##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062483_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1379086 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23752543351176 32.0 32.0 32.0 32.0 32.0 2 31.35176413943728 32.0 32.0 32.0 32.0 32.0 3 31.45463444629269 32.0 32.0 32.0 32.0 32.0 4 31.56540781358088 32.0 32.0 32.0 32.0 32.0 5 31.49246674971684 32.0 32.0 32.0 32.0 32.0 6 35.070577179378226 36.0 36.0 36.0 36.0 36.0 7 35.08299627434402 36.0 36.0 36.0 36.0 36.0 8 35.02111035859983 36.0 36.0 36.0 36.0 36.0 9 35.158974132142596 36.0 36.0 36.0 36.0 36.0 10 35.025986776749235 36.0 36.0 36.0 36.0 36.0 11 35.16689242005212 36.0 36.0 36.0 36.0 36.0 12 35.07387066506367 36.0 36.0 36.0 36.0 36.0 13 35.11319453609129 36.0 36.0 36.0 36.0 36.0 14 35.07441740399076 36.0 36.0 36.0 36.0 36.0 15 35.03756691025795 36.0 36.0 36.0 36.0 36.0 16 35.060299357690525 36.0 36.0 36.0 36.0 36.0 17 35.030870446078055 36.0 36.0 36.0 36.0 36.0 18 35.04120482696511 36.0 36.0 36.0 36.0 36.0 19 35.02404998673034 36.0 36.0 36.0 36.0 36.0 20 34.99911680634855 36.0 36.0 36.0 36.0 36.0 21 34.98318959078694 36.0 36.0 36.0 36.0 36.0 22 34.975455482834285 36.0 36.0 36.0 36.0 36.0 23 34.934080253153176 36.0 36.0 36.0 32.0 36.0 24 34.920376249196934 36.0 36.0 36.0 32.0 36.0 25 34.89366943033284 36.0 36.0 36.0 32.0 36.0 26 34.85526283349987 36.0 36.0 36.0 32.0 36.0 27 34.83475142231884 36.0 36.0 36.0 32.0 36.0 28 34.80995456410985 36.0 36.0 36.0 32.0 36.0 29 34.78131023010893 36.0 36.0 36.0 32.0 36.0 30 34.774204799410626 36.0 36.0 36.0 32.0 36.0 31 34.75679906836847 36.0 36.0 36.0 32.0 36.0 32 34.72441167555903 36.0 36.0 36.0 32.0 36.0 33 34.69501974496152 36.0 36.0 36.0 32.0 36.0 34 34.675526399368856 36.0 36.0 36.0 32.0 36.0 35 34.64872749052633 36.0 36.0 36.0 32.0 36.0 36 34.61222577852288 36.0 36.0 36.0 32.0 36.0 37 34.59609770529177 36.0 36.0 36.0 32.0 36.0 38 34.55744166788728 36.0 36.0 36.0 32.0 36.0 39 34.520840614725984 36.0 36.0 36.0 32.0 36.0 40 34.512163853450765 36.0 36.0 36.0 32.0 36.0 41 34.4769622779145 36.0 36.0 36.0 32.0 36.0 42 34.44470250586258 36.0 36.0 36.0 32.0 36.0 43 34.43493516720495 36.0 36.0 36.0 32.0 36.0 44 34.39047311045142 36.0 36.0 36.0 32.0 36.0 45 34.33005483341866 36.0 36.0 36.0 32.0 36.0 46 34.325880329435584 36.0 36.0 36.0 32.0 36.0 47 34.28467187688077 36.0 36.0 36.0 32.0 36.0 48 34.23197683103157 36.0 36.0 36.0 32.0 36.0 49 34.21224854722621 36.0 36.0 36.0 32.0 36.0 50 33.6710778008043 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 2.0 21 26.0 22 133.0 23 367.0 24 967.0 25 2297.0 26 4614.0 27 8660.0 28 14996.0 29 23266.0 30 33980.0 31 49044.0 32 72653.0 33 117338.0 34 249078.0 35 801663.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.95728719747274 18.200080644927347 11.68357889423621 26.159053263363706 2 15.605722535765848 21.06691688922503 37.93562038492022 25.391740190088896 3 18.945325104653175 24.861737434911273 28.824092020834197 27.36884543960136 4 12.310055080038634 16.22033175644123 36.71001911413663 34.7595940493835 5 13.799004412345866 37.37565124702248 33.83903095168173 14.98631338894992 6 33.07772796192241 36.30618695520707 17.198289583120328 13.417795499750195 7 29.138232958809645 30.909044765188515 21.230888596424442 18.7218336795774 8 27.321646365781394 34.0247091189382 19.940960897289944 18.712683617990468 9 27.54302487299559 14.033715083758375 18.728926259856166 39.694333783389865 10 15.41288940646196 27.66926790642498 32.42060321111229 24.49723947600077 11 37.23502377661727 21.29809163460437 22.544279327032545 18.922605261745822 12 24.150995659444007 24.04404076323014 29.97586807494239 21.829095502383463 13 30.072888855372327 20.178654558163885 25.390222219644027 24.358234366819765 14 22.84230280055051 20.280751164176852 25.848931828761952 