##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062486_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1130264 Sequences flagged as poor quality 0 Sequence length 50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.177749623096904 32.0 32.0 32.0 32.0 32.0 2 31.4628732756241 32.0 32.0 32.0 32.0 32.0 3 31.55449523297212 32.0 32.0 32.0 32.0 32.0 4 31.65353492635349 32.0 32.0 32.0 32.0 32.0 5 31.613903477417665 32.0 32.0 32.0 32.0 32.0 6 35.194720879369775 36.0 36.0 36.0 36.0 36.0 7 35.217283749637254 36.0 36.0 36.0 36.0 36.0 8 35.165108328673654 36.0 36.0 36.0 36.0 36.0 9 35.28563415272892 36.0 36.0 36.0 36.0 36.0 10 35.19622406800535 36.0 36.0 36.0 36.0 36.0 11 35.290279969989314 36.0 36.0 36.0 36.0 36.0 12 35.22056086011764 36.0 36.0 36.0 36.0 36.0 13 35.25474667865207 36.0 36.0 36.0 36.0 36.0 14 35.22934464868385 36.0 36.0 36.0 36.0 36.0 15 35.197898897956584 36.0 36.0 36.0 36.0 36.0 16 35.22226931053276 36.0 36.0 36.0 36.0 36.0 17 35.21896477283183 36.0 36.0 36.0 36.0 36.0 18 35.22883326373307 36.0 36.0 36.0 36.0 36.0 19 35.183643821266536 36.0 36.0 36.0 36.0 36.0 20 35.14249768195749 36.0 36.0 36.0 36.0 36.0 21 35.12002151709689 36.0 36.0 36.0 36.0 36.0 22 35.11191721580091 36.0 36.0 36.0 36.0 36.0 23 35.10931251459836 36.0 36.0 36.0 36.0 36.0 24 35.092698696941596 36.0 36.0 36.0 36.0 36.0 25 35.07618927967271 36.0 36.0 36.0 36.0 36.0 26 35.042444950914124 36.0 36.0 36.0 36.0 36.0 27 35.00088386430073 36.0 36.0 36.0 36.0 36.0 28 34.976930168527 36.0 36.0 36.0 36.0 36.0 29 34.944673987670136 36.0 36.0 36.0 36.0 36.0 30 34.89638969302747 36.0 36.0 36.0 36.0 36.0 31 34.89544212679515 36.0 36.0 36.0 36.0 36.0 32 34.847647983126066 36.0 36.0 36.0 36.0 36.0 33 34.85075699128699 36.0 36.0 36.0 36.0 36.0 34 34.81607748278278 36.0 36.0 36.0 36.0 36.0 35 34.77921529837277 36.0 36.0 36.0 36.0 36.0 36 34.71687322607816 36.0 36.0 36.0 32.0 36.0 37 34.66430320703836 36.0 36.0 36.0 32.0 36.0 38 34.61955083060241 36.0 36.0 36.0 32.0 36.0 39 34.499902677604524 36.0 36.0 36.0 32.0 36.0 40 34.54715535485515 36.0 36.0 36.0 32.0 36.0 41 34.492143428437956 36.0 36.0 36.0 32.0 36.0 42 34.47862888670257 36.0 36.0 36.0 32.0 36.0 43 34.45235626366937 36.0 36.0 36.0 32.0 36.0 44 34.36782026146104 36.0 36.0 36.0 32.0 36.0 45 34.30587721098787 36.0 36.0 36.0 32.0 36.0 46 34.16032006681625 36.0 36.0 36.0 32.0 36.0 47 34.13052260356872 36.0 36.0 36.0 32.0 36.0 48 34.039691611871206 36.0 36.0 36.0 32.0 36.0 49 33.98335079238125 36.0 36.0 36.0 32.0 36.0 50 33.55803865291649 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 2.0 20 10.0 21 31.0 22 93.0 23 244.0 24 598.0 25 1636.0 26 3600.0 27 7089.0 28 12222.0 29 18653.0 30 26463.0 31 37660.0 32 53522.0 33 85986.0 34 178765.0 35 703689.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.693418707669 22.11635969779184 12.488474287706556 24.7017473068326 2 12.236830114022956 22.13524731222754 45.438595094190376 20.189327479559125 3 18.321552847621653 27.69542202273992 31.12790962071525 22.855115508923177 4 9.560438199284768 18.41484540752498 42.55181541978762 29.472900973402627 5 9.503708868016677 41.85818534430894 37.5180488806155 11.120056907058881 6 27.333911961771594 42.362148852608115 19.180824925968295 11.123114259651992 7 25.200307184870084 33.9530410594339 22.856164577479245 17.99048717821677 8 22.485454725621626 41.587098235456494 20.57758187467707 15.349865164244815 9 26.20016208602592 14.905367241635584 22.191010241855 36.703460430483496 10 14.379206981731702 