##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062479_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1337206 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.087978217267946 32.0 32.0 32.0 32.0 32.0 2 30.827110407820484 32.0 32.0 32.0 32.0 32.0 3 30.807512828988205 32.0 32.0 32.0 32.0 32.0 4 30.854370231662138 32.0 32.0 32.0 32.0 32.0 5 30.70909717724868 32.0 32.0 32.0 32.0 32.0 6 34.292394739479185 36.0 36.0 36.0 32.0 36.0 7 34.18360073167485 36.0 36.0 36.0 32.0 36.0 8 34.195429126103235 36.0 36.0 36.0 32.0 36.0 9 34.311711135008366 36.0 36.0 36.0 32.0 36.0 10 34.05194412827941 36.0 36.0 36.0 32.0 36.0 11 34.31002553084566 36.0 36.0 36.0 32.0 36.0 12 34.126737391247126 36.0 36.0 36.0 32.0 36.0 13 34.2255950092955 36.0 36.0 36.0 32.0 36.0 14 34.13779552290372 36.0 36.0 36.0 32.0 36.0 15 34.10012967336372 36.0 36.0 36.0 32.0 36.0 16 34.09434597212397 36.0 36.0 36.0 32.0 36.0 17 34.02616500374662 36.0 36.0 36.0 32.0 36.0 18 34.04524508564873 36.0 36.0 36.0 32.0 36.0 19 34.02957360346873 36.0 36.0 36.0 32.0 36.0 20 34.013823599355675 36.0 36.0 36.0 32.0 36.0 21 33.989093677413955 36.0 36.0 36.0 32.0 36.0 22 33.95326598893514 36.0 36.0 36.0 32.0 36.0 23 33.91395940490845 36.0 36.0 36.0 32.0 36.0 24 33.89441940882706 36.0 36.0 36.0 32.0 36.0 25 33.43617812064858 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 13.0 4 51.0 5 134.0 6 230.0 7 67.0 8 178.0 9 236.0 10 151.0 11 43.0 12 107.0 13 72.0 14 196.0 15 305.0 16 435.0 17 714.0 18 999.0 19 1414.0 20 2204.0 21 3065.0 22 4323.0 23 5997.0 24 8103.0 25 11196.0 26 15413.0 27 20351.0 28 27402.0 29 36781.0 30 47744.0 31 65185.0 32 94220.0 33 136312.0 34 305519.0 35 548046.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.162115409209314 17.722718444278414 11.160471556791062 25.95469458972121 2 16.52471168393335 20.58061819033011 37.09702870484556 25.797641420890976 3 19.198691533708562 24.445719140432775 28.438351164950816 27.917238160907846 4 12.566575941636804 15.541504270359093 36.407363611409664 35.48455617659444 5 14.319399849782904 36.70795641908774 33.81403302980702 15.158610701322328 6 33.19045559766987 35.673894599176705 17.36312392729471 13.772525875858726 7 29.167570900676942 30.923456154503537 21.39315396323896 18.515818981580566 8 27.73203716067531 32.6844486226419 20.332535949630103 19.250978267052684 9 27.352243703945454 14.439979759206418 19.039670158902204 39.16810637794592 10 15.538573153812694 26.888264797687384 32.07203187107817 25.50113017742176 11 37.073282855395156 21.490559158092083 22.378901988794826 19.057255997717938 12 24.036629098552464 24.19814877632183 29.370073256699474 22.395148868426233 13 29.193186948614606 19.956379580013074 25.614156196443133 25.236277274929193 14 23.150512925912697 19.974422963027855 25.6027188330402 31.272345278019248 15 24.899676569238142 27.201575227599424 23.21349425011979 24.685253953042647 16 25.191246030213055 26.09518205244536 24.489299355999865 24.224272561341724 17 23.445619131762978 25.767082466044716 26.254511148714414 24.53278725347789 18 24.252954896873444 24.92506523798292 27.396433532136022 23.42554633300761 19 24.894792175233555 25.556365934530035 26.103596385343693 23.445245504892725 20 24.972334324156364 24.545781265208635 26.4171639500146 24.0647204606204 21 25.879501400597977 24.646106592207715 24.902489777244643 24.57190222994966 22 24.88552534020356 25.19206428854954 25.641724646690083 24.280685724556818 23 23.803868150104055 24.787118447587815 26.050741107126356 25.35827229518177 24 23.798605411816858 25.687784174299562 25.991876883263142 24.521733530620434 25 24.185218659044942 25.08946214884375 25.932828696177634 24.792490495933674 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 168.0 1 168.0 2 527.5 3 887.0 4 887.0 5 887.0 6 2563.0 7 4239.0 8 4239.0 9 4239.0 10 4429.0 11 4619.0 12 4619.0 13 4619.0 14 4666.0 15 4713.0 16 4713.0 17 4713.0 18 7979.0 19 11245.0 20 11245.0 21 11245.0 22 17703.5 23 