##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062484_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1526249 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.087589901778806 32.0 32.0 32.0 32.0 32.0 2 30.91625285258172 32.0 32.0 32.0 32.0 32.0 3 31.219247318098162 32.0 32.0 32.0 32.0 32.0 4 31.437317239847495 32.0 32.0 32.0 32.0 32.0 5 31.253731206375893 32.0 32.0 32.0 32.0 32.0 6 34.86864659698385 36.0 36.0 36.0 32.0 36.0 7 34.89238191147054 36.0 36.0 36.0 32.0 36.0 8 34.8000876659051 36.0 36.0 36.0 32.0 36.0 9 35.02552139264301 36.0 36.0 36.0 36.0 36.0 10 34.793164156045314 36.0 36.0 36.0 32.0 36.0 11 35.03943327726996 36.0 36.0 36.0 36.0 36.0 12 34.89124513758895 36.0 36.0 36.0 32.0 36.0 13 34.97910563741565 36.0 36.0 36.0 32.0 36.0 14 34.92666399781425 36.0 36.0 36.0 32.0 36.0 15 34.85925559983987 36.0 36.0 36.0 32.0 36.0 16 34.87398648582243 36.0 36.0 36.0 32.0 36.0 17 34.834211848787454 36.0 36.0 36.0 32.0 36.0 18 34.86524217214885 36.0 36.0 36.0 32.0 36.0 19 34.85964544448514 36.0 36.0 36.0 32.0 36.0 20 34.85045428367193 36.0 36.0 36.0 32.0 36.0 21 34.850440524449155 36.0 36.0 36.0 32.0 36.0 22 34.824792022795755 36.0 36.0 36.0 32.0 36.0 23 34.76859870178457 36.0 36.0 36.0 32.0 36.0 24 34.74258852913253 36.0 36.0 36.0 32.0 36.0 25 34.71131709177205 36.0 36.0 36.0 32.0 36.0 26 34.64426053678004 36.0 36.0 36.0 32.0 36.0 27 34.6297904208291 36.0 36.0 36.0 32.0 36.0 28 34.620728989830624 36.0 36.0 36.0 32.0 36.0 29 34.58682626491483 36.0 36.0 36.0 32.0 36.0 30 34.56536187738698 36.0 36.0 36.0 32.0 36.0 31 34.569547301914696 36.0 36.0 36.0 32.0 36.0 32 34.52950534283725 36.0 36.0 36.0 32.0 36.0 33 34.52044325663768 36.0 36.0 36.0 32.0 36.0 34 34.49640065284236 36.0 36.0 36.0 32.0 36.0 35 34.47216083352061 36.0 36.0 36.0 32.0 36.0 36 34.434837303742704 36.0 36.0 36.0 32.0 36.0 37 34.42689561139762 36.0 36.0 36.0 32.0 36.0 38 34.38030688308395 36.0 36.0 36.0 32.0 36.0 39 34.36011948246977 36.0 36.0 36.0 32.0 36.0 40 34.338075897183224 36.0 36.0 36.0 32.0 36.0 41 34.307920922470714 36.0 36.0 36.0 32.0 36.0 42 34.27695546401669 36.0 36.0 36.0 32.0 36.0 43 34.269146122290664 36.0 36.0 36.0 32.0 36.0 44 34.22607975500721 36.0 36.0 36.0 32.0 36.0 45 34.16339601205308 36.0 36.0 36.0 32.0 36.0 46 34.19207612912441 36.0 36.0 36.0 32.0 36.0 47 34.17098848222014 36.0 36.0 36.0 32.0 36.0 48 34.12767379372566 36.0 36.0 36.0 32.0 36.0 49 34.12826740590821 36.0 36.0 36.0 32.0 36.0 50 33.50410319679161 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 6.0 21 26.0 22 121.0 23 356.0 24 1034.0 25 2334.0 26 5039.0 27 9589.0 28 16504.0 29 26942.0 30 40862.0 31 62427.0 32 98515.0 33 167807.0 34 349927.0 35 744757.