##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062479_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1337206 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.203303754245795 32.0 32.0 32.0 32.0 32.0 2 31.320104755736963 32.0 32.0 32.0 32.0 32.0 3 31.430156610125888 32.0 32.0 32.0 32.0 32.0 4 31.54809356224845 32.0 32.0 32.0 32.0 32.0 5 31.462082880274245 32.0 32.0 32.0 32.0 32.0 6 35.03153515613899 36.0 36.0 36.0 36.0 36.0 7 35.04204064295254 36.0 36.0 36.0 36.0 36.0 8 34.96827040859823 36.0 36.0 36.0 36.0 36.0 9 35.116199000004485 36.0 36.0 36.0 36.0 36.0 10 34.98032763837434 36.0 36.0 36.0 36.0 36.0 11 35.12884551819241 36.0 36.0 36.0 36.0 36.0 12 35.03066468442409 36.0 36.0 36.0 36.0 36.0 13 35.07813904514338 36.0 36.0 36.0 36.0 36.0 14 35.038013589529214 36.0 36.0 36.0 36.0 36.0 15 34.997761750994236 36.0 36.0 36.0 36.0 36.0 16 35.01392006915913 36.0 36.0 36.0 36.0 36.0 17 34.992817860524106 36.0 36.0 36.0 36.0 36.0 18 35.00536716108064 36.0 36.0 36.0 36.0 36.0 19 34.97465835480846 36.0 36.0 36.0 36.0 36.0 20 34.96088485992435 36.0 36.0 36.0 32.0 36.0 21 34.9506650433815 36.0 36.0 36.0 32.0 36.0 22 34.93916868455571 36.0 36.0 36.0 32.0 36.0 23 34.90105189477163 36.0 36.0 36.0 32.0 36.0 24 34.87510600460961 36.0 36.0 36.0 32.0 36.0 25 34.858155736662866 36.0 36.0 36.0 32.0 36.0 26 34.822402830977424 36.0 36.0 36.0 32.0 36.0 27 34.80559016337049 36.0 36.0 36.0 32.0 36.0 28 34.78392633595721 36.0 36.0 36.0 32.0 36.0 29 34.7649681500083 36.0 36.0 36.0 32.0 36.0 30 34.743418740268886 36.0 36.0 36.0 32.0 36.0 31 34.7434942708902 36.0 36.0 36.0 32.0 36.0 32 34.70475753174904 36.0 36.0 36.0 32.0 36.0 33 34.68191064054454 36.0 36.0 36.0 32.0 36.0 34 34.66553470445092 36.0 36.0 36.0 32.0 36.0 35 34.629994181898674 36.0 36.0 36.0 32.0 36.0 36 34.600665118164294 36.0 36.0 36.0 32.0 36.0 37 34.59216156672944 36.0 36.0 36.0 32.0 36.0 38 34.5455434689943 36.0 36.0 36.0 32.0 36.0 39 34.536826786598326 36.0 36.0 36.0 32.0 36.0 40 34.51474567119801 36.0 36.0 36.0 32.0 36.0 41 34.4823265824413 36.0 36.0 36.0 32.0 36.0 42 34.445916336002085 36.0 36.0 36.0 32.0 36.0 43 34.43157972668385 36.0 36.0 36.0 32.0 36.0 44 34.415183599236016 36.0 36.0 36.0 32.0 36.0 45 34.34472100783275 36.0 36.0 36.0 32.0 36.0 46 34.35982563643896 36.0 36.0 36.0 32.0 36.0 47 34.3248317761063 36.0 36.0 36.0 32.0 36.0 48 34.27652956986433 36.0 36.0 36.0 32.0 36.0 49 34.26368113813429 36.0 36.0 36.0 32.0 36.0 50 33.695974292666946 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 6.0 21 27.0 22 93.0 23 340.0 24 890.0 25 2082.0 26 4344.0 27 8333.0 28 13947.0 29 22109.0 30 33177.0 31 48721.0 32 72442.0 33 119648.0 34 251356.0 35 759690.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.84807032529112 18.287612370202552 11.562939654611451 26.301377649894874 2 16.091552587396375 21.133974744887464 36.634197232183254 26.140275435532907 3 18.705849976293784 24.85099483847616 28.71480898173948 27.728346203490574 4 12.550889767006382 16.058133239206583 36.329385793042796 35.06159120074424 5 14.110914847824493 36.97949306240026 33.599834281329876 15.30975780844537 6 33.44426180715197 36.0402124442304 16.961586840542687 13.553938908074944 7 29.388815186291417 31.015490507820036 21.212064558489864 18.38362974739868 8 27.98230040846362 32.861728110702465 19.992357198516906 19.16361428231701 9 27.59769250212757 14.233708194548933 18.656437377636653 39.51216192568685 10 15.713734458265966 26.989558826388755 31.914304901413843 25.382401813931438 11 37.43170461394879 21.415174625300814 22.124190289304714 19.028930471445683 12 24.187671906946274 24.21579023725589 29.098358816816557 22.498179038981277 13 29.518114636039623 19.905235244233126 25.402069688589492 25.174580431137763 