##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062480_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1211528 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22830838412319 32.0 32.0 32.0 32.0 32.0 2 31.36840502241797 32.0 32.0 32.0 32.0 32.0 3 31.482916614391083 32.0 32.0 32.0 32.0 32.0 4 31.594967677181213 32.0 32.0 32.0 32.0 32.0 5 31.52233790717177 32.0 32.0 32.0 32.0 32.0 6 35.12226956372449 36.0 36.0 36.0 36.0 36.0 7 35.14845963114348 36.0 36.0 36.0 36.0 36.0 8 35.07994780145403 36.0 36.0 36.0 36.0 36.0 9 35.224217682133634 36.0 36.0 36.0 36.0 36.0 10 35.08461958782628 36.0 36.0 36.0 36.0 36.0 11 35.230213416446006 36.0 36.0 36.0 36.0 36.0 12 35.12972873924499 36.0 36.0 36.0 36.0 36.0 13 35.17247558455108 36.0 36.0 36.0 36.0 36.0 14 35.12415313554454 36.0 36.0 36.0 36.0 36.0 15 35.08581724896164 36.0 36.0 36.0 36.0 36.0 16 35.09496189935354 36.0 36.0 36.0 36.0 36.0 17 35.076208721548326 36.0 36.0 36.0 36.0 36.0 18 35.08403107480801 36.0 36.0 36.0 36.0 36.0 19 35.06939831353464 36.0 36.0 36.0 36.0 36.0 20 35.055874895173694 36.0 36.0 36.0 36.0 36.0 21 35.032893172918826 36.0 36.0 36.0 36.0 36.0 22 35.007068759450874 36.0 36.0 36.0 36.0 36.0 23 34.951161673523025 36.0 36.0 36.0 32.0 36.0 24 34.926230347131884 36.0 36.0 36.0 32.0 36.0 25 34.89019733757701 36.0 36.0 36.0 32.0 36.0 26 34.83580074088259 36.0 36.0 36.0 32.0 36.0 27 34.80567927443691 36.0 36.0 36.0 32.0 36.0 28 34.77074157592726 36.0 36.0 36.0 32.0 36.0 29 34.73622070641372 36.0 36.0 36.0 32.0 36.0 30 34.722283760672475 36.0 36.0 36.0 32.0 36.0 31 34.705173136733116 36.0 36.0 36.0 32.0 36.0 32 34.65856175012051 36.0 36.0 36.0 32.0 36.0 33 34.632378285933136 36.0 36.0 36.0 32.0 36.0 34 34.611002799770205 36.0 36.0 36.0 32.0 36.0 35 34.561081543307296 36.0 36.0 36.0 32.0 36.0 36 34.52425944757364 36.0 36.0 36.0 32.0 36.0 37 34.47498365700174 36.0 36.0 36.0 32.0 36.0 38 34.42193246875021 36.0 36.0 36.0 32.0 36.0 39 34.3280378167075 36.0 36.0 36.0 32.0 36.0 40 34.285442020324744 36.0 36.0 36.0 32.0 36.0 41 34.27511786768444 36.0 36.0 36.0 32.0 36.0 42 34.17571281885355 36.0 36.0 36.0 32.0 36.0 43 34.18094753072153 36.0 36.0 36.0 32.0 36.0 44 34.1699085782582 36.0 36.0 36.0 32.0 36.0 45 34.04551029773971 36.0 36.0 36.0 32.0 36.0 46 34.11053149411322 36.0 36.0 36.0 32.0 36.0 47 34.04924690143356 36.0 36.0 36.0 32.0 36.0 48 34.02479100771918 36.0 36.0 36.0 32.0 36.0 49 34.05216057738657 36.0 36.0 36.0 32.0 36.0 50 33.500693339320264 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 26.0 22 120.0 23 366.0 24 961.0 25 2435.0 26 5040.0 27 9389.0 28 15791.0 29 22747.0 30 31722.0 31 43886.0 32 65463.0 33 97806.0 34 211292.0 35 704474.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.19978899627111 17.143227448976475 11.42119596847492 26.235787586277493 2 15.530996205489616 20.21606505063612 37.516126875484424 26.736811868389836 3 19.19745774953055 24.036400404448937 28.37357875404965 28.392563091970864 4 12.161769536931109 15.72727287734642 35.85701008480214 36.253947500920326 5 13.778715803514242 37.24032791648232 33.962071037565785 15.01888524243765 6 34.74527516192429 35.13808652415184 16.734556421958146 13.382081891965733 7 29.97696295666543 30.314718532892787 20.755459845302664 18.952858665139118 8 28.199018099457874 33.79286322726342 19.439666272673847 18.56845240060486 9 27.26457828461249 14.052914996599336 17.90482762263852 40.777679096149654 10 15.134111634233793 27.487189730654183 32.578116230083005 24.80058240502902 11 37.85533640163496 20.596965154746734 21.85067121849433 19.697027225123975 12 23.95949577723338 23.63065484247991 29.621931973507838 22.787917406778877 13 30.65038529856512 19.370414881042784 24.878830699744455 25.10036912064765 14 23.2630199219498 19.53128611142293 25.1939699288832 32.011724037744074 15 25.47856921177224 27.381538024709297 22.759028268434573 24.380864495083895 16 25.760774823198474 25.48764865525188 