29.244318141602317 36.090240864081316 20.28623401258467 11 32.375975878201906 22.79582469228428 28.815657226984136 16.012542202529676 12 23.81850611892443 26.441079252280886 33.78352314149615 15.956891487298543 13 28.459988108972773 23.347377249916835 28.380095269777676 19.812539371332715 14 18.54301295980408 26.54123284471592 28.587745871760934 26.32800832371906 15 20.876980953122455 36.387251120092294 24.61124126752688 18.12452665925837 16 18.860637868674928 29.35818534430894 32.80773341449431 18.973443372521817 17 17.37691371219467 31.122994273904148 31.23544587813113 20.26464613577005 18 17.41637351981484 28.532714480864644 36.74504363582313 17.30586836349738 19 22.783703630302302 26.769763524273976 29.3615473906981 21.084985454725622 20 21.56770453628533 30.5594091291946 31.001252804654488 16.87163352986559 21 21.157711826617497 27.112515306158564 28.598982184693135 23.130790682530808 22 20.881758597991265 31.96757571682368 28.95721707494886 18.193448610236192 23 19.817493966011483 31.301005782719788 30.858631257830027 18.0228689934387 24 22.09908481558291 29.32695370285172 31.114677632836223 17.459283848729147 25 20.18855771748901 30.57294578965622 32.115417283041836 17.12307920981293 26 16.36405300000708 31.559440980160385 34.21359965459397 17.862906365238565 27 17.88900646220706 31.54422329650418 31.832209112207416 18.73456112908135 28 17.217924307949293 31.56306845126448 30.50216586567386 20.716841375112363 29 19.34450712399935 28.857240432323778 29.60060658394853 22.197645859728347 30 18.318994500399906 29.61281612083549 31.451678545897245 20.616510832867366 31 21.14470601558574 27.813767403013813 31.088842960582657 19.95268362081779 32 17.743642193328284 31.585894976748797 31.45742941472081 19.213033415202112 33 18.2407826843994 31.491669202947275 32.6536986049277 17.61384950772563 34 18.603264370094067 30.74379083116865 33.56472470148567 17.088220097251615 35 18.371814018671746 32.17602259295174 31.496535322721066 17.955628065655457 36 17.26950517755144 30.17640126554504 33.10093924959124 19.453154307312275 37 18.433923401966265 30.064392035842953 29.224499762887255 22.277184799303527 38 19.121196463835 32.55655315926191 29.66828988625666 18.653960490646433 39 20.20589879886469 29.364732487277305 29.85859940686424 20.570769306993764 40 22.189152268850464 29.576541409794526 31.22120141842968 17.013104902925335 41 21.465162121415883 27.310522143499217 33.049004480369184 18.175311254715712 42 19.166407140278732 32.72677887643949 30.6524847292314 17.454329254050382 43 16.60797831303129 32.79410827912771 32.07648832485154 18.521425082989463 44 16.963735905947637 31.903873785239554 31.01762066207541 20.1147696467374 45 17.292951027370595 32.11426710927712 31.35037477969749 19.242407083654793 46 19.602871190156627 28.744371885127624 29.848805101113633 21.803951823602116 47 21.883913846676528 29.527260887721805 28.941910916387677 19.64691434921399 48 18.401895486364246 30.517472024235047 28.858567555898446 22.22206493350226 49 20.058322657361465 29.321999108172957 30.009095220231735 20.610583014233843 50 17.451763481806022 32.51143095772315 28.82468166729189 21.212123893178937 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 48.0 1 53.0 2 58.0 3 166.0 4 274.0 5 349.0 6 424.0 7 340.0 8 256.0 9 396.5 10 537.0 11 814.0 12 1091.0 13 2119.0 14 3147.0 15 4359.0 16 5571.0 17 7254.5 18 8938.0 19 10139.0 20 11340.0 21 13272.0 22 15204.0 23 15110.0 24 15016.0 25 19448.5 26 23881.0 27 34022.5 28 44164.0 29 51268.5 30 