14 23.353918543590144 19.915704835305853 25.265217176710248 31.46515944439376 15 25.13786207958983 27.346272750795315 22.83088768671394 24.684977482900912 16 25.598972783550177 26.062177405725073 24.197019756118355 24.141830054606395 17 23.68490718707514 25.950751043593883 25.7848828078845 24.57945896144648 18 24.528831010330496 25.2231144640392 26.80364880205443 23.444405723575873 19 25.23597710449998 25.7976706655519 25.47640378520587 23.489948444742247 20 25.462045488877553 24.652521750575453 25.72393483128254 24.161497929264453 21 26.289143183623164 24.724612363390534 24.36086885640657 24.625375596579737 22 25.162241270230616 25.30672162703428 25.15767951983464 24.373357582900464 23 24.078862942583267 24.898258009611084 25.509457779878343 25.513421267927306 24 24.202628465621604 25.95254583063492 25.3201077470487 24.52471795669478 25 24.707187972533777 25.067715819402547 25.372680050792475 24.852416157271207 26 23.799773557701656 25.78420976274411 25.91829531126842 24.497721368285813 27 25.029427029193705 25.61243368635797 25.232985792764918 24.125153491683406 28 24.046481993051184 25.28757723192986 25.80851417059152 24.85742660442744 29 23.981495745606885 25.673680794133443 25.79445500543671 24.550368454822966 30 24.54722757750115 25.595981471815115 25.763195797805277 24.093595152878464 31 24.28204779218759 25.59358842242706 25.084018468358654 25.040345317026695 32 24.1363709106899 25.876416946977503 25.137263817242818 24.849948325089777 33 24.039377627680402 25.21443966000751 25.615798912059923 25.130383800252165 34 24.267913844239406 25.644590287509928 25.924502283118684 24.162993585131982 35 25.240164940929073 25.38673921594728 25.393768798524686 23.979327044598964 36 24.02202801961702 26.05731652415559 25.317041652520256 24.603613803707134 37 25.075044533153456 25.863030826963083 25.0406444482002 24.021280191683257 38 24.251312064109793 25.651993784054216 25.291615502772196 24.805078649063795 39 24.453150823433337 25.57048053927368 25.130907279805804 24.845461357487178 40 25.07093147951774 25.638009401692784 25.293185941433105 23.997873177356368 41 23.855187607593745 25.793931525883075 26.002650302197267 24.348230564325917 42 25.381205289237407 26.05522260594104 25.107724613859045 23.4558474909625 43 24.425481189883982 25.149827326530094 25.57908056051199 24.84561092307393 44 24.155664871381074 25.61647195720031 25.43101062962625 24.796852541792365 45 24.42570553826411 26.020373824227534 25.309264242009082 24.244656395499273 46 24.17084577843653 25.37858789146923 25.415081894637026 25.035484435457217 47 24.499067458566593 25.084616730705665 25.93168143128284 24.484634379444902 48 24.82669087634964 26.206283848561853 24.7733707446721 24.193654530416406 49 23.96272526446935 25.70852957584695 25.81950724121788 24.509237918465814 50 23.909704263965313 26.390623434235266 24.830803929985358 24.868868371814067 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 13.0 2 13.0 3 43.0 4 73.0 5 86.0 6 99.0 7 126.5 8 154.0 9 200.0 10 246.0 11 386.0 12 526.0 13 892.5 14 1259.0 15 1871.5 16 2484.0 17 3196.5 18 3909.0 19 4454.0 20 4999.0 21 6297.5 22 7596.0 23 8507.0 24 9418.0 25 10829.0 26 12240.0 27 14785.0 28 17330.0 29 20047.0 30 22764.0 31 24968.5 32 27173.0 33 30791.5 34 34410.0 35 39577.5 36 44745.0 37 51344.0 38 57943.0 39 60708.0 40 63473.0 41 68018.0 42 72563.0 43 73049.5 44 73536.0 45 81526.0 46 89516.0 47 94801.5 48 100087.0 49 99739.0 50 99391.0 51 93203.0 52 87015.0 53 84021.5 54 81028.0 55 81447.0 56 81866.0 57 80103.5 58 78341.0 59 72143.5 60 65946.0 61 58005.5 62 50065.0 63 44239.5 64 38414.0 65 33119.5 66 27825.0 67 25617.5 68 23410.0 69 21802.5 70 20195.0 71 16172.5 72 12150.0 73 10870.5 74 9591.0 75 7321.0 76 5051.0 77 4439.5 78 3828.0 79 3282.5 80 2737.0 81 2132.5 82 1528.0 83 1274.5 84 1021.0 85 863.5 86 706.0 87 531.5 88 357.0 89 229.5 90 102.0 91 70.0 92 38.0 93 25.5 94 13.0 95 11.0 96 9.0 97 6.5 98 4.0 99 5.