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.2284996844814 17.635556685554096 11.53421984340055 26.60172378656395 2 16.71806887568397 19.66519438159768 36.154656109720946 27.4620806329974 3 18.882576365624608 22.93579724853775 28.612416240402084 29.569210145435555 4 12.615905147787254 15.06590016825575 35.75192236124142 36.56627232271558 5 15.071656066605122 35.873962898583386 33.12342874589926 15.930952288912229 6 35.91354718744001 35.02686007405112 15.69055517371742 13.369037564791453 7 31.194647793381026 29.96784928278413 20.043649496248648 18.793853427586193 8 28.603608325776676 32.99738967716911 18.6778295532574 19.721172443796814 9 26.937806347457066 13.886135224331023 18.086039696012904 41.090018732199006 10 15.584350915217634 26.371712610458715 31.441527562016418 26.60240891230723 11 38.596651005176746 20.404665293801994 21.538425250401474 19.46025845061979 12 24.637460859925213 23.210891538667674 28.334039858502774 23.817607742904336 13 29.667570625762902 18.680569160078072 25.139934571619705 26.511925642539325 14 23.444863845938638 19.151658739825546 24.443783419350314 32.959693994885505 15 25.543276359231033 27.05738054537628 21.648761113029394 25.750581982363297 16 26.48624176002736 25.447420440570312 23.169679390453325 24.896658408948998 17 24.468550020343994 25.841720453215693 24.728599330777612 24.9611301956627 18 25.718280568898 24.276641622697216 25.69803485538729 24.307042953017497 19 25.85194159013372 25.092825613644955 24.590417422058916 24.464815374162406 20 25.72162209442889 24.07103952238462 24.676248764126953 25.53108961905954 21 26.733449129205 24.181244344795637 23.894135229572633 25.191171296426727 22 25.770696655657105 24.364635128344066 24.4977719887122 25.366896227286635 23 24.350482784919105 23.845977949862704 25.22537279303705 26.57816647218115 24 24.954250584275567 24.96296475869927 24.589172539998387 25.493612117026775 25 25.304455563934848 24.236936436977192 24.706912174881033 25.751695824206926 26 24.869729644376505 24.98517607546344 25.103570911430573 25.04152336872948 27 25.76755169045156 24.54180150158985 24.388418927711008 25.302227880247585 28 24.850597772709435 24.174823374167648 25.278837201531335 25.69574165159158 29 24.797526484865838 24.69655999774611 25.189074652956368 25.31683886443169 30 24.951498739720716 24.659868737014733 25.51444751151352 24.87418501175103 31 25.429795531397563 24.497182307736157 24.344258374616462 25.72876378624982 32 25.09027032941545 24.478115956177533 24.37262858157483 26.05898513283219 33 24.598869516048826 24.087550589713736 25.125978788520094 26.187601105717352 34 25.368272149564064 24.28843524221801 25.339246741521205 25.004045866696718 35 26.164669067760244 24.18805843607432 24.97639638093129 24.670876115234147 36 24.76568371215968 24.924635495256673 24.78448798328451 25.525192809299135 37 26.14173702980313 24.425503309093077 24.54501198690384 24.88774767419995 38 24.9785585445101 24.30796023453578 24.996314493899753 25.71716672705437 39 25.555397579294077 24.24447124944881 24.495609825133382 25.704521346123734 40 25.894464140517044 24.459442725269597 24.826486372800243 24.819606761413112 41 24.573447713970655 24.69629791731231 25.5566424613546 25.17361190736243 42 26.294726483031273 24.892334081791372 24.63025364799584 24.182685787181516 43 25.260753651599444 23.784913208788343 25.034381676908552 