24.863148024643262 23.888428496906386 17 23.819094564880054 25.958376529473526 26.218874016943893 24.00365488870253 18 25.057035413131185 24.577475716615712 27.370972854114804 22.9945160161383 19 25.358885638631545 25.874928189856117 25.033346319688853 23.73283985182348 20 25.04019717249622 24.353048381878093 26.599715400717113 24.00703904490858 21 26.004434070033877 24.870741741008047 24.069191962546473 25.055632226411607 22 24.838963688829313 25.400816159428423 24.993231687587905 24.76698846415436 23 23.845590031761542 24.91077383271373 25.286167550399163 25.95746858512556 24 24.203155024068778 25.95944955461203 25.207424013312114 24.62997140800708 25 25.162356957494996 24.69237194683078 24.929510502439893 25.215760593234325 26 23.659626521219483 25.4357307466274 26.014751619442556 24.88989111271056 27 25.203131912758103 25.35393321491538 25.381914408911722 24.061020463414796 28 24.224202824862488 24.79505219854597 25.656526303973166 25.324218672618382 29 23.814389762349695 25.275684920199947 25.986687885050948 24.923237432399418 30 24.640454038206297 25.10672473108339 26.052472580080693 24.200348650629618 31 24.425683929715202 25.051009964276517 25.197271544693972 25.32603456131431 32 24.19869784272423 25.46107064797512 25.39074623120555 24.9494852780951 33 23.992924637317504 24.87197984693709 25.853054985109715 25.28204053063569 34 24.050372752425037 25.715047444219202 26.29027145885196 23.9443083445038 35 25.30358357380102 25.106064407921235 25.855778818153603 23.73457320012414 36 24.117725714964905 25.768698701144338 25.75359380881003 24.359981775080726 37 25.224592415528157 25.35261256859107 25.34510139262155 24.077693623259222 38 24.480490752174113 25.449762613823207 25.032851077317236 25.03689555668544 39 24.856049550650088 24.807928500208 25.54914124972762 24.786880699414294 40 25.63638644752742 25.08303563764106 25.180680925244815 24.099896989586703 41 23.873983927734233 25.0783308351107 26.466907904728576 24.58077733242649 42 25.633662614483526 25.712406151570576 25.525121994704207 23.128809239241686 43 24.56303114744356 24.42609663169155 25.631681644997062 25.379190575867828 44 24.142652914336278 25.16780462358278 26.086809384512783 24.60273307756816 45 24.532738822379674 25.394955791364293 25.451578502519133 24.6207268837369 46 23.975752853430883 24.78068944568989 26.099854398262025 25.143703302617197 47 24.83989213612243 24.522028811574152 26.441672368837015 24.1964066834664 48 24.638968311091446 26.20541993251497 24.705330788888084 24.450280967505496 49 23.809354798238257 25.212128815842473 26.464431692870487 24.51408469304878 50 23.778256695888743 26.646785420382706 24.482079227289198 25.092878656439353 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 5.0 1 6.0 2 7.0 3 70.5 4 134.0 5 142.0 6 150.0 7 146.5 8 143.0 9 215.0 10 287.0 11 418.0 12 549.0 13 976.0 14 1403.0 15 1937.0 16 2471.0 17 2846.5 18 3222.0 19 3629.5 20 4037.0 21 4670.5 22 5304.0 23 5923.5 24 6543.0 25 7334.0 26 8125.0 27 11064.0 28 14003.0 29 16140.0 30 18277.0 31 20131.0 32 21985.0 33 26044.0 34 30103.0 35 34792.5 36 39482.0 37 44144.0 38 48806.0 39 51346.0 40 53886.0 41 57911.0 42 61936.0 43 64225.5 44 66515.0 45 75193.0 46 83871.0 47 90497.5 48 97124.0 49 96694.5 50 96265.0 51 90016.0 52 83767.0 53 81001.0 54 78235.0 55 78837.5 56 79440.0 57 76795.0 58 74150.0 59 67685.5 60 61221.0 61 54300.0 62 47379.0 63 41333.5 64 35288.0 65 30388.0 66 25488.0 67 22466.5 68 19445.0 69 17821.0 70 16197.0 71 12577.5 72 8958.0 73 7943.0 74 6928.0 75 5140.0 76 3352.0 77 2943.5 78 2535.0 79 2207.0 80 1879.0 81 1501.0 82 1123.0 83 944.5 84 766.0 85 613.5 86 461.0 87 322.5 88 184.0 89 122.5 90 61.0 91 37.5 92 14.0 93 11.5 94 9.0 95 8.0 96 7.0 97 6.5 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014444569172152852 2 0.0033841562060472393 3 2.476211858083346E-4 4 1.6508079053888973E-4 5 0.0 6 4.1270197634722433E-4 7 8.254039526944487E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 3.3016158107777947E-4 47 8.254039526944487E-5 48 0.0 49 0.0 50 8.254039526944487E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1211528.