31.02801420651069 15 24.75023312541785 28.365526152828757 22.859488095738772 24.02475262601462 16 24.701360176232665 26.3473779010156 25.258758337043517 23.692503585708216 17 23.149317736529845 26.408070272629843 26.400819093225515 24.041792897614798 18 23.81722387146269 25.769531414284536 27.79340809782711 22.619836616425662 19 25.086035243632377 25.44707146617397 25.899472549210127 23.567420740983522 20 25.22359011693252 25.15281860594626 26.215261412268703 23.40832986485252 21 25.85531286663776 24.85457759704616 24.891341076626112 24.39876845968997 22 24.869442514825035 25.692451377216504 25.838997712978017 23.599108394980444 23 23.953691067852187 25.3856539766193 26.01418620738663 24.646468748141885 24 24.133375293491486 25.80905034203813 26.11229466472722 23.945279699743164 25 24.473093048584353 25.394717950874714 26.159934913413668 23.972254087127272 26 23.320010499707777 26.269862793183314 26.69710228368644 23.713024423422468 27 24.3058808515205 25.87336830335454 26.17777281474832 23.64297803037664 28 23.410650242261905 26.033474344602148 26.195755739671057 24.36011967346489 29 23.54370938433136 25.720585953305303 26.03637481636388 24.69932984599945 30 23.651896981043965 26.090758661896356 26.341576957492137 23.91576739956754 31 24.318425391889992 25.61479124579613 25.619069441644683 24.447713920669198 32 23.80243146547786 26.0859728834895 25.906651216820414 24.204944434212226 33 23.630578513595236 25.60579978333476 26.398063645051867 24.365558058018134 34 23.915259817009236 26.104753438146716 26.585796679829976 23.394190065014076 35 24.404206844243216 25.80919536562622 26.337661320613797 23.448936469516767 36 23.450749264367847 26.394293031761617 26.2196121199113 23.93534558395923 37 24.319150509830422 25.93681612314243 25.639300232182766 24.104733134844384 38 23.752688374764155 26.107726421702488 25.893236534922405 24.24634866861095 39 24.401306372481486 25.308501427757225 25.993955416848554 24.296236782912743 40 24.98785427449775 25.653657567403336 25.975247373985376 23.383240784113536 41 23.772049023773718 25.64778411208583 26.87163817194867 23.708528692191784 42 24.422189769165957 26.400238998873167 26.214536294328273 22.963034937632607 43 23.55161316988208 25.565483225846684 26.513574932962847 24.369328671308388 44 23.161354694341036 26.04014542965413 26.314602570108026 24.483897305896804 45 23.408547400234646 26.138398910582804 26.187344371562034 24.26570931762051 46 23.492533092594 25.336871911448533 26.25175388029019 24.918841115667274 47 23.896334238763934 25.36904877578338 26.60892794212979 24.125689043322897 48 23.72636659352644 26.05464778846279 25.740961767431475 24.478023850579298 49 23.481494265042212 25.80854275947983 26.42221007246829 24.287752903009675 50 23.212620532729648 26.650114641146384 25.541191774842176 24.596073051281792 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 13.0 2 19.0 3 63.5 4 108.0 5 133.0 6 158.0 7 160.0 8 162.0 9 239.0 10 316.0 11 471.5 12 627.0 13 1168.0 14 1709.0 15 2486.5 16 3264.0 17 4100.5 18 4937.0 19 5699.5 20 6462.0 21 7314.5 22 8167.0 23 9176.0 24 10185.0 25 11373.0 26 12561.0 27 15915.5 28 19270.0 29 22966.0 30 26662.0 31 30633.0 32 34604.0 33 39930.0 34 45256.0 35 51791.0 36 58326.0 37 62867.5 38 67409.0 39 68376.0 40 69343.0 41 72662.0 42 75981.0 43 76416.0 44 76851.0 45 82069.5 46 87288.0 47 92085.0 48 96882.0 49 97482.5 50 98083.0 51 92601.5 52 87120.0 53 83983.0 54 80846.0 55 80266.0 56 79686.0 57 77212.5 58 74739.0 59 68122.5 60 61506.0 61 54707.5 62 47909.0 63 42817.0 64 37725.0 65 32739.5 66 27754.0 67 25408.5 68 23063.0 69 20908.0 70 18753.0 71 15213.0 72 11673.0 73 10291.0 74 8909.0 75 6924.5 76 4940.0 77 4286.0 78 3632.0 79 3117.0 80 2602.0 81 1996.0 82 1390.0 83 1207.0 84 1024.0 85 843.0 86 662.0 87 502.0 88 342.0 89 229.5 90 117.0 91 73.0 92 29.0 93 19.0 94 9.0 95 9.0 96 9.0 97 6.5 98 4.0 99 5.