58373.0 31 62511.5 32 66650.0 33 80477.5 34 94305.0 35 108753.5 36 123202.0 37 127212.5 38 131223.0 39 118670.0 40 106117.0 41 97261.0 42 88405.0 43 73661.5 44 58918.0 45 54576.0 46 50234.0 47 45996.5 48 41759.0 49 35874.0 50 29989.0 51 29705.0 52 29421.0 53 26291.5 54 23162.0 55 21498.5 56 19835.0 57 19597.5 58 19360.0 59 16313.0 60 13266.0 61 12057.0 62 10848.0 63 9912.0 64 8976.0 65 8299.0 66 7622.0 67 6726.5 68 5831.0 69 5140.5 70 4450.0 71 3734.0 72 3018.0 73 2659.0 74 2300.0 75 1887.5 76 1475.0 77 1120.5 78 766.0 79 596.0 80 426.0 81 311.0 82 196.0 83 146.0 84 96.0 85 72.5 86 49.0 87 34.5 88 20.0 89 16.5 90 13.0 91 8.5 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016102432705987275 2 0.004689169963831459 3 4.423745248897603E-4 4 1.769498099559041E-4 5 0.0 6 4.423745248897603E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.847490497795205E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1130264.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.27705481293947 #Duplication Level Percentage of deduplicated Percentage of total 1 70.75513745214579 27.082982745528504 2 14.679500090121236 11.237760591522408 3 5.796257538544724 6.655910025383702 4 2.7569207664919086 4.221072291757675 5 1.5473582941197244 2.9614159119638597 6 0.9118079904960102 2.0940794658655184 7 0.6209092393590414 1.6636603892164605 8 0.461966171747217 1.4146163582153628 9 0.34620153419272165 1.192641759055669 >10 1.7565881107380565 12.275596363619949 >50 0.16912079051066364 4.531645334947448 >100 0.16631922847437883 13.221299013967542 >500 0.020964608578622562 5.375613634281909 >1k 0.010948184479947339 6.071706114673995 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2820 0.2494992320378248 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 2640 0.2335737491417934 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 2629 0.23260052518703594 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 2166 0.19163664418224416 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 2107 0.18641662478854498 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT 2065 0.182700678779471 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 1983 0.17544573657127893 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 1839 0.16270535025445385 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTA 1729 0.1529731107068791 No Hit GATATATTTTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATC 1719 0.15208836165709957 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 1718 0.15199988675212164 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTC 1648 0.14580664340366498 No Hit ATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGACT 1628 0.14403714530410594 No Hit GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGCTACCTTTGCAC 1457 0.12890793655287613 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1444 0.12775776278816275 No Hit GTATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGA 1433 0.1267845388334053 No Hit ATCTATAACTTTATAGATGCAACACTGTTAGTATGAGTAACAAGAATTCC 1416 0.1252804654487801 No Hit GTTATATAATTTAAGCTCCATAGGGTCTTCTCGTCTTATTATTATATTTC 1412 0.1249265658288683 No Hit GCCTAAAGGAAAGATCCAAAAAGATAAAAGGAACTCGGCAAACAAGAACC 1393 0.12324554263428722 No Hit GGTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCT 1375 0.12165299434468407 No Hit CTGTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGCATACGCGTATAA 1350 0.11944112172023527 No Hit CCTCTAGCATTACAAGTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTT 