##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062489_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2233251 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.249337848723677 32.0 32.0 32.0 32.0 32.0 2 30.923249558603132 32.0 32.0 32.0 32.0 32.0 3 30.904092732970902 32.0 32.0 32.0 32.0 32.0 4 30.978826383599515 32.0 32.0 32.0 32.0 32.0 5 30.782942445788674 32.0 32.0 32.0 32.0 32.0 6 34.44470684217762 36.0 36.0 36.0 32.0 36.0 7 34.34002626663998 36.0 36.0 36.0 32.0 36.0 8 34.345413032390894 36.0 36.0 36.0 32.0 36.0 9 34.490402556631565 36.0 36.0 36.0 32.0 36.0 10 34.17787700531647 36.0 36.0 36.0 32.0 36.0 11 34.46926431466951 36.0 36.0 36.0 32.0 36.0 12 34.249019031000095 36.0 36.0 36.0 32.0 36.0 13 34.3810337485576 36.0 36.0 36.0 32.0 36.0 14 34.287673888873215 36.0 36.0 36.0 32.0 36.0 15 34.22423766965738 36.0 36.0 36.0 32.0 36.0 16 34.22371242641333 36.0 36.0 36.0 32.0 36.0 17 34.14357006892642 36.0 36.0 36.0 32.0 36.0 18 34.15958394287073 36.0 36.0 36.0 32.0 36.0 19 34.14211031361902 36.0 36.0 36.0 32.0 36.0 20 34.147903661523046 36.0 36.0 36.0 32.0 36.0 21 34.117228202293425 36.0 36.0 36.0 32.0 36.0 22 34.07771450678853 36.0 36.0 36.0 32.0 36.0 23 34.04441551800492 36.0 36.0 36.0 32.0 36.0 24 34.020993161986716 36.0 36.0 36.0 32.0 36.0 25 33.57470566452226 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 13.0 4 87.0 5 239.0 6 365.0 7 78.0 8 346.0 9 401.0 10 258.0 11 81.0 12 168.0 13 136.0 14 320.0 15 382.0 16 605.0 17 882.0 18 1151.0 19 1554.0 20 2260.0 21 3450.0 22 5354.0 23 7837.0 24 11466.0 25 16430.0 26 23295.0 27 30811.0 28 42651.0 29 58327.0 30 76090.0 31 105782.0 32 153349.0 33 225580.0 34 510850.0 35 952653.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.211415131896835 17.514490134885992 11.287057151340015 25.987037581877154 2 17.346161079715923 19.71878666296492 36.03717568668894 26.897876570630224 3 19.118207469058046 23.09750471646785 28.358543803705377 29.425744010768728 4 12.997556080933714 14.901994680434182 35.02435633835807 37.07609290027404 5 15.221951517773993 35.76438768759124 33.039082226812106 15.974578567822661 6 35.122199250520225 34.522705026173554 16.371362077577654 13.983733645728568 7 30.81513152529553 30.145474065504107 20.44523147430388 18.59416293489648 8 28.66568606096786 31.919253305510665 19.48205375045826 19.933006883063218 9 27.18396427900706 14.325957646312148 18.822412036561843 39.667666038118945 10 16.470598256342804 26.01924415818352 30.6239714085768 26.886186176896874 11 37.89544707683548 20.98074685783071 21.722000676964598 19.401805388369212 12 24.85806498475953 23.575784913413138 27.88867237067122 23.677477731156117 13 29.2436817310434 18.791077938916377 25.327637192470263 26.63760313756996 14 23.731397953881405 19.70112088634353 24.3354866940421 32.23199446573296 15 25.46922574837629 26.80777658632104 22.028012781660973 25.6949848836417 16 26.43537130745699 25.463439475826554 23.25741736270751 24.843771854008946 17 24.41205691310601 25.639008145302732 24.9016807084369 25.04725423315436 18 25.55878082878462 24.20770819377824 25.933483447533114 24.30002752990402 19 25.717165521533346 25.022463265163374 24.995964682904784 24.264406530398492 20 25.751876496871084 23.969529510608897 24.73169524489282 25.5468987476272 21 27.107999408148714 24.025754498293946 24.021763985849372 24.844482107707965 22 25.96789889812228 24.101344048649448 24.597884143634268 25.332872909594006 23 24.39808995883161 23.82318532412541 25.271096614560097 26.507628102482883 24 24.767967887894603 25.04444694548036 24.860740377376427 25.326844789248614 25 25.07465403571198 24.25978169635491 24.805002761975135 25.860561505957975 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 222.0 1 222.0 2 623.0 3 1024.0 4 1024.0 5 1024.0 6 2621.5 7 4219.0 8 4219.0 9 4219.0 10 4567.5 11 4916.0 12 4916.0 13 4916.0 14 5536.5 15 6157.0 16 6157.0 17 6157.0 18 9837.0 19 13517.0 20 13517.0 21 13517.0 22 21926.5 23 30336.0 24 30336.0 25 30336.0 26 45466.0 27 60596.0 28 60596.0 29 60596.0 30 73860.0 31 87124.0 32 87124.0 33 87124.0 34 109853.0 35 132582.0 36 132582.0 37 132582.0 38 150708.5 39 168835.0 40 168835.0 41 168835.0 42 195010.0 43 221185.0 44 221185.0 45 221185.0 46 256776.5 47 292368.0 48 292368.0 49 292368.0 50 295248.5 51 298129.0 52 298129.0 53 298129.0 54 277682.0 55 257235.0 56 257235.0 57 257235.0 58 239974.0 59 222713.0 60 222713.0 61 222713.0 62 198513.0 63 174313.0 64 174313.0 65 174313.0 66 145947.5 67 117582.0 68 117582.0 69 117582.0 70 89543.0 71 61504.0 72 61504.0 73 61504.0 74 48770.0 75 36036.0 76 36036.0 77 36036.0 78 30433.5 79 24831.0 80 24831.0 81 24831.0 82 17397.5 83 9964.0 84 9964.0 85 9964.0 86 7445.5 87 4927.0 88 4927.0 89 4927.0 90 3312.5 91 1698.0 92 1698.0 93 1698.0 94 967.5 95 237.0 96 237.0 97 237.0 98 619.0 99 1001.0 100 1001.