##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062487_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1865217 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29651456104035 32.0 32.0 32.0 32.0 32.0 2 31.37786166435326 32.0 32.0 32.0 32.0 32.0 3 31.47127867695823 32.0 32.0 32.0 32.0 32.0 4 31.571489001011678 32.0 32.0 32.0 32.0 32.0 5 31.50775754242 32.0 32.0 32.0 32.0 32.0 6 35.08311258153877 36.0 36.0 36.0 36.0 36.0 7 35.09826309753771 36.0 36.0 36.0 36.0 36.0 8 35.039717094579345 36.0 36.0 36.0 36.0 36.0 9 35.182838779616525 36.0 36.0 36.0 36.0 36.0 10 35.039459751868016 36.0 36.0 36.0 36.0 36.0 11 35.18518703185742 36.0 36.0 36.0 36.0 36.0 12 35.08797582265227 36.0 36.0 36.0 36.0 36.0 13 35.14470434271187 36.0 36.0 36.0 36.0 36.0 14 35.10372466045506 36.0 36.0 36.0 36.0 36.0 15 35.05852938290826 36.0 36.0 36.0 36.0 36.0 16 35.07989633377779 36.0 36.0 36.0 36.0 36.0 17 35.0427333656084 36.0 36.0 36.0 36.0 36.0 18 35.05897973265309 36.0 36.0 36.0 36.0 36.0 19 35.04127669863614 36.0 36.0 36.0 36.0 36.0 20 35.03895203614378 36.0 36.0 36.0 36.0 36.0 21 35.03798807323759 36.0 36.0 36.0 36.0 36.0 22 35.02314744075354 36.0 36.0 36.0 36.0 36.0 23 34.984807665810465 36.0 36.0 36.0 36.0 36.0 24 34.958679874781325 36.0 36.0 36.0 32.0 36.0 25 34.934020009468064 36.0 36.0 36.0 32.0 36.0 26 34.899496948612416 36.0 36.0 36.0 32.0 36.0 27 34.88215365826068 36.0 36.0 36.0 32.0 36.0 28 34.87231566085876 36.0 36.0 36.0 32.0 36.0 29 34.84707034087723 36.0 36.0 36.0 32.0 36.0 30 34.82848054676748 36.0 36.0 36.0 32.0 36.0 31 34.83650374192386 36.0 36.0 36.0 32.0 36.0 32 34.80567515736775 36.0 36.0 36.0 32.0 36.0 33 34.79036004925968 36.0 36.0 36.0 32.0 36.0 34 34.77839039639892 36.0 36.0 36.0 32.0 36.0 35 34.753950344651585 36.0 36.0 36.0 32.0 36.0 36 34.737445562634264 36.0 36.0 36.0 32.0 36.0 37 34.7335125081961 36.0 36.0 36.0 32.0 36.0 38 34.69992231466902 36.0 36.0 36.0 32.0 36.0 39 34.70335569534269 36.0 36.0 36.0 32.0 36.0 40 34.701065345211845 36.0 36.0 36.0 32.0 36.0 41 34.66919613106679 36.0 36.0 36.0 32.0 36.0 42 34.65522617475607 36.0 36.0 36.0 32.0 36.0 43 34.64462472731055 36.0 36.0 36.0 32.0 36.0 44 34.61349751798316 36.0 36.0 36.0 32.0 36.0 45 34.580275110081026 36.0 36.0 36.0 32.0 36.0 46 34.581781101072956 36.0 36.0 36.0 32.0 36.0 47 34.56785564360608 36.0 36.0 36.0 32.0 36.0 48 34.52212316314938 36.0 36.0 36.0 32.0 36.0 49 34.515362019539815 36.0 36.0 36.0 32.0 36.0 50 33.9979031930333 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 8.0 21 42.0 22 107.0 23 375.0 24 1045.0 25 2454.0 26 5197.0 27 10135.0 28 17113.0 29 26938.0 30 40761.0 31 60092.0 32 90004.0 33 150736.0 34 335027.0 35 1125183.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.80222057068216 18.31445322763477 11.422544379777 26.46078182190607 2 16.765729935264844 20.49757176144607 35.949243433997914 26.78745486929117 3 18.54363149065436 24.04588030995051 28.638629295180518 28.771858904214614 4 12.481664321987374 15.83521694002196 36.16229970148229 35.52081903650837 5 14.530059789321987 36.605894437963215 33.38455170875652 15.479494063958278 6 34.34262905487094 35.82108036961283 16.54309603017379 13.293194545342443 7 30.239484199425586 30.403593790963733 20.86609761759624 18.490824392014442 8 28.3213695779097 32.4740767428133 19.460738348406647 19.743815330870348 9 27.352956787333593 13.950280315909625 18.703239354991936 39.993523541764844 10 15.945919429213868 26.557875035451637 31.467491450056485 26.028714085278015 11 37.783646621277846 21.233615177215306 22.068263370964345 18.914474830542506 12 24.520364118491305 23.952655374682948 28.487302013653103 23.039678493172644 13 29.21638608269172 19.333943450011446 25.426317688504874 26.02335277879196 14 23.366664575757138 19.840854978267945 24.882949276143204 31.909531169831713 15 25.29700297606123 27.303418315402446 21.91879014613313 25.480788562403195 16 26.09380034601872 25.88240403127357 23.37063194255682 24.65316368015089 17 24.208872211651514 25.89891685525062 