25.91995146270366 44 25.003128585178438 24.417902976513005 24.91251427519363 25.66645416311493 45 25.01308764166266 24.807813141892314 24.86298107320627 25.316118143238754 46 24.825323276426897 24.302079347524124 25.178870013261278 25.693727362787698 47 25.211941170805023 24.06920495934805 25.456527735644706 25.26232613420222 48 25.984292209200465 25.081556154991745 24.12666609445772 24.80748554135007 49 24.785994945778832 24.79805064573343 24.903669060553028 25.51228534793471 50 24.82329215173419 25.10850137068157 24.573267254076665 25.494939223507586 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 11.0 2 13.0 3 42.5 4 72.0 5 100.0 6 128.0 7 127.0 8 126.0 9 168.0 10 210.0 11 331.0 12 452.0 13 798.5 14 1145.0 15 1498.5 16 1852.0 17 2246.0 18 2640.0 19 2907.0 20 3174.0 21 3912.5 22 4651.0 23 5160.5 24 5670.0 25 7370.5 26 9071.0 27 11369.5 28 13668.0 29 15813.5 30 17959.0 31 19604.5 32 21250.0 33 24776.0 34 28302.0 35 32840.0 36 37378.0 37 45721.5 38 54065.0 39 58396.5 40 62728.0 41 69362.5 42 75997.0 43 77819.5 44 79642.0 45 89471.5 46 99301.0 47 107120.5 48 114940.0 49 117387.5 50 119835.0 51 115154.0 52 110473.0 53 109075.5 54 107678.0 55 109013.5 56 110349.0 57 108154.5 58 105960.0 59 97420.0 60 88880.0 61 78750.5 62 68621.0 63 59872.5 64 51124.0 65 44113.5 66 37103.0 67 32599.0 68 28095.0 69 26054.5 70 24014.0 71 18628.5 72 13243.0 73 11871.0 74 10499.0 75 7783.0 76 5067.0 77 4472.5 78 3878.0 79 3372.5 80 2867.0 81 2269.0 82 1671.0 83 1420.5 84 1170.0 85 936.5 86 703.0 87 520.0 88 337.0 89 240.0 90 143.0 91 102.0 92 61.0 93 39.0 94 17.0 95 11.5 96 6.0 97 6.0 98 6.0 99 6.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012448820605287866 2 0.0032760054224441754 3 3.9312065069330106E-4 4 6.55201084488835E-5 5 0.0 6 3.9312065069330106E-4 7 0.0 8 6.55201084488835E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 6.55201084488835E-5 47 0.0 48 0.0 49 0.0 50 6.55201084488835E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1526249.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.59871805008634 #Duplication Level Percentage of deduplicated Percentage of total 1 82.06289614803129 46.44654721455939 2 10.889736037169287 12.32690199215218 3 2.984452885265718 5.067486221607631 4 1.2236650729909089 2.770314978158031 5 0.6919931724612667 1.9582963230360004 6 0.4411571558659552 1.4981357688381114 7 0.3083050716871232 1.2214770278081801 8 0.20530930883927617 0.9296194947241833 9 0.16138658320335433 0.8220846347814106 >10 0.8677353354544072 8.741820620384832 >50 0.07563643635031438 3.0172309056880353 >100 0.07482931396493699 9.020567498720466 >500 0.009760254163686564 3.7538767425823476 >1k 0.0031372245526135384 2.4256405769591862 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2327 0.15246529236055192 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1803 0.11813275553333696 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1788 0.11714995390660371 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1734 0.113611868050364 