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016377431749483626 2 0.0038139224622085154 3 2.991311735065502E-4 4 1.495655867532751E-4 5 0.0 6 5.982623470131005E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1337206.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.94254179429935 #Duplication Level Percentage of deduplicated Percentage of total 1 77.48855545264254 42.57418196536696 2 13.894603464399188 15.268096631159377 3 4.13157123888195 6.8099707640519 4 1.6223018827405855 3.565335559817805 5 0.8027984765535132 2.205389442522062 6 0.44982134607291163 1.482859686394736 7 0.2803866870913426 1.078361009185686 8 0.19708116007497647 0.8662511899430717 9 0.1389426689753761 0.6870477057471991 >10 0.8080897023614919 8.420034727552162 >50 0.09032593360109335 3.458380678366883 >100 0.08732269177584903 9.788185985417588 >500 0.006286126035703275 2.3336888753362666 >1k 0.0019131687934749097 1.4622157791382082 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3071 0.22965795845965395 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2524 0.1887517704826332 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 1.495655867532751E-4 0.0 9 0.0 0.0 0.0 2.2434838012991266E-4 0.0 10 7.478279337663756E-5 0.0 0.0 2.2434838012991266E-4 0.0 11 7.478279337663756E-5 0.0 0.0 2.2434838012991266E-4 0.0 12 7.478279337663756E-5 0.0 0.0 3.739139668831878E-4 0.0 13 7.478279337663756E-5 0.0 0.0 3.739139668831878E-4 0.0 14 7.478279337663756E-5 0.0 0.0 3.739139668831878E-4 0.0 15 7.478279337663756E-5 0.0 0.0 4.486967602598253E-4 0.0 16 7.478279337663756E-5 0.0 0.0 4.486967602598253E-4 0.0 17 7.478279337663756E-5 0.0 0.0 4.486967602598253E-4 0.0 18 7.478279337663756E-5 0.0 0.0 4.486967602598253E-4 0.0 19 7.478279337663756E-5 0.0 0.0 4.486967602598253E-4 0.0 20 7.478279337663756E-5 0.0 0.0 4.486967602598253E-4 0.0 21 7.478279337663756E-5 0.0 0.0 5.234795536364629E-4 0.0 22 1.495655867532751E-4 0.0 0.0 5.982623470131005E-4 0.0 23 1.495655867532751E-4 0.0 0.0 7.478279337663756E-4 0.0 24 1.495655867532751E-4 0.0 0.0 0.0010469591072729259 0.0 25 1.495655867532751E-4 0.0 0.0 0.0012713074874028385 0.0 26 1.495655867532751E-4 0.0 0.0 0.0014956558675327512 0.0 27 1.495655867532751E-4 0.0 0.0 0.0019443526277925765 0.0 28 1.495655867532751E-4 0.0 0.0 0.0035147912887019653 0.0 29 1.495655867532751E-4 0.0 0.0 0.007179148164157205 0.0 30 1.495655867532751E-4 0.0 0.0 0.012114812527015285 0.0 31 1.495655867532751E-4 0.0 0.0 0.025426149748056768 0.0 32 1.495655867532751E-4 0.0 0.0 0.045393155579618996 0.0 33 1.495655867532751E-4 0.0 0.0 0.06528537861780459 0.0 34 1.495655867532751E-4 0.0 0.0 0.09355327451417358 0.0 35 1.495655867532751E-4 0.0 0.0 0.1298229293018428 0.0 36 1.495655867532751E-4 0.0 0.0 0.17910479013704694 0.0 37 1.495655867532751E-4 0.0 0.0 0.2616649940248548 0.0 38 1.495655867532751E-4 0.0 0.0 0.36748264665279695 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGACG 165 0.0 23.999857 13 ACGCTTA 180 0.0 23.222084 17 TCGACGC 200 0.0 21.99987 14 CATACGT 65 4.9327366E-4 20.307573 31 GACGCTT 195 0.0 20.307571 16 TACCGTC 330 0.0 19.999882 7 CCTCGAC 205 0.0 19.31696 12 ATACCGT 335 0.0 19.044662 6 CGCTTAC 210 0.0 18.85703 18 CGTGCAC 230 0.0 18.173803 36 GATATAC 260 0.0 17.773113 1 AGCGCGT 225 0.0 17.599895 32 TACGTTG 100 2.483459E-5 17.599895 33 CGTCGTA 310 0.0 17.032156 10 CAAGACG 530 0.0 17.018768 4 TAACGCC 440 0.0 16.999899 4 ACCGTCG 365 0.0 16.876612 8 ATAACGC 460 0.0 16.73903 3 TACGCTA 370 0.0 16.648548 9 AAGACGG 545 0.0 16.55036 5 >>END_MODULE