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008059998629800233 2 0.003179221681754537 3 0.005283776879535709 4 0.01620955279993158 5 0.036001327213107705 6 0.0463897698915169 7 0.06774876626048751 8 0.08852565161730588 9 0.09770509450124504 10 0.11875064647905677 11 0.12116864606799684 12 0.13455719934749832 13 0.12246720140279797 14 0.12466131214091028 15 0.11440720277299775 16 0.11369075845034884 17 0.12372097896743356 18 0.13204964421822715 19 0.1317809775972338 20 0.1238105345077647 21 0.13258697746021383 22 0.15318475173636997 23 0.14069175386017962 24 0.1371990877872662 25 0.13267653300054497 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2233251.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.55306655535072 #Duplication Level Percentage of deduplicated Percentage of total 1 78.75579117865338 37.450793795378075 2 12.635684135916737 12.017310573752756 3 3.5837386252588193 5.112532840917411 4 1.6015297060911173 3.046305948164887 5 0.8503411694085181 2.0218165111819006 6 0.5182641858465258 1.47870307936887 7 0.35409054968676257 1.178666403311274 8 0.2500601316349165 0.9512900865979959 9 0.2004280424528742 0.8577871238088168 >10 1.0352153997882108 8.896656734229294 >50 0.08727974725222137 2.9148857979190805 >100 0.099386754106921 10.261711990729996 >500 0.018385026458592097 6.046636669514975 >1k 0.009805347444582453 7.764902445124735 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4317 0.19330563380470894 No Hit GTACATGGAAGCAGTGGTATCAACG 3571 0.1599014172612035 No Hit GCGCAAGACGGACCAGAGCGAAAGC 3441 0.15408030713968113 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 3224 0.14436353101375526 No Hit TCCATGTACTCTGCGTTGATACCAC 3124 0.1398857539971996 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 3120 0.13970664291653737 No Hit GAATAGGACCGCGGTTCTATTTTGT 3090 0.13836330981157066 No Hit TATCAACGCAGAGTACTTTTTTTTT 3045 0.1363483101541206 No Hit GAATAACGCCGCCGCATCGCCAGTC 2964 0.1327213107707105 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2841 0.12721364504034702 No Hit GAACTACGACGGTATCTGATCGTCT 2824 0.12645242294753253 No Hit GTATCTGATCGTCTTCGAACCTCCG 2819 0.12622853409670476 No Hit GTCCTATTCCATTATTCCTAGCTGC 2612 0.1169595356724345 No Hit CTATTGGAGCTGGAATTACCGCGGC 2512 0.11248175865587881 No Hit GGGTAGGCACACGCTGAGCCAGTCA 2474 0.11078020338958765 No Hit ATCAGATACCGTCGTAGTTCCGACC 2449 0.10966075913544872 No Hit TCGTAGTTCCGACCATAAACGATGC 2321 0.10392920455425746 No Hit CTCTTAATCATGGCCTCAGTTCCGA 2246 0.1005708717918407 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2246 0.1005708717918407 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 4.4777770165556846E-5 3 0.0 0.0 0.0 0.0 4.4777770165556846E-5 4 0.0 0.0 0.0 0.0 4.4777770165556846E-5 5 0.0 0.0 0.0 4.4777770165556846E-5 4.4777770165556846E-5 6 0.0 0.0 0.0 4.4777770165556846E-5 1.3433331049667055E-4 7 0.0 0.0 0.0 4.4777770165556846E-5 1.3433331049667055E-4 8 0.0 0.0 0.0 4.4777770165556846E-5 1.3433331049667055E-4 9 0.0 0.0 0.0 4.4777770165556846E-5 2.2388885082778425E-4 10 0.0 0.0 0.0 4.4777770165556846E-5 2.2388885082778425E-4 11 0.0 0.0 0.0 4.4777770165556846E-5 2.686666209933411E-4 12 0.0 0.0 0.0 4.4777770165556846E-5 4.0299993149001167E-4 13 0.0 0.0 0.0 4.4777770165556846E-5 4.0299993149001167E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTTAC 100 1.8189894E-12 16.136992 1 CGTTATT 215 0.0 13.689708 2 GCGTTAT 215 0.0 13.245137 1 AAGACGG 625 0.0 13.071429 5 CAAGACG 625 0.0 13.069963 4 CGCATCG 560 0.0 12.8948965 13 GTTCTAA 120 7.512426E-10 12.656465 1 CGCCAGT 580 0.0 12.451363 18 ATCGCCA 595 0.0 12.136917 16 TTAGTGC 55 0.003077395 12.086586 3 GTTATTC 260 0.0 12.053383 3 CGCAAGA 630 0.0 11.905771 2 CGAACGA 225 0.0 11.824623 16 TCGCGTA 290 0.0 11.794175 9 AATCGTA 65 8.015177E-4 11.694158 13 CATCGCC 635 0.0 11.671137 15 CGGTCCA 570 0.0 11.6677265 10 CGACCAT 355 0.0 11.508088 10 CTTATGC 75 2.081486E-4 11.395925 3 GTATAGG 125 1.8550054E-8 11.390819 1 >>END_MODULE