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1678 0.10994274197722652 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1674 0.109680661543431 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1573 0.10306313059009375 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3104021689776702E-4 2 0.0 0.0 0.0 0.0 1.3104021689776702E-4 3 0.0 0.0 0.0 0.0 1.3104021689776702E-4 4 0.0 0.0 0.0 0.0 1.965603253466505E-4 5 0.0 0.0 0.0 0.0 1.965603253466505E-4 6 0.0 0.0 0.0 0.0 1.965603253466505E-4 7 0.0 0.0 0.0 6.552010844888351E-5 1.965603253466505E-4 8 0.0 0.0 0.0 6.552010844888351E-5 1.965603253466505E-4 9 0.0 0.0 0.0 6.552010844888351E-5 1.965603253466505E-4 10 0.0 0.0 0.0 6.552010844888351E-5 1.965603253466505E-4 11 0.0 0.0 0.0 1.965603253466505E-4 1.965603253466505E-4 12 0.0 0.0 0.0 1.965603253466505E-4 3.93120650693301E-4 13 0.0 0.0 0.0 1.965603253466505E-4 4.586407591421845E-4 14 0.0 0.0 0.0 1.965603253466505E-4 4.586407591421845E-4 15 0.0 0.0 0.0 1.965603253466505E-4 5.241608675910681E-4 16 0.0 0.0 0.0 1.965603253466505E-4 5.241608675910681E-4 17 0.0 0.0 0.0 2.6208043379553404E-4 5.241608675910681E-4 18 0.0 0.0 0.0 3.2760054224441755E-4 5.241608675910681E-4 19 0.0 0.0 0.0 4.586407591421845E-4 5.241608675910681E-4 20 0.0 0.0 0.0 7.86241301386602E-4 6.552010844888351E-4 21 0.0 0.0 0.0 8.517614098354856E-4 7.86241301386602E-4 22 0.0 0.0 0.0 0.0012448820605287865 8.517614098354856E-4 23 0.0 0.0 0.0 0.001572482602773204 8.517614098354856E-4 24 0.0 0.0 0.0 0.0020966434703642723 8.517614098354856E-4 25 0.0 0.0 0.0 0.002489764121057573 8.517614098354856E-4 26 0.0 0.0 0.0 0.003538085856239709 8.517614098354856E-4 27 0.0 0.0 0.0 0.0038001662900352434 9.17281518284369E-4 28 0.0 0.0 0.0 0.005503689109706215 9.17281518284369E-4 29 0.0 0.0 0.0 0.010417697243372477 9.17281518284369E-4 30 0.0 0.0 0.0 0.020049153185358354 9.17281518284369E-4 31 0.0 0.0 0.0 0.0440950329860986 9.17281518284369E-4 32 0.0 0.0 0.0 0.07023755625720311 9.828016267332525E-4 33 0.0 0.0 0.0 0.10149064798732055 9.828016267332525E-4 34 0.0 0.0 0.0 0.1370025467666154 0.0011138418436310196 35 0.0 0.0 0.0 0.17631461183594552 0.001179361952079903 36 0.0 0.0 0.0 0.23718279258495828 0.001179361952079903 37 0.0 0.0 0.0 0.31606900315741404 0.001179361952079903 38 0.0 0.0 0.0 0.4328913565217733 0.0012448820605287865 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAATA 25 0.0023530715 35.199738 42 TTAGGAC 320 0.0 22.688074 3 TAACGCA 50 0.0025803659 22.000557 4 TTAACGG 220 0.0 21.999838 35 CGTCTTA 290 0.0 21.24122 15 TAACGGC 250 0.0 20.23985 36 TTGCGAT 55 0.004484334 19.999853 11 TACCGTA 55 0.004484334 19.999853 7 CGCAATA 610 0.0 19.475266 36 TACCGTC 400 0.0 19.249857 7 CTAGCGG 640 0.0 18.906109 29 GTATACG 70 8.1161223E-4 18.860092 1 ATTTCGT 105 1.7934435E-6 18.857002 42 AGCGAAA 585 0.0 18.80328 17 TATACCG 95 1.5972093E-5 18.526785 5 TAGCGGC 645 0.0 18.418467 30 ACCGTTA 60 0.007413288 18.333199 8 GGCGTTA 445 0.0 18.292 42 GCGAAAG 610 0.0 18.032654 18 ACCGTCG 355 0.0 17.971697 8 >>END_MODULE