24162.0 24 24162.0 25 24162.0 26 35327.5 27 46493.0 28 46493.0 29 46493.0 30 57136.5 31 67780.0 32 67780.0 33 67780.0 34 80012.5 35 92245.0 36 92245.0 37 92245.0 38 102481.0 39 112717.0 40 112717.0 41 112717.0 42 126345.0 43 139973.0 44 139973.0 45 139973.0 46 160611.0 47 181249.0 48 181249.0 49 181249.0 50 174623.5 51 167998.0 52 167998.0 53 167998.0 54 153649.0 55 139300.0 56 139300.0 57 139300.0 58 126733.0 59 114166.0 60 114166.0 61 114166.0 62 101690.5 63 89215.0 64 89215.0 65 89215.0 66 75323.0 67 61431.0 68 61431.0 69 61431.0 70 47507.0 71 33583.0 72 33583.0 73 33583.0 74 26595.0 75 19607.0 76 19607.0 77 19607.0 78 15890.0 79 12173.0 80 12173.0 81 12173.0 82 8746.5 83 5320.0 84 5320.0 85 5320.0 86 3858.0 87 2396.0 88 2396.0 89 2396.0 90 1593.5 91 791.0 92 791.0 93 791.0 94 474.5 95 158.0 96 158.0 97 158.0 98 368.0 99 578.0 100 578.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007702627717793668 2 0.00336522570194869 3 0.005085229949611354 4 0.014881775881950873 5 0.035447044060526206 6 0.04726272541403494 7 0.06730451403897379 8 0.08749586825066594 9 0.09646980345586245 10 0.11778289956820415 11 0.11763333398145087 12 0.1319916303097653 13 0.11912898984898362 14 0.12212030158404914 15 0.1141185426927489 16 0.11157592771794324 17 0.12159682203041267 18 0.12795335946742686 19 0.13116901958262228 20 0.12084899409664629 21 0.12750466270716704 22 0.1477707997122358 23 0.13752555701963648 24 0.13146815075612883 25 0.1290003185746998 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1337206.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.21870784455784 #Duplication Level Percentage of deduplicated Percentage of total 1 77.38168284632322 40.40771489072385 2 13.757022509174647 14.367478784351938 3 4.145398785370721 6.494021042173759 4 1.6494963075551254 3.4453826309959212 5 0.822751158990867 2.1481501200057727 6 0.48212167372934545 1.5105462495601159 7 0.302168554381783 1.1045196022752304 8 0.21934072702718632 0.9162951474436444 9 0.14713997266583634 0.6915113320404181 >10 0.8769913116499892 8.717319657904962 >50 0.10555942437615232 3.890632958758449 >100 0.09899278715466871 10.623978076889928 >500 0.008177654066119103 2.8197235931416693 >1k 0.0031562875342915834 2.8627259137342436 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 3926 0.29359724679667903 No Hit GTATCAACGCAGAGTACTTTTTTTT 3695 0.2763224215266758 No Hit TCCATGTACTCTGCGTTGATACCAC 3368 0.2518684480925153 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2791 0.20871877631419541 No Hit TATCAACGCAGAGTACTTTTTTTTT 2444 0.1827691470125022 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2211 0.16534475615574562 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1716 0.12832727343431005 No Hit GAGTACATGGAAGCAGTGGTATCAA 1715 0.12825249064093341 No Hit CATGTACTCTGCGTTGATACCACTG 1502 0.11232375565170961 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 7.478279337663756E-5 0.0 8 0.0 0.0 0.0 7.478279337663756E-5 0.0 9 0.0 0.0 0.0 1.495655867532751E-4 0.0 10 0.0 0.0 0.0 1.495655867532751E-4 0.0 11 0.0 0.0 0.0 1.495655867532751E-4 0.0 12 0.0 0.0 0.0 2.2434838012991266E-4 0.0 13 0.0 0.0 0.0 2.2434838012991266E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTTAC 75 5.8184014E-8 15.205276 18 GATATAC 165 0.0 14.383845 1 CGCGCTA 70 7.2403363E-6 13.575121 16 ACGCTTA 80 1.9910276E-6 13.067033 17 CTCGACG 90 5.3901385E-7 12.669165 13 TAACACC 55 0.0030729962 12.088312 4 CATTATA 95 1.0463482E-6 11.993381 2 GTCCTAA 200 0.0 11.8666725 1 CGAACCT 235 0.0 11.726594 16 CGTTCAA 65 8.008864E-4 11.6946125 14 CGTCTAT 65 8.0694695E-4 11.684109 1 GACGCTT 90 7.4356885E-6 11.614271 16 CGACGCT 90 7.4449963E-6 11.612966 15 GCATCGC 190 0.0 11.502267 14 CGTTATT 100 1.9415638E-6 11.393712 2 TTTCGGA 160 4.5474735E-11 11.285165 17 CGACCAT 160 4.5474735E-11 11.282206 10 TTCGGAA 170 1.0913936E-11 11.180349 18 CCGAATC 60 0.0058646738 11.085934 19 GACCATA 180 3.6379788E-12 11.0838585 11 >>END_MODULE