##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062482_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1932630 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.294007647609735 32.0 32.0 32.0 32.0 32.0 2 31.414361259009745 32.0 32.0 32.0 32.0 32.0 3 31.49210557633898 32.0 32.0 32.0 32.0 32.0 4 31.590178151017007 32.0 32.0 32.0 32.0 32.0 5 31.53284022290868 32.0 32.0 32.0 32.0 32.0 6 35.11442438542297 36.0 36.0 36.0 36.0 36.0 7 35.12469588074282 36.0 36.0 36.0 36.0 36.0 8 35.06610577296223 36.0 36.0 36.0 36.0 36.0 9 35.20022145987592 36.0 36.0 36.0 36.0 36.0 10 35.07219333240196 36.0 36.0 36.0 36.0 36.0 11 35.20095983193886 36.0 36.0 36.0 36.0 36.0 12 35.110077976643225 36.0 36.0 36.0 36.0 36.0 13 35.15047370681403 36.0 36.0 36.0 36.0 36.0 14 35.117175041265014 36.0 36.0 36.0 36.0 36.0 15 35.076343635357 36.0 36.0 36.0 36.0 36.0 16 35.09331066991612 36.0 36.0 36.0 36.0 36.0 17 35.06785985936263 36.0 36.0 36.0 36.0 36.0 18 35.072157629758415 36.0 36.0 36.0 36.0 36.0 19 35.057729104898506 36.0 36.0 36.0 36.0 36.0 20 35.04884897781779 36.0 36.0 36.0 36.0 36.0 21 35.047301863264046 36.0 36.0 36.0 36.0 36.0 22 35.02892069356266 36.0 36.0 36.0 36.0 36.0 23 34.990155384113876 36.0 36.0 36.0 36.0 36.0 24 34.969387829020555 36.0 36.0 36.0 36.0 36.0 25 34.94826686949908 36.0 36.0 36.0 32.0 36.0 26 34.90149692388093 36.0 36.0 36.0 32.0 36.0 27 34.886035092076604 36.0 36.0 36.0 32.0 36.0 28 34.8752425451328 36.0 36.0 36.0 32.0 36.0 29 34.846717685226864 36.0 36.0 36.0 32.0 36.0 30 34.838512803795865 36.0 36.0 36.0 32.0 36.0 31 34.83496478891459 36.0 36.0 36.0 32.0 36.0 32 34.801090224202255 36.0 36.0 36.0 32.0 36.0 33 34.78510941049244 36.0 36.0 36.0 32.0 36.0 34 34.76833330746185 36.0 36.0 36.0 32.0 36.0 35 34.74859854188334 36.0 36.0 36.0 32.0 36.0 36 34.708312506791266 36.0 36.0 36.0 32.0 36.0 37 34.706095838313594 36.0 36.0 36.0 32.0 36.0 38 34.67300983633701 36.0 36.0 36.0 32.0 36.0 39 34.66194460398524 36.0 36.0 36.0 32.0 36.0 40 34.65665129900705 36.0 36.0 36.0 32.0 36.0 41 34.62034740224461 36.0 36.0 36.0 32.0 36.0 42 34.60371462721783 36.0 36.0 36.0 32.0 36.0 43 34.58729399833388 36.0 36.0 36.0 32.0 36.0 44 34.54828860154298 36.0 36.0 36.0 32.0 36.0 45 34.515377490776814 36.0 36.0 36.0 32.0 36.0 46 34.50737181974822 36.0 36.0 36.0 32.0 36.0 47 34.490180738165094 36.0 36.0 36.0 32.0 36.0 48 34.44286904373833 36.0 36.0 36.0 32.0 36.0 49 34.437647661476845 36.0 36.0 36.0 32.0 36.0 50 33.92253302494528 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 16.0 21 55.0 22 153.0 23 500.0 24 1265.0 25 2905.0 26 6073.0 27 11375.0 28 19197.0 29 29653.0 30 43421.0 31 62239.0 32 92105.0 33 151622.0 34 332445.0 35 1179602.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.94627606254234 18.13687463224316 11.522970021057557 26.393879284156945 2 16.310670267422903 20.51365108506502 36.5433982024851 26.63228044502698 3 18.6066354585518 23.915757752312018 28.73290465726008 28.744702131876103 4 12.311545178190284 15.61244421447513 36.204592199728346 35.871418407606235 5 14.323494059128784 36.68727934849368 33.55341351081868 15.43581308155885 6 34.490448727169614 35.487901928054214 16.55890287909379 13.462746465682374 7 30.21335186422226 30.57808818971463 20.67986147367136 18.528698472391753 8 28.070660188447867 32.99379601889653 19.49090100019145 19.444642792464155 9 27.34651743996523 13.998385619596093 18.759721208922556 39.89537573151612 10 15.848972643496168 26.827276819670605 31.69209833232435 25.63165220450888 11 37.75078519944324 21.06155860149123 22.083171636578133 19.104484562487386 12 24.5150908347692 23.86752766954875 28.656390514480268 22.960990981201782 13 29.517807340256542 19.411268582191106 25.376404174622145 25.694519902930203 14 23.265136109860656 19.902930203919013 25.090627797353864 31.741305888866467 15 25.12043174327212 27.38584209082959 22.326104841588922 25.16762132430936 