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.355512841228695 #Duplication Level Percentage of deduplicated Percentage of total 1 79.09950333353085 46.158920825146716 2 12.818448637644098 14.960542881573414 3 3.7347406944764785 6.538281256655444 4 1.4952632229025025 3.4902740882041594 5 0.7946207837505606 2.318525167503152 6 0.4625703118889218 1.6196116665243083 7 0.30075447056667215 1.2285476958447261 8 0.19236511883553598 0.8980452129929283 9 0.16214075836362918 0.851562639609779 >10 0.7938121639798734 8.388521281152457 >50 0.07442205677565146 3.0328795164235682 >100 0.06537630740478705 7.677758454669911 >500 0.004985116567035289 1.9584827326955299 >1k 9.970233134070578E-4 0.8780465810039291 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2735 0.2257479810619317 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2484 0.20503034184930105 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6508079053888973E-4 2 0.0 0.0 0.0 0.0 1.6508079053888973E-4 3 0.0 0.0 0.0 0.0 1.6508079053888973E-4 4 0.0 0.0 0.0 0.0 1.6508079053888973E-4 5 0.0 0.0 0.0 0.0 3.3016158107777947E-4 6 0.0 0.0 0.0 0.0 3.3016158107777947E-4 7 0.0 0.0 0.0 0.0 3.3016158107777947E-4 8 0.0 0.0 0.0 0.0 3.3016158107777947E-4 9 0.0 0.0 0.0 0.0 3.3016158107777947E-4 10 0.0 0.0 0.0 0.0 3.3016158107777947E-4 11 0.0 0.0 0.0 0.0 4.1270197634722433E-4 12 0.0 0.0 0.0 0.0 9.079443479638935E-4 13 0.0 0.0 0.0 0.0 0.0010730251385027833 14 0.0 0.0 0.0 8.254039526944487E-5 0.0010730251385027833 15 0.0 0.0 0.0 8.254039526944487E-5 0.0011555655337722281 16 0.0 0.0 0.0 1.6508079053888973E-4 0.0011555655337722281 17 0.0 0.0 0.0 1.6508079053888973E-4 0.0011555655337722281 18 0.0 0.0 0.0 4.1270197634722433E-4 0.0011555655337722281 19 0.0 0.0 0.0 6.603231621555589E-4 0.0011555655337722281 20 0.0 0.0 0.0 9.904847432333384E-4 0.0014857271148500076 21 0.0 0.0 0.0 0.0015682675101194525 0.0017333483006583422 22 0.0 0.0 0.0 0.0025587522533527906 0.0017333483006583422 23 0.0 0.0 0.0 0.004869883320897247 0.0017333483006583422 24 0.0 0.0 0.0 0.0074286355742500376 0.0017333483006583422 25 0.0 0.0 0.0 0.009244524270177825 0.0017333483006583422 26 0.0 0.0 0.0 0.011803276523530616 0.0017333483006583422 27 8.254039526944487E-5 0.0 0.0 0.014939811543769521 0.001898429091197232 28 8.254039526944487E-5 0.0 0.0 0.019974775655205657 0.001898429091197232 29 8.254039526944487E-5 0.0 0.0 0.028393895972689032 0.001980969486466677 30 8.254039526944487E-5 0.0 0.0 0.04399403067861411 0.001980969486466677 31 8.254039526944487E-5 0.0 0.0 0.07701018878639206 0.0020635098817361214 32 8.254039526944487E-5 0.0 0.0 0.11712482088734226 0.0020635098817361214 33 8.254039526944487E-5 0.0 0.0 0.1567442106166758 0.0020635098817361214 34 8.254039526944487E-5 0.0 0.0 0.20387477631552883 0.0021460502770055665 35 8.254039526944487E-5 0.0 0.0 0.25802127561228466 0.0021460502770055665 36 8.254039526944487E-5 0.0 0.0 0.3323901717500545 0.0021460502770055665 37 8.254039526944487E-5 0.0 0.0 0.44637845761715783 0.0021460502770055665 38 8.254039526944487E-5 0.0 0.0 0.592062255267728 0.0021460502770055665 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGTT 30 0.005745256 29.333086 4 TCGTATA 65 5.9316517E-7 27.076694 44 TTAGGAC 490 0.0 22.898712 3 GATATAC 445 0.0 22.747013 1 ATACCGT 235 0.0 21.53173 6 GTATAAT 170 0.0 20.710835 1 GTATTAG 330 0.0 20.67161 1 GACGTGA 465 0.0 20.343914 7 TAGGACG 620 0.0 20.225636 4 ATACACT 610 0.0 20.19655 4 ACCGTCG 240 0.0 20.166496 8 CGTCGTA 210 0.0 19.904593 10 ATTTCGT 290 0.0 19.72397 42 GATTTCG 280 0.0 19.64269 41 AATGCCG 215 0.0 19.441696 18 CTAGCGG 270 0.0 18.740582 29 CCAACGA 330 0.0 18.666508 29 CCGTCGT 225 0.0 18.57762 9 GTAGGAC 785 0.0 18.497423 3 TAGCGGC 275 0.0 18.399845 30 >>END_MODULE