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01464738239674683 2 0.003408054320035154 3 5.07582558303108E-4 4 1.450235880866023E-4 5 7.251179404330115E-5 6 5.07582558303108E-4 7 7.251179404330115E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 7.251179404330115E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1379086.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.78411472667885 #Duplication Level Percentage of deduplicated Percentage of total 1 78.61567117807027 47.785839762026825 2 13.686139448910476 16.63799740855799 3 3.892382972933865 7.0978515956095 4 1.4451541352570973 3.51369659020807 5 0.6860048193424249 2.0849097820982276 6 0.39755007614913895 1.4498837662949509 7 0.24947723813022868 1.0614977144941962 8 0.15840788195010794 0.7702946296052449 9 0.12798851442980722 0.7001701690318733 >10 0.6130198301713129 6.984115912020478 >50 0.06449114663667178 2.7614875247255735 >100 0.05904212355898589 7.1118849466989165 >500 0.0043113548858507615 1.8034953680479118 >1k 3.5927957382089683E-4 0.2368748305803392 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 7.251179404330115E-5 0.0 4 0.0 0.0 0.0 7.251179404330115E-5 0.0 5 0.0 0.0 0.0 1.450235880866023E-4 0.0 6 0.0 0.0 0.0 1.450235880866023E-4 0.0 7 0.0 0.0 0.0 1.450235880866023E-4 0.0 8 0.0 0.0 0.0 1.450235880866023E-4 0.0 9 0.0 0.0 0.0 2.1753538212990344E-4 7.251179404330115E-5 10 0.0 0.0 0.0 2.1753538212990344E-4 7.251179404330115E-5 11 0.0 0.0 0.0 2.1753538212990344E-4 7.251179404330115E-5 12 0.0 0.0 0.0 2.1753538212990344E-4 1.450235880866023E-4 13 0.0 0.0 0.0 2.1753538212990344E-4 1.450235880866023E-4 14 0.0 0.0 0.0 2.1753538212990344E-4 1.450235880866023E-4 15 0.0 0.0 0.0 2.1753538212990344E-4 2.1753538212990344E-4 16 0.0 0.0 0.0 2.1753538212990344E-4 2.1753538212990344E-4 17 0.0 0.0 0.0 2.900471761732046E-4 2.1753538212990344E-4 18 0.0 0.0 0.0 3.6255897021650574E-4 2.1753538212990344E-4 19 0.0 0.0 0.0 3.6255897021650574E-4 2.1753538212990344E-4 20 0.0 0.0 0.0 5.800943523464092E-4 2.1753538212990344E-4 21 0.0 0.0 0.0 8.701415285196138E-4 3.6255897021650574E-4 22 0.0 0.0 0.0 0.001450235880866023 3.6255897021650574E-4 23 0.0 0.0 0.0 0.002392889203428938 4.350707642598069E-4 24 0.0 0.0 0.0 0.0037706132902516594 4.350707642598069E-4 25 0.0 0.0 0.0 0.00442321943664137 5.07582558303108E-4 26 0.0 0.0 0.0 0.005800943523464092 5.800943523464092E-4 27 0.0 0.0 0.0 0.007831273756676523 5.800943523464092E-4 28 0.0 0.0 0.0 0.013559705486097313 5.800943523464092E-4 29 0.0 0.0 0.0 0.02661182841389152 5.800943523464092E-4 30 0.0 0.0 0.0 0.052933609651609835 5.800943523464092E-4 31 0.0 0.0 0.0 0.10456200701044024 5.800943523464092E-4 32 0.0 0.0 0.0 0.1706927631779309 5.800943523464092E-4 33 0.0 0.0 0.0 0.23580835422881533 5.800943523464092E-4 34 0.0 0.0 0.0 0.3207921768475643 5.800943523464092E-4 35 0.0 0.0 0.0 0.4129546670766 5.800943523464092E-4 36 0.0 0.0 0.0 0.5378924882132079 5.800943523464092E-4 37 0.0 0.0 0.0 0.7156914072073823 5.800943523464092E-4 38 0.0 0.0 0.0 0.9512822260540676 6.526061463897103E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAG 70 3.207154E-5 22.007654 1 ATACGAA 270 0.0 20.37007 40 CGTAACA 55 0.0044824295 20.001154 2 CAATACG 265 0.0 19.094057 38 TAGGACA 405 0.0 19.013443 4 GTCCTAC 1030 0.0 18.802654 1 TAAACGC 235 0.0 18.723127 28 CGAATGC 285 0.0 18.526041 43 TATACCG 60 0.0074117016 18.333725 5 TCCTACA 1060 0.0 18.265203 2 CGCAATA 280 0.0 18.071161 36 TGTAGGA 1040 0.0 17.981808 2 CCATTAG 125 4.836038E-7 17.606123 1 TTAGGAC 625 0.0 17.601015 3 AATACGA 300 0.0 17.59974 39 GATTTCG 415 0.0 17.493715 41 GTAGGAC 1090 0.0 17.156954 3 CCTACAG 1180 0.0 16.967081 3 GTCCTAA 665 0.0 16.878048 1 TACGAAT 300 0.0 16.866417 41 >>END_MODULE