16 25.615404914546495 25.910081081220927 23.905248288601545 24.56926571563103 17 23.861939429689077 26.04337095046646 25.25423904213429 24.840450577710165 18 24.705194475921413 24.828032266910892 26.487480790425483 23.979292466742212 19 25.361812659433003 25.13579940288622 25.531684802574727 23.970703135106046 20 25.51636888592229 24.486373491045878 25.281404097007705 24.715853526024123 21 26.556764616093098 24.29658030766365 24.64631098554819 24.500344090695066 22 25.58094410207851 24.66421405028381 25.127986215675012 24.626855631962663 23 24.247993666661493 24.37600575381734 25.69063918080543 25.685361398715738 24 24.55814097887335 25.162291799258007 25.44822340541128 24.831343816457366 25 24.706850250694647 24.692620936237148 25.569715879397503 25.0308129336707 26 24.2290557426926 25.541153764559176 25.926431857106635 24.303358635641587 27 25.06051339366563 25.080537919829453 25.104753625888037 24.75419506061688 28 24.250477328821347 24.856076952132586 25.9446971225739 24.948748596472164 29 24.28235099320615 25.030398989977385 25.73296492344629 24.954285093370174 30 24.245199546731655 25.21284467280338 26.07959102363101 24.462364756833953 31 24.75647175093008 24.98564132813834 25.02843275743417 25.22945416349741 32 24.5139524896126 25.08121057833108 25.141025442014246 25.263811490042066 33 24.147922778804013 24.726512576126833 25.690846152652085 25.43471849241707 34 24.888933732789 24.86564940004036 25.9020091792014 24.343407687969243 35 25.411434159668435 24.761542561173115 25.639206676911776 24.187816602246677 36 24.12215478389552 25.333043572748014 25.49085960582212 25.053942037534345 37 25.226763529490903 25.033193109907227 25.132022166684777 24.6080211939171 38 24.20546095217398 24.946213191350648 25.727997599126578 25.120328257348795 39 25.051251403527836 24.696242943553603 25.122708433585323 25.129797219333238 40 25.170725902009178 24.774064357895718 25.81492577472149 24.24028396537361 41 24.067048529723746 25.109772693169415 26.257483325830606 24.56569545127624 42 25.229505906459078 25.432545288027196 25.5509331843136 23.787015621200126 43 24.420918644541377 24.417193151301593 25.81073459482674 25.35115360933029 44 23.95419713033535 25.04918168506129 25.651935445481026 25.344685739122337 45 24.0792081257147 25.22593564210428 25.750454044488595 24.94440218769242 46 24.006999795097663 24.881198037076974 25.87792373907446 25.233878428750906 47 24.324016663311994 24.62676488865685 26.15100984203383 24.898208605997326 48 24.75647175093008 25.44967220833786 25.263811490042066 24.530044550689993 49 23.92723904730859 25.286940593905715 25.615715372316483 25.170104986469216 50 23.694368497196564 25.728903855268577 25.47117189650569 25.10555575102917 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 38.0 1 41.0 2 44.0 3 174.5 4 305.0 5 341.5 6 378.0 7 337.0 8 296.0 9 413.0 10 530.0 11 771.0 12 1012.0 13 1745.5 14 2479.0 15 3385.5 16 4292.0 17 4955.0 18 5618.0 19 6112.0 20 6606.0 21 7850.0 22 9094.0 23 10023.0 24 10952.0 25 12935.5 26 14919.0 27 18226.0 28 21533.0 29 24914.0 30 28295.0 31 31256.5 32 34218.0 33 39039.5 34 43861.0 35 50883.5 36 57906.0 37 67194.0 38 76482.0 39 81757.0 40 87032.0 41 94237.0 42 101442.0 43 103351.0 44 105260.0 45 115309.5 46 125359.0 47 132700.5 48 140042.0 49 143517.0 50 146992.0 51 141570.5 52 136149.0 53 132676.5 54 129204.0 55 130836.5 56 132469.0 57 128422.0 58 124375.0 59 114043.5 60 103712.0 61 91205.0 62 78698.0 63 68793.5 64 58889.0 65 50623.0 66 42357.0 67 36897.5 68 31438.0 69 28484.5 70 25531.0 71 20105.5 72 14680.0 73 13254.0 74 11828.0 75 8575.0 76 5322.0 77 4865.5 78 4409.0 79 3887.0 80 3365.0 81 2711.0 82 2057.0 83 1809.5 84 1562.0 85 1247.0 86 932.0 87 693.0 88 454.0 89 303.5 90 153.0 91 93.0 92 33.0 93 21.5 94 10.0 95 10.0 96 10.0 97 7.0 98 4.0 99 4.