24.859359527604564 25.0328514054933 18 25.133536741301416 24.877212678203126 25.85693782546481 24.132312755030647 19 25.59455548603728 25.15739455516436 25.071399199128034 24.176650759670324 20 25.694543852002205 24.51087460601099 24.633166006957904 25.1614155350289 21 27.038623388056187 24.30896780374616 24.17718689031893 24.475221917878724 22 25.946096352327906 24.39952027029563 24.831159055487912 24.823224321888553 23 24.60737812275998 24.216699719121156 25.406641693701054 25.769280464417815 24 24.81218003052728 25.172674278649616 24.998217365593387 25.01692832522972 25 24.85528493467516 24.67482335835455 25.2180845445865 25.251807162383788 26 24.65616601178308 25.482665019673313 25.490653366337533 24.37051560220607 27 25.44229438183332 24.93291665259324 24.682865318083632 24.94192364748981 28 24.583627535026757 24.75567186016426 25.674117274290335 24.98658333051865 29 24.633273233087625 24.88369985905125 25.39945754300974 25.083569364851382 30 24.461282521014983 25.162273344066673 25.693900495223883 24.682543639694472 31 25.11954373137281 24.883753472116112 24.664261584577023 25.332441211934054 32 24.883324567597228 24.9294318033773 24.55671377646676 25.63052985255871 33 24.549422399645728 24.571135690914247 25.10174419383911 25.777697715600915 34 25.292445865548085 24.723289568988488 25.40514052788496 24.57912403757847 35 25.827182574467205 24.592741756053048 25.21492137375973 24.365154295720014 36 24.523420063188357 25.200660298506822 24.948142763013635 25.327776875291185 37 25.67690515366309 24.946534371067816 24.63675808230356 24.739802392965537 38 24.730420106614943 24.602392107727947 25.315285031178682 25.351902754478434 39 25.28912185552673 24.67948769499742 24.594135695739425 25.437254753736426 40 25.518264094740715 24.75352733756984 25.265853785377253 24.462354782312193 41 24.38804707441547 25.22628734351017 25.569142893293378 24.816522688780985 42 25.648436616222135 25.345683638954608 24.933881687760728 24.07199805706253 43 24.79754366382035 24.28371605019684 25.37238294525516 25.54635734072765 44 24.451096038691478 24.904180049827982 25.074615983019672 25.57010792846087 45 24.697769750114865 25.048720872692027 25.24505191621136 25.008457460981752 46 24.557999542143445 24.791860232584696 25.132089471819036 25.518050753452826 47 24.749787692149326 24.539517139033766 25.621590207246776 25.089104961570136 48 25.530219808204624 25.168438846525632 24.655737107264194 24.64560423800555 49 24.326820954344722 25.209881745662837 25.12152741477265 25.34176988521979 50 24.300979457081937 25.404711623366076 25.045236023476086 25.249072896075898 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1.0 1 6.0 2 11.0 3 43.5 4 76.0 5 104.5 6 133.0 7 133.0 8 133.0 9 195.5 10 258.0 11 375.5 12 493.0 13 883.5 14 1274.0 15 1779.5 16 2285.0 17 2923.0 18 3561.0 19 4148.5 20 4736.0 21 5876.0 22 7016.0 23 7963.5 24 8911.0 25 11182.0 26 13453.0 27 16973.5 28 20494.0 29 23244.5 30 25995.0 31 27908.5 32 29822.0 33 34355.0 34 38888.0 35 45116.0 36 51344.0 37 62119.0 38 72894.0 39 78625.0 40 84356.0 41 92161.0 42 99966.0 43 100733.0 44 101500.0 45 110134.5 46 118769.0 47 126644.0 48 134519.0 49 138830.5 50 143142.0 51 137425.5 52 131709.0 53 129756.0 54 127803.0 55 129358.0 56 130913.0 57 128315.5 58 125718.0 59 115007.5 60 104297.0 61 91470.5 62 78644.0 63 68729.0 64 58814.0 65 50408.0 66 42002.0 67 37002.5 68 32003.0 69 29213.5 70 26424.0 71 20255.0 72 14086.0 73 12725.0 74 11364.0 75 8314.5 76 5265.0 77 4724.0 78 4183.0 79 3673.5 80 3164.0 81 2523.0 82 1882.0 83 1632.5 84 1383.0 85 1150.0 86 917.0 87 674.0 88 431.0 89 281.5 90 132.0 91 82.0 92 32.0 93 23.5 94 15.0 95 9.5 96 4.0 97 2.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015601401874419975 2 0.004235432123983429 3 8.578090377687959E-4 4 5.361306486054974E-5 5 5.361306486054974E-5 6 0.0011794874269320942 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.1445225944219897E-4 47 5.361306486054974E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1865217.