1349 0.11935264681525733 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 1347 0.11917569700530142 No Hit ATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGGTCTGAACTCAGAT 1277 0.11298245365684477 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 1277 0.11298245365684477 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 1274 0.11271702894191092 No Hit ACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATC 1269 0.11227465441702114 No Hit GATAGAAACCGACCTGGATTGCTCCGGTCTGAACTCAGATCACGTAGGAC 1230 0.10882413312288103 No Hit CCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATCC 1213 0.10732005973825584 No Hit GTTATAGATTAACCCAATTTTAAGTTTAGGAAGTTGGTGTAAATTATGGA 1183 0.10466581258891727 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1176 0.10404648825407162 No Hit AAATATATCTGGGTCAATAAGATATGTTGATTTTACTTTGACTTGTAAGT 1175 0.10395801334909366 No Hit GTACATGGGAGAAATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGG 1146 0.10139224110473305 No Hit GACTATAGGCAATAATCACACTATAAATAATCCACCTATAACTTCTCTGT 1145 0.1013037661997551 No Hit CACTATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATG 1139 0.10077291676988738 No Hit ATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTA 1132 0.10015359243504172 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 8.847490497795205E-5 0.0 8 0.0 0.0 0.0 8.847490497795205E-5 0.0 9 0.0 0.0 0.0 8.847490497795205E-5 0.0 10 0.0 0.0 0.0 8.847490497795205E-5 0.0 11 0.0 0.0 0.0 2.6542471493385615E-4 0.0 12 0.0 0.0 0.0 2.6542471493385615E-4 0.0 13 0.0 0.0 0.0 2.6542471493385615E-4 0.0 14 0.0 0.0 0.0 2.6542471493385615E-4 0.0 15 0.0 0.0 0.0 2.6542471493385615E-4 0.0 16 0.0 0.0 0.0 3.538996199118082E-4 0.0 17 0.0 0.0 0.0 5.308494298677123E-4 0.0 18 0.0 0.0 0.0 9.732239547574726E-4 0.0 19 0.0 0.0 0.0 0.0010616988597354246 0.0 20 0.0 0.0 0.0 0.0013271235746692808 0.0 21 0.0 0.0 0.0 0.0016810231945810891 0.0 22 0.0 0.0 0.0 0.0022118726244488014 0.0 23 0.0 0.0 0.0 0.005220019393699172 0.0 24 1.769498099559041E-4 0.0 0.0 0.008670540687839302 0.0 25 1.769498099559041E-4 0.0 0.0 0.010616988597354247 0.0 26 1.769498099559041E-4 0.0 0.0 0.012917336126781 0.0 27 1.769498099559041E-4 0.0 0.0 0.01548310837114161 0.0 28 1.769498099559041E-4 0.0 0.0 0.02149940190964235 0.0 29 1.769498099559041E-4 0.0 0.0 0.032912664651798165 0.0 30 1.769498099559041E-4 0.0 0.0 0.06202090838954439 0.0 31 1.769498099559041E-4 0.0 0.0 0.12094519510486046 0.0 32 1.769498099559041E-4 0.0 0.0 0.2000417601551496 0.0 33 1.769498099559041E-4 0.0 0.0 0.27020235980266555 0.0 34 1.769498099559041E-4 0.0 0.0 0.35071452333260195 0.0 35 1.769498099559041E-4 0.0 0.0 0.44918709257306255 0.0 36 1.769498099559041E-4 0.0 0.0 0.579422152700608 0.0 37 1.769498099559041E-4 0.0 0.0 0.7877805539236851 0.0 38 1.769498099559041E-4 0.0 0.0 1.029670944133406 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGACCGT 40 7.031973E-4 27.499916 6 TAGGACC 1600 0.0 26.124922 4 ATAGGAC 300 0.0 24.199928 3 TTTCGCC 110 2.0190782E-10 23.999926 43 TAAGACC 85 2.3524444E-7 23.294046 4 AGGACCT 2355 0.0 22.420313 5 GTCCTAT 265 0.0 22.417011 1 TCCTACA 3510 0.0 22.063587 2 ACTGTTC 1400 0.0 21.999935 8 GGACCTG 2380 0.0 21.999933 6 TGTAGGA 3975 0.0 21.862537 2 CCTAGAG 225 0.0 21.511045 3 CTGTAGG 3810 0.0 21.482151 1 GATATAC 1640 0.0 21.33109 1 CCTACAG 3395 0.0 21.319525 3 ATACACT 1655 0.0 21.135887 4 TAGGACA 950 0.0 21.07362 4 GTCCTAC 3720 0.0 20.996418 1 CAGTGAT 1260 0.0 20.603111 37 TTAGGAC 2055 0.0 20.34057 3 >>END_MODULE