613660738 >10 0.6950227723418084 7.81069702163113 >50 0.10130796849214137 4.188319917347718 >100 0.0916356000185634 10.271449102875522 >500 0.006133823060314254 2.1867403073822045 >1k 3.717468521402578E-4 0.2238369860365825 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 1040 0.11268899786974453 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 1015 0.10998012772864489 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 2.1670961128797024E-4 0.0 12 0.0 0.0 0.0 2.1670961128797024E-4 2.1670961128797024E-4 13 0.0 0.0 0.0 2.1670961128797024E-4 2.1670961128797024E-4 14 0.0 0.0 0.0 2.1670961128797024E-4 2.1670961128797024E-4 15 0.0 0.0 0.0 3.2506441693195534E-4 4.3341922257594047E-4 16 1.0835480564398512E-4 0.0 0.0 3.2506441693195534E-4 4.3341922257594047E-4 17 1.0835480564398512E-4 0.0 0.0 4.3341922257594047E-4 4.3341922257594047E-4 18 1.0835480564398512E-4 0.0 0.0 4.3341922257594047E-4 5.417740282199256E-4 19 1.0835480564398512E-4 0.0 0.0 4.3341922257594047E-4 5.417740282199256E-4 20 1.0835480564398512E-4 0.0 0.0 7.584836395078959E-4 0.0010835480564398512 21 1.0835480564398512E-4 0.0 0.0 0.0013002576677278214 0.0010835480564398512 22 1.0835480564398512E-4 0.0 0.0 0.002492160529811658 0.0013002576677278214 23 1.0835480564398512E-4 0.0 0.0 0.00465925664269136 0.0013002576677278214 24 1.0835480564398512E-4 0.0 0.0 0.0072597719781470026 0.0013002576677278214 25 1.0835480564398512E-4 0.0 0.0 0.009860287313602646 0.0013002576677278214 26 1.0835480564398512E-4 0.0 0.0 0.012352447843414303 0.0013002576677278214 27 1.0835480564398512E-4 0.0 0.0 0.014844608373225961 0.0014086124733718064 28 1.0835480564398512E-4 0.0 0.0 0.021670961128797024 0.0014086124733718064 29 1.0835480564398512E-4 0.0 0.0 0.03532366663993915 0.0014086124733718064 30 1.0835480564398512E-4 0.0 0.0 0.058836659464683916 0.0014086124733718064 31 1.0835480564398512E-4 0.0 0.0 0.1056459355028855 0.0015169672790157917 32 1.0835480564398512E-4 0.0 0.0 0.1645909497732134 0.0015169672790157917 33 1.0835480564398512E-4 0.0 0.0 0.22461951209998116 0.0015169672790157917 34 1.0835480564398512E-4 0.0 0.0 0.2887655570412203 0.0017336768903037619 35 1.0835480564398512E-4 0.0 0.0 0.3677562103556855 0.0017336768903037619 36 1.0835480564398512E-4 0.0 0.0 0.47177682377391117 0.0017336768903037619 37 1.0835480564398512E-4 0.0 0.0 0.6292163563746216 0.001842031695947747 38 1.0835480564398512E-4 0.0 0.0 0.8281557795369783 0.001950386501591732 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGAT 45 0.0013979636 24.444443 11 GCTAGAC 95 6.862683E-7 20.842106 3 CGCGGGA 205 0.0 20.390245 44 AAACGCT 225 0.0 19.555555 29 GTCGATG 105 1.79175E-6 18.857143 12 TATACTG 95 1.596443E-5 18.526316 5 GTAAACG 230 0.0 18.173914 27 TAACGGC 275 0.0 17.6 36 GGTCGGA 240 0.0 17.416668 38 GTATATC 215 0.0 17.395348 3 ACGCTTC 280 0.0 17.285715 31 CGTTTAT 255 0.0 17.2549 31 AGACCGT 115 4.2706724E-6 17.217392 6 TAATACC 90 2.2146571E-4 17.11111 4 TAAACGC 245 0.0 17.061224 28 GATTTCG 130 7.3121737E-7 16.923077 41 CGCAATA 195 4.9112714E-11 16.923077 36 ATACCGT 170 2.4647306E-9 16.82353 6 ATAATAC 105 3.7727834E-5 16.761906 3 GATTAAT 250 0.0 16.72 38 >>END_MODULE