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01588508923073739 2 0.0037772362014456985 3 6.726585016273161E-4 4 2.587148083181985E-4 5 5.17429616636397E-5 6 4.139436933091176E-4 7 5.17429616636397E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.034859233272794E-4 47 5.17429616636397E-5 48 0.0 49 0.0 50 1.034859233272794E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1932630.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.26181394882689 #Duplication Level Percentage of deduplicated Percentage of total 1 79.73090619278278 45.65536316382498 2 12.702211884157938 14.547033872984597 3 3.603861727186042 6.190909791582753 4 1.4063605900274883 3.2212303380446583 5 0.7071368594004825 2.0245969639674097 6 0.4060809484651153 1.3951759031503554 7 0.26746652854919223 1.0720933016725709 8 0.18384538564819125 0.8421856214669646 9 0.13748171845020885 0.7085207324934774 >10 0.7100358179927905 7.251515566282429 >50 0.06496298589098712 2.6407752720306554 >100 0.06711738613032169 8.330896438394918 >500 0.009353575781155634 3.565138079450303 >1k 0.0031783995372858947 2.5545649546539613 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2237 0.11574900524156202 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2177 0.11264442754174364 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2017 0.10436555367556127 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1961 0.10146794782239746 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.0348592332727941E-4 7 0.0 0.0 0.0 5.1742961663639705E-5 1.0348592332727941E-4 8 0.0 0.0 0.0 1.0348592332727941E-4 1.0348592332727941E-4 9 0.0 0.0 0.0 1.0348592332727941E-4 1.552288849909191E-4 10 0.0 0.0 0.0 1.0348592332727941E-4 1.552288849909191E-4 11 0.0 0.0 0.0 1.552288849909191E-4 1.552288849909191E-4 12 0.0 0.0 0.0 1.552288849909191E-4 2.0697184665455882E-4 13 0.0 0.0 0.0 1.552288849909191E-4 3.104577699818382E-4 14 0.0 0.0 0.0 2.0697184665455882E-4 3.104577699818382E-4 15 0.0 0.0 0.0 2.0697184665455882E-4 3.104577699818382E-4 16 0.0 0.0 0.0 2.0697184665455882E-4 3.104577699818382E-4 17 0.0 0.0 0.0 3.104577699818382E-4 3.6220073164547795E-4 18 0.0 0.0 0.0 3.6220073164547795E-4 3.6220073164547795E-4 19 0.0 0.0 0.0 4.6568665497275733E-4 3.6220073164547795E-4 20 0.0 0.0 0.0 7.244014632909559E-4 4.1394369330911764E-4 21 0.0 0.0 0.0 8.278873866182353E-4 4.6568665497275733E-4 22 0.0 0.0 0.0 0.0015005458882455514 4.6568665497275733E-4 23 0.0 0.0 0.0 0.002224947351536507 6.209155399636764E-4 24 0.0 0.0 0.0 0.003311549546472941 6.209155399636764E-4 25 0.0 0.0 0.0 0.004449894703073014 6.209155399636764E-4 26 0.0 0.0 0.0 0.005795211706327647 7.244014632909559E-4 27 0.0 0.0 0.0 0.008123644981191433 7.244014632909559E-4 28 0.0 0.0 0.0 0.014798487035800955 7.244014632909559E-4 29 0.0 0.0 0.0 0.031252748844838384 7.244014632909559E-4 30 0.0 0.0 0.0 0.06317815619130408 7.244014632909559E-4 31 0.0 0.0 0.0 0.12428659391606257 7.244014632909559E-4 32 0.0 0.0 0.0 0.19719242690013092 7.761444249545956E-4 33 0.0 0.0 0.0 0.2696325732292265 7.761444249545956E-4 34 0.0 0.0 0.0 0.35216259708273184 8.278873866182353E-4 35 0.0 0.0 0.0 0.4461278154639015 8.278873866182353E-4 36 0.0 0.0 0.0 0.5780723677061828 8.278873866182353E-4 37 0.0 0.0 0.0 0.7695213258616497 8.278873866182353E-4 38 0.0 0.0 0.0 1.0171631403838293 8.278873866182353E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4030 0.0 18.781994 1 GGCGTTA 550 0.0 16.799929 42 TACCGTC 550 0.0 16.799929 7 GTCCTAC 630 0.0 16.764437 1 AACGCAG 4630 0.0 16.345505 6 ATACCGT 555 0.0 16.252184 6 CGCAATA 630 0.0 16.063425 36 TAGGACG 590 0.0 16.033833 4 ACCGTCG 525 0.0 15.923745 8 CGTCGTA 535 0.0 15.626105 10 TAACGGC 240 3.6379788E-12 15.58327 36 CTACAGT 950 0.0 15.515725 4 TACGACG 570 0.0 15.438533 5 GATATAC 350 0.0 15.087995 1 ATACGAA 660 0.0 14.999939 40 GTGTATA 455 0.0 14.991276 1 AGGACGT 620 0.0 14.903164 5 GTATATC 370 0.0 14.864804 3 TCTAGAT 535 0.0 14.804062 2 CTAGCGG 640 0.0 14.781189 29 >>END_MODULE