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.78450651000605 #Duplication Level Percentage of deduplicated Percentage of total 1 78.00241723490673 41.17319100332143 2 13.549741935198742 14.304328827747998 3 3.878925401577776 6.142414893342299 4 1.5337990058851554 3.2384329444474313 5 0.7800769582217462 2.058798863978074 6 0.4516502075356668 1.4304079991947192 7 0.3229842232607366 1.1933993984734919 8 0.2249935715662688 0.9500939714439383 9 0.1738582671905745 0.8259320552705327 >10 0.8968870605760747 8.690463161659816 >50 0.08523621575325052 3.1462665195475 >100 0.08370980364964836 9.569597891213096 >500 0.011636968008057495 4.1325124346475075 >1k 0.004083146669493858 3.144160035712241 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2230 0.11955713463902592 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2194 0.11762706430404613 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2047 0.1097459437695453 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2006 0.10754780811026278 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1995 0.10695806439679674 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1973 0.10577857696986463 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1953 0.10470631567265365 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1929 0.10341960211600043 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 5.3613064860549735E-5 0.0 6 0.0 0.0 0.0 5.3613064860549735E-5 1.608391945816492E-4 7 0.0 0.0 0.0 5.3613064860549735E-5 1.608391945816492E-4 8 0.0 0.0 0.0 5.3613064860549735E-5 1.608391945816492E-4 9 0.0 0.0 0.0 1.0722612972109947E-4 1.608391945816492E-4 10 0.0 0.0 0.0 1.0722612972109947E-4 1.608391945816492E-4 11 0.0 0.0 0.0 1.0722612972109947E-4 1.608391945816492E-4 12 0.0 0.0 0.0 1.0722612972109947E-4 3.752914540238482E-4 13 0.0 0.0 0.0 1.0722612972109947E-4 4.8251758374494763E-4 14 0.0 0.0 0.0 1.0722612972109947E-4 4.8251758374494763E-4 15 0.0 0.0 0.0 1.0722612972109947E-4 4.8251758374494763E-4 16 0.0 0.0 0.0 1.0722612972109947E-4 4.8251758374494763E-4 17 0.0 0.0 0.0 1.0722612972109947E-4 4.8251758374494763E-4 18 0.0 0.0 0.0 1.0722612972109947E-4 5.361306486054973E-4 19 0.0 0.0 0.0 1.0722612972109947E-4 5.361306486054973E-4 20 0.0 0.0 0.0 2.1445225944219894E-4 6.433567783265968E-4 21 0.0 0.0 0.0 2.1445225944219894E-4 6.969698431871466E-4 22 0.0 0.0 0.0 3.216783891632984E-4 8.041959729082461E-4 23 0.0 0.0 0.0 3.752914540238482E-4 8.041959729082461E-4 24 0.0 0.0 0.0 7.505829080476964E-4 8.041959729082461E-4 25 0.0 0.0 0.0 9.114221026293455E-4 8.041959729082461E-4 26 0.0 0.0 0.0 9.650351674898953E-4 9.114221026293455E-4 27 0.0 0.0 0.0 0.0016083919458164922 9.114221026293455E-4 28 0.0 0.0 0.0 0.004557110513146728 9.114221026293455E-4 29 0.0 0.0 0.0 0.009864803934341151 9.650351674898953E-4 30 0.0 0.0 0.0 0.02262471337115199 9.650351674898953E-4 31 0.0 0.0 0.0 0.05227273823903599 0.0010722612972109947 32 0.0 0.0 0.0 0.08481586860938968 0.0011794874269320942 33 0.0 0.0 0.0 0.12406063208731209 0.0011794874269320942 34 0.0 0.0 0.0 0.16941728495933717 0.0011794874269320942 35 0.0 0.0 0.0 0.22024247044713832 0.0011794874269320942 36 0.0 0.0 0.0 0.29744528384632996 0.0011794874269320942 37 0.0 0.0 0.0 0.4075665190698991 0.0011794874269320942 38 0.0 0.0 0.0 0.558916201171231 0.0011794874269320942 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2830 0.0 21.30478 1 GTATAGG 190 0.0 19.688301 1 CGCAATA 680 0.0 19.411634 36 TATACGG 80 8.992369E-5 19.24987 5 CGAATGC 705 0.0 18.723278 43 ACCGTAT 60 0.00741386 18.33321 8 GGCGTTA 625 0.0 17.95188 42 ATACGAA 750 0.0 17.893213 40 GTATTAC 150 9.580617E-9 17.603657 1 CGTACAC 100 2.484328E-5 17.599882 3 TAGCGGC 765 0.0 17.254786 30 AATACGA 780 0.0 17.205013 39 CTAGCGG 780 0.0 17.205013 29 CGGCGTT 665 0.0 17.202892 41 TACGAAT 820 0.0 16.902325 41 AACGCAG 3475 0.0 16.776867 6 TCTAGCG 800 0.0 16.774889 28 CGGTCCA 820 0.0 16.634035 10 GCAATAC 810 0.0 16.567791 37 TTAACGG 270 0